LOCUS BK013829 3964 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.2_29 genomic sequence. ACCESSION BK013829 VERSION BK013829.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.2_29 ORGANISM ssRNA phage Gerhypos.2_29 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus solihabitans. REFERENCE 1 (bases 1 to 3964) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3964) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN035393 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3964 /organism="ssRNA phage Gerhypos.2_29" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786262" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus Gerhypos.2_29" gene <1..1466 /gene="Gerhypos.2_29_1" CDS <1..1466 /gene="Gerhypos.2_29_1" /codon_start=3 /product="maturation protein" /protein_id="DAD51474.1" /translation="RKGPQNAGTSCVSPCLQCILGRSLCVSFKRFTEPYGFPAAKEVK DNTLVHRERHLPLDGVSGVGIIERSIKDRVTDNVHQDKFVSDSTAFLDAHLGGYQMVD TESHPLWLRRKRGEFHGDLGGPFYTLKWWSEVEKPKVTIRSSRSSDPTDAWPAGRIQT DTVYRGPLLPADPGSLQYHLPFPVSSSKDDLDVWGTKAIAMCSPSNPTVDLTTALGEL IHDGVPAAIGSTLRLWRNLSPKERRKAIGHEYLNIEFGWKPLISDLQDLCKAILKSDE ILRQHEKDSGKMVRRKADFPEESSQSVEVAFSGESPWLAPSTTDLYLPGFSDWGKVYV SQKLSVRRWFSGAFTHFVPEADSSRNAIARHAIQARKLLGISLTPDAVWNLMPWSWAV DWFVDVGDILTNWTNWAIDGQVLLYGYIMEHKLHEKTYTYVGKTGFPGNVQPSGVKMV VETKIRRQATPYGFGLNWSGFSARQIAILTALGLSRS" gene 1536..1898 /gene="Gerhypos.2_29_2" CDS 1536..1898 /gene="Gerhypos.2_29_2" /codon_start=1 /product="coat protein" /protein_id="DAD51475.1" /translation="MSFADPLSITIGGVTSSLPRISVGDDTSEYQSGDGLVKLSASHT YGKRTRRLLRVDTSKMTADPFRPAENVQVSMSNYLVFDLPKAGFTPAEANAVWQGFKT LIITSSDLMIVKLLGGES" gene 1947..2129 /gene="Gerhypos.2_29_3" CDS 1947..2129 /gene="Gerhypos.2_29_3" /codon_start=1 /product="hypothetical protein" /protein_id="DAD51476.1" /translation="MGLHSYELASPCQRIVLAMEDLPSQIGTSYRIQVVLQEDLVLMK DIALIVIRVIPSLENI" gene 2399..>3964 /gene="Gerhypos.2_29_4" CDS 2399..>3964 /gene="Gerhypos.2_29_4" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51477.1" /translation="MATRCCTSATLDIRTVERRVEHEGLSFLAITLADYGKAVQKWLD HGLVVPSDQTAFKASGPIGFPAFLQGFLGRVFDPSSGVLLENPDIEAIYAIRQLTLMF SKISPPGLTRNGGTTRVVTRERERLAMSEFLQCEKEVRESDLILDPVYKDRFGRMSDL LFGEMFGKLEEILAFHHLVPKHGPGAVADRLSSNAKYDSRTWTTRLQSVFRAEDYLVA NPNVSSDLCRNAFSVSATMYCYQSSATKFHLLEPDAEMPVRVITVPKTLKSPRIIAIE PTCMQYMQQALFGIIRDGIERFYPLSSMIGIEDQEPNRNLAREGSLSGDLATLDLSEA SDRVSNQHVLALFARHPLLLEAVQATRSRKADVPGHGVIRLAKFASMGSALCFPVEAM VFLTLIFLGIDEELSTPLCDERDINSFVDRVRVFGDDLIVPRDYVLSVVDTLSTFGYK VNVSKSFWTGRFRESCGREYYDGQDVSIVKVRAVLPTQRQDATGVLSAVSLRNQLYWA GQWKAAAWLDDYLG" ORIGIN 1 cccgaaaggg gccccagaac gctggcacat catgtgtctc tccctgtctg cagtgcattc 61 tagggaggtc tttgtgcgtc tctttcaaga gattcacaga accgtatggc tttccggccg 121 ctaaggaggt gaaggataac acgcttgttc accgcgagag gcatttgccc cttgacggtg 181 tcagtggtgt aggtatcatc gagcgatcta tcaaagatcg cgtcacggat aatgtccatc 241 aggacaagtt cgtgagtgat agtaccgcat tccttgacgc tcatcttggc gggtatcaga 301 tggttgatac tgaaagtcat cctttgtggc tccgccgcaa acgcggcgag ttccacggag 361 atttgggagg acccttctac acactgaaat ggtggtctga ggttgagaaa ccaaaggtta 421 ccatcaggag tagtcggtcg tcggatccaa ccgacgcctg gccggctggc aggattcaaa 481 cggacaccgt ttatcggggt ccgcttctgc ctgctgatcc aggatcattg caataccatc 541 tcccatttcc ggtttcgtct tcaaaagacg atctggatgt atgggggact aaggcaattg 601 caatgtgttc cccctcgaat cccaccgtcg atctaactac tgctcttgga gagttgatcc 661 atgacggcgt tcctgccgct attggatcta cgctacgttt gtggcgtaat ctcagtccca 721 aagaacgccg aaaggcgatt gggcatgagt atctcaacat tgagtttggt tggaaaccac 781 ttatctctga cttgcaagat ctttgcaagg ctatccttaa gtctgacgaa attcttcgtc 841 agcacgaaaa ggattcaggt aagatggttc gacggaaggc tgacttcccg gaggaaagtt 901 cccagtctgt agaggttgcc ttttcaggcg agtcgccttg gcttgcgccg agtacgacag 961 atctctacct accgggcttt tccgattggg gtaaggtgta cgtgagtcag aaactctctg 1021 tacgtcggtg gtttagtggc gcgttcacgc attttgttcc agaagctgat agctcgagga 1081 acgctattgc gaggcacgcc atccaggcaa gaaaattgct tggaatatca ctgaccccag 1141 acgctgtctg gaaccttatg ccatggagct gggccgtcga ctggttcgtt gacgttggtg 1201 atattcttac caactggacg aattgggcaa tcgacggaca ggtgttgctg tatggttaca 1261 tcatggagca taagcttcac gagaagacct atacatacgt tggaaagacc ggttttcccg 1321 gtaatgtcca acctagtggt gtcaaaatgg tcgttgagac caagattcga cgccaagcaa 1381 cgccttacgg ttttggcttg aactggagcg ggttctccgc tcggcagata gccatcctta 1441 ctgcgctcgg ccttagccgt tcgtagtatg ggactcatgc tagcgtatta atatcgccaa 1501 cagggagtct aaccgggctc ctaggagtga tgctcatgtc gtttgccgac ccactatcaa 1561 tcaccatcgg cggtgtcaca tcgtcgctcc cgcgcattag cgtaggagac gatacgagtg 1621 agtaccaaag tggtgacgga ctcgtcaagt tgtctgcctc ccacacttac gggaagcgaa 1681 ctcggcgact tctgcgggtc gatacctcga agatgacagc tgaccctttc aggccggctg 1741 agaacgtcca ggtgtccatg tcgaactacc tggtgttcga tttgcccaag gctggcttta 1801 cgccggccga ggcaaatgcg gtgtggcagg gcttcaaaac cctgatcatc acctcttcgg 1861 acttgatgat tgtcaagctt ctggggggcg agtcctaaaa ggcctttgct atcttaccga 1