LOCUS BK013790 3921 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.2_23 genomic sequence. ACCESSION BK013790 VERSION BK013790.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.2_23 ORGANISM ssRNA phage Gerhypos.2_23 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Pujohnavirus; Pujohnavirus chthonenecus. REFERENCE 1 (bases 1 to 3921) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3921) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN034474 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3921 /organism="ssRNA phage Gerhypos.2_23" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786256" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Pujohnavirus; Pujohnavirus Gerhypos.2_23" gene 82..1164 /gene="Gerhypos.2_23_1" CDS 82..1164 /gene="Gerhypos.2_23_1" /codon_start=1 /product="maturation protein" /protein_id="DAD51336.1" /translation="MPSRTRSSNSSRFKGTTGRFGSVSGGGTILSSSHACDDIVGSGD NAPFSVTHITLDGGVINKPNTGFFSSWFNNYVADVLDVPANFGHLGIIDDISNVDAAT QAAARTNPSRPYVDTITEVLQLHELTDLLHRNGSSIISRYGQKNLGLQFGLLPIVEDI DGILNFSDQVHNRVQEINRLKERGLRRTVSCGSFGASSKQNLFIQTQNTFIRDDFDVS TTLNVRAHCRWLPTGDPSILSSPREVRELARRAVQGITMDASTAWELMPWSWLLDWAG NVGQYFAAHRNIVPAVLSDVSVMRHTRTSWSWKGTHFDDVTVTPINVRRESKTRATSF TAPIAHFPFLSGNQMGILASLAVARL" gene 1203..1574 /gene="Gerhypos.2_23_2" CDS 1203..1574 /gene="Gerhypos.2_23_2" /codon_start=1 /product="coat protein" /protein_id="DAD51337.1" /translation="MFADPQTLTVNAVAKAVVRINQDQYSSEYLLRSSLDEFRLTIRN TSYLDKKRNVMIDRHNVEFVHTVFPVSPATLSIVRKVYTVIENQQGDTLTDPTYVASA LFAWLTASSNANITKLMNFES" gene 1634..3625 /gene="Gerhypos.2_23_3" CDS 1634..3625 /gene="Gerhypos.2_23_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51338.1" /translation="MKSQESALLHVVRGVCKDVLAAYPAIEGLGLDIERLALYCQTRG LALFTLDLPNLDSLLLSGLESGRLQLSGPLSRRVSKRVKVPRLFSGLWLRVFDREACL RQDADVTSIFFLRQLCCIGKKLEVECTPDRIATTLEAYHDIEESIRRPTLGWEFDELD DGCQLDSIHLVQALDGTPFNNEDLPLFSSKIEKSEKEVKAKREDRILLVRVQQVADLI LGTFDFFDPIEYSAQLESEAKGIGFKHGPGAVAEKRKNWEKSTFLHWPAKLERLFPFK LCGTTAGFEGEVPLNHEGSSVLYCVPKTAKGPRLIAAEPASHMWCQKCIESFLRYQFK KHFGESFIDLNDQTKSGALVLQASRDRLLATVDLSDASDRLSCWTVERIFRKHSSLLY HLHAARTRLLRDNISKDKDSFIKLKKFATQGTACTFPVQSLVFLCIALASSIEGNITW HKIRGLRTQVRVYGDDIIIPSHGYARLNRIMVALGLKVNIAKSYVNGHFRESCGVEGY RGYDVTPVKPKTLIADSPASCQAVVDTSNNLFNKGLWYASDSLRAFLPARLRRGIRIV GINDAGFAGLTSYSGSDESHLAKRWNSRLHRYEVRVWTLLVRTQERDRQGLPALLDFF ASKHNHEHARIVSEYRDVRKTRDGFLWEPLNTGARLRDT" gene 3573..3836 /gene="Gerhypos.2_23_4" CDS 3573..3836 /gene="Gerhypos.2_23_4" /codon_start=1 /product="hypothetical protein" /protein_id="DAD51339.1" /translation="MVFYGSPLTLALAYVILNKDIGIEDHIDHQLQNRGFFTLEVRDK EAMGVAYGSIISANEYQEALSYLHEDSFLEGGQVKNSKEFYAR" ORIGIN 1 ccgtcctggc acctcgcatg tctttcacgt gtaggataat atcctacata tcaaggcatt 61 ccctctgatt ggagaaatac catgccttca cgaactcgtt catccaacag tagtcgcttt 121 aaagggacta ctgggcggtt cggatccgtg tcgggtggtg gtacgattct gagtagttcg 181 cacgcctgtg acgacatcgt cggctcaggc gataatgctc ccttctcagt tactcatatc 241 accttagatg gcggagtaat aaataagcct aatacaggct tctttagttc gtggttcaac 301 aattacgtcg ctgacgttct tgatgttccc gcgaatttcg gccatcttgg tataatcgat 361 gacatcagca acgtcgacgc agctactcaa gctgccgctc gaaccaatcc gtcgcgtcct 421 tatgtggaca cgataacgga agtgttgcaa ctccatgagc ttactgatct tttgcataga 481 aatggtagtt ctatcatttc tcgctatggt cagaagaatc tcggtcttca atttggcctt 541 ttgccaattg ttgaagatat agatggcata ttaaatttct cggaccaggt tcacaaccgg 601 gttcaagaaa ttaaccgcct caaggagaga ggtcttcgac ggacggtctc atgtggctcg 661 ttcggagcaa gttccaaaca gaacttgttc attcagactc aaaacacctt tattcgagat 721 gattttgatg tctcaacgac tttgaatgtg cgggctcact gtaggtggtt acctaccggt 781 gatccgagca ttcttagtag tccacgtgag gtgcgtgagt tagcaagacg ggcagtccag 841 ggtattacca tggatgcttc cactgcgtgg gagcttatgc cttggtcttg gttactcgac 901 tgggccggta acgttgggca gtattttgct gctcaccgta atatcgttcc agctgtgctt 961 agtgacgttt ccgtcatgag gcacacgcgg acgtcgtggt cttggaaagg gacgcatttt 1021 gatgacgtta ccgtaacgcc tatcaatgtt cgtcgtgaat ccaagactcg tgcgacgtct 1081 tttaccgctc caatcgccca tttcccgttc ctttcgggaa accaaatggg tatactagct 1141 tcgcttgcgg tggcgaggtt gtgatacctt tccaccaacg tgaaactagc caggagtaaa 1201 gtatgttcgc agatcctcaa acgctcaccg ttaatgcggt ggcgaaagcc gtcgttcgaa 1261 tcaatcagga tcagtactct agcgagtacc ttctgagaag ctctctcgac gaatttcgtt 1321 tgacgattcg gaacacctcg tatttggaca aaaagcgcaa tgtgatgatt gatcgtcaca 1381 acgtcgaatt tgtccatacg gtttttccgg tctcaccggc gaccctttct attgttagga 1441 aggtgtacac cgtcatcgag aatcagcagg gtgataccct tactgatcct acgtatgtcg 1501 cgtcggcttt gtttgcttgg ttgacagcgt cttccaatgc aaacatcacc aagttgatga 1561 acttcgagag ttaaggaact cgaaggtccg ttcacgatct gcggcttgga tgacctccta 1621 ataggagaaa atcatgaaaa gccaagaaag tgctctactc catgtcgtgc gaggcgtctg 1681 taaagacgtc ctagcagcgt accctgctat agagggtttg ggtcttgata ttgaaagact 1741 cgccctttat tgtcaaacac ggggtcttgc gttatttacg ctcgaccttc caaatttgga 1801 ttcactctta ttgagtggac tcgaatctgg ccgtcttcag ctctctggac cgctatcacg 1861 gcgggtttcc aagagagtca