LOCUS BK013522 3944 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.2_22 genomic sequence, sequence. ACCESSION BK013522 VERSION BK013522.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.2_22 ORGANISM ssRNA phage Gerhypos.2_22 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Dugnivirus; Dugnivirus chthonadaptatum. REFERENCE 1 (bases 1 to 3944) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3944) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN032727.1 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3944 /organism="ssRNA phage Gerhypos.2_22" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786255" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Dugnivirus; Dugnivirus Gerhypos.2_22" gene 107..1393 /gene="Gerhypos.2_22_1" CDS 107..1393 /gene="Gerhypos.2_22_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50426.1" /translation="MANYLYSRNFWRFDTIQTFGPDSSLTNSIDAGSIQIDRGSSGGQ NPAWRSQVANHKNATTEFSAHRFRVSGSTSGYASYSLQSISPASDSQEIKRVSQGDLI DASDITLLDSFSDASLESEVTNRAALGFILACKNELRSFQGGVFLGELRETIHMLKNP ARSFRRALDFYSRDVNRRLKSRGLRRGIRPSPAKISDLNKVVSDTWLEHSFGWQPFLS DIRSAGAAFVELALKPLEIKIARYRYSKDVTDPVYTEIQYRKILQNGIAYIVRRVPSV GYSTWYKGAVKVQVNSPLQLGENVLGFAPSDFFPTIWELIPYSFLVDYFTNIGQVIEA WSFPMGNIAWHFRTQRRYRKMVLTAEFDMTPYNPNPGLWTWQNASGSSFKVDMDNTIL SRDAIPIGIPTFQFRVPGSSLKWMNIAALAHMRFPS" gene 1455..1922 /gene="Gerhypos.2_22_2" CDS 1455..1922 /gene="Gerhypos.2_22_2" /codon_start=1 /product="coat protein" /protein_id="DAD50427.1" /translation="MSISLSSPVTGGAQTGLTTPTYTVITDTAPGTNGKQYAVTALGG TQAGVRVHSASDPFTVTFERPVTVKQAPIPNPVTGVIGNVPRNSYKARVRKGVLPAVG QNPQVMLHTLVSDVPAGGDLADPANVRAGTSLLIGALSQQSQGYGDMLIQAVI" gene 1948..2241 /gene="Gerhypos.2_22_3" CDS 1948..2241 /gene="Gerhypos.2_22_3" /codon_start=1 /product="hypothetical protein" /protein_id="DAD50428.1" /translation="MNFLRLTVYTVGAGNEFATYVDSLSRDLDFVLYSTFICDAEEVL YVSDGDSSSLTIELRAWIFQVPALLIVDDLIMIVRYLKSMPVVVFSRIDCGLM" gene 2252..3925 /gene="Gerhypos.2_22_4" CDS 2252..3925 /gene="Gerhypos.2_22_4" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50429.1" /translation="MGIHPDALFSILLEDLECYLSRDDMSGAASRSLKTSFYKKFVAN EALDAEEKALDKFSTINHRMRNFEIDSSLAESNSFIERLKTVLWKFEARANLGCLSYD HIFDRARTGPGAAIRARGGDFYTKVFDSPLSCTSESLLSAYRRITGRSARWFLAEHSR SSQYPLDFIVEGNTIASVPKTNEIRRTICIEPNINMMFQLGLGSYIESELRKQYSLDL AIQPDKNRELARRGSIDGSFGTIDLESASDSLCYSVLSKLFDRHFFGWLSRLRSPVSS FRDGSQTKLYMVSTMGNGFTFPLQTLLFAGCVIATALEEGKPISFGRLTSRSFGVFGD DIIVPYDLYDATVRNLELLGFKVNSSKSFNSGPFRESCGHDYHLGVNIRGVYAKSLHT MQDRFVLVNRLNDFTSRTGIPVRGAVKMLLSSVRFTPVPLGENDDAGIKVPRIYLKKF LIDKHTQSIRYTRFVAKSNDLVFPENGEPFTPKGEKKRSLNVDGAYLSFLQGSIRGHR CSVRLDRVRYSPKRGVSPNWDFTPMGSGATKPRMGLTPVELAYLLNCED" ORIGIN 1 gccccgttcg gggcctctcg gtttgtctgc gttaaagcag ccaaattgtt agggcttcga 61 caagtctctc ttccccgtgg tgtaactaac atggagctag cgcattatgg ctaattacct 121 ttattctcgc aacttctggc gttttgacac tattcagacc ttcgggcctg attcttccct 181 taccaactct atcgatgctg gttctatcca gatcgatcga ggtagttcgg gtggtcaaaa 241 cccagcgtgg cgtagtcagg tagctaacca taagaatgcg acgactgagt tttctgctca 301 tcgtttccga gtctccgggt ctacttcggg gtatgcgtcg tactctcttc agagtatttc 361 gcctgcctcg gatagtcagg agatcaagcg ggttagtcag ggcgacttaa ttgacgcttc 421 tgatattacc ttacttgatt ctttctcgga tgctagctta gagtctgaag ttacaaatag 481 agccgctctt ggatttatcc tagcttgcaa gaatgaactt cgctcttttc agggtggagt 541 ttttcttggt gagcttaggg aaacaatcca tatgttaaag aatccggcgc gatcctttcg 601 tcgagccctt gacttttatt ctagagacgt taatcgtcgt ctaaaaagcc gaggccttcg 661 tcgagggatt cgtcccagcc ctgctaagat ttctgatctt aataaggttg tgtcggatac 721 ctggttagag catagttttg gttggcagcc gtttctttct gatatcagat cggccggcgc 781 tgccttcgtg gaacttgctc taaaacctct cgaaattaaa atcgcgaggt accgttattc 841 caaagatgta actgaccctg tgtacactga aatacagtat aggaagatcc tccaaaatgg 901 gatcgcctac attgtccgac gtgtaccttc ggttggttat tctacctggt ataaaggtgc 961 agttaaggtg caggtaaact ctcccttgca gttgggtgaa aacgttttag gcttcgcgcc 1021 tagcgatttc tttccgacta tttgggagct tataccctat tcctttcttg tcgattactt 1081 taccaatatt ggtcaggtaa tcgaagcgtg gtccttccct atgggcaaca tagcgtggca 1141 ttttcgaact cagcgtcggt accgtaaaat ggtgcttact gctgagtttg atatgacacc 1201 ctataatccc aatccgggct tatggacgtg gcagaacgcg agtggctctt catttaaggt 1261 cgatatggac aacacaatat tgtctagaga tgctatacct atcggtatcc cgacttttca 1321 atttcgggtt cccggttcat ccttaaaatg gatgaatata gcagctctgg ctcatatgcg 1381 tttccccagt tgactctcat caacctaata gatagtgctg ggaagcacga ttctatacac 1441 ggagtattaa actcatgtcg atttccctct cttcacctgt cacgggtggt gcccagacag 1501 gacttactac acccacctat acggtgatta ctgatacggc gcctggtaca aacggaaaac 1561 agtatgcggt taccgccctt ggcggaacgc aagctggtgt tcgtgtgcac tcggcgtcgg 1621 accctttcac ggttacgttt gaaagaccgg tgactgttaa acaggcaccg atcccaaacc 1681 ccgttactgg tgtaatcggt aatgtccctc gcaattccta caaggcgcgc gtccgaaagg 1741 gcgttctccc tgcagtcggt caaaaccctc aggttatgtt gcacactctt gtgagcgacg 1801 ttcctgcggg tggagacctg gccgatccgg ccaatgtgag ggcaggtacc agtcttttga 1861 ttggtgcctt gtcacaacag tcccagggtt atggtgatat gcttattcaa gccgtcattt 1921 gatccctgct tcatccgtga ggttgaaatg aacttcttac gtcttaccgt ctatactgtt 1981 ggcgcgggta acgaatttgc tacctacgtt gactccctat ctcgtgacct agacttcgtc 2041 ctctacagca catttatttg tgatgcggaa gaagtccttt atgtctctga tggggatagt 2101 tcatctctaa caatcgagct tcgtgcctgg attttccagg tgcccgcttt attgatagtt 2161 gatgacctaa ttatgatagt tcgatatttg aagtccatgc ctgttgtggt ctttagtcgt 2221 atagactgtg gcctaatgta gaggagtcct tatgggtatt caccctgatg ctcttttttc 2281 tatccttctg gaagatctcg agtgttatct ctcgcgagat gacatgtccg gggctgcttc 2341 tcgttcgtta aagacctcgt tctacaagaa atttgtagct aatgaggccc ttgacgccga 2401 ggagaaagct ttggataagt tttcaacgat taatcatcgt atgagaaact ttgagatcga 2461 ctcgtcctta gctgagtcta attccttcat cgaacgtttg aaaaccgttc tgtggaagtt 2521 tgaggcaagg gctaaccttg ggtgtttgtc gtacgatcat atttttgatc gtgcacgaac 2581 tgggccaggg gcagctattc gggctagagg cggtgacttt tatacaaaag tcttcgactc 2641 tcctcttagt tgtactagcg agtcactcct ttccgcctat cggcggatta cgggtcgtag 2701 tgctagatgg tttttagcgg agcattctcg ctccagccag tacccactcg actttattgt 2761 ggaaggaaac actattgctt ctgttcctaa aactaacgag atacgccgca ccatatgtat 2821 cgagcctaac atcaatatga tgtttcagct cggtctcggt tcttatatcg agtctgaact 2881 gcgaaagcag tactctctcg atctggccat ccagccagat aagaatcgtg agcttgctag 2941 acgcggtagc atagatggat ctttcggtac aatcgattta gaaagtgcct cggattctct 3001 gtgctactct gtcctttcga agctgtttga tcgccacttt ttcgggtggc tctctaggct 3061 tcgaagtccg gtgtcgtctt ttcgagacgg ctctcagacg aagctctata tggtctctac 3121 aatggggaat ggttttacat ttcccttgca gacccttctt tttgcggggt gtgtcattgc 3181 tactgcgttg gaggagggga aacccatctc tttcggtcgt ttaacctcaa gatccttcgg 3241 agtctttggt gacgatatca ttgtgccata cgatctgtat gacgcgacgg ttcgaaacct 3301 ggagctcctg ggatttaagg ttaatagtag caagtccttt aactcgggac cgttcagaga 3361 gtcctgcgga catgactacc atttaggtgt caatatccgt ggtgtgtacg cgaaaagctt 3421 acatactatg caggatcgct ttgtccttgt caatcgtctt aatgacttca cgtcacgaac 3481 aggtattcct gtaaggggtg ctgtcaagat gctcctttct tcggtcaggt ttacacctgt 3541 cccgttgggg gagaacgacg atgccggtat taaggtacct cgaatatatc ttaagaagtt 3601 cttgatcgat aaacatacgc aatcaattcg ctatacgcgt tttgttgcta agtctaacga 3661 tcttgtgttt cctgagaatg gcgagccttt taccccgaag ggtgaaaaga aacgttcact 3721 taacgtggat ggtgcttatc tctccttctt acaaggtagt attagagggc atcggtgctc 3781 ggtcaggctt gatcgagtac ggtactctcc gaagcgcggc gtaagtccca actgggattt 3841 tacgccaatg ggatccgggg cgactaagcc tcggatggga ttaacgccag tggaactggc 3901 gtatctacta aactgtgaag attagtagat aagtcctggg gtcg //