aggttccgag attattctcg ggactttggc tacgtgtgtt 1921 tgatagggaa gcatgcttac ggcaggatgc cgatgttact agcatattct ttttacggca 1981 attatgctgt atcgggaaga agctagaggt ggagtgcact ccggatcgta tcgctacgac 2041 tctggaggca taccatgaca tcgaagagtc cattagaaga cctacccttg ggtgggaatt 2101 cgatgaactg gatgatggtt gccaacttga ctctatacat cttgtacagg ctcttgatgg 2161 cactcccttt aacaatgagg accttccgct attttcgagt aaaatcgaga aaagcgaaaa 2221 ggaagtcaaa gcgaagagag aagaccgcat cctcctagta agagtacagc aagtcgctga 2281 tctcatactc ggtacttttg atttcttcga tcctattgag tattctgctc aactggaaag 2341 tgaagccaaa ggtatcggct ttaagcatgg acctggtgca gttgcagaaa aacgtaaaaa 2401 ttgggagaaa tccacatttt tacattggcc tgctaagctt gagcgcctct ttccgtttaa 2461 actctgcggt acaactgcag ggtttgaggg agaggttcct ctcaatcatg aggggtcaag 2521 tgttctatat tgtgtgccaa agaccgcaaa aggtcctcgg ctcatcgctg cagaaccggc 2581 atcacatatg tggtgccaga aatgcatcga gtcttttctg aggtatcaat ttaagaaaca 2641 ctttggtgaa tcttttattg atctcaatga tcagaccaag tcaggagcac tagtgctaca 2701 agcttctcga gaccgattac tcgcaaccgt cgatttgtcg gatgctagtg atcgactttc 2761 gtgttggacc gtggagcgta tatttaggaa acatagttcc ctattatacc atctgcacgc 2821 cgcacgaacg aggctcctta gagataacat ctcgaaggat aaggactcct tcataaaact 2881 gaagaagttt gccacgcaag gaactgcttg cacgtttcct gttcaatccc ttgtgttctt 2941 gtgtattgct ctcgcatctt caattgaggg caatattact tggcacaaga tcaggggact 3001 acgcacccag gtacgtgtgt atggtgatga tattattatt ccatcacacg ggtacgcgcg 3061 attaaaccgc attatggtcg cccttggttt gaaagttaat atagcaaaga gctatgttaa 3121 cggacacttc agggagtcct gcggggtcga agggtacaga ggttacgatg taactcctgt 3181 taagcctaag accttaatcg ccgacagccc ggcttcgtgt caggctgttg tagacacatc 3241 caacaatctc tttaataaag gattatggta tgcatcagac agccttagag cctttcttcc 3301 tgcacgtcta cgacgtggaa tcaggattgt gggcatcaac gacgctgggt tcgccggtct 3361 cacctcatat tctggaagcg atgaatctca tcttgctaaa agatggaatt ctcgcctaca 3421 taggtacgag gtcagagttt ggacattact tgtccgaact caagaacgag acaggcaagg 3481 actaccggca ttgctggact tctttgccag caagcacaat catgagcatg ctcggattgt 3541 gtctgaatac cgggatgttc ggaaaaccag agatggtttt ctatgggagc cccttaacac 3601 tggcgctcgc ttacgtgata cttaataagg acattggaat tgaggatcat attgatcatc 3661 agttacaaaa ccgtggattc tttaccctcg aagtaaggga taaggaagcc atgggtgtcg 3721 cttatggtag tatcatttca gctaatgagt accaggaagc tcttagctac cttcatgagg 3781 attctttcct cgaaggtggg caagtgaaga attcgaaaga gttctacgct cgttgagctt 3841 cgccgtaagg ctgattaagg gtgtataggg atttaaaaga catccacatt tgtggctctg 3901 ccttcttccc ttgggaagtg c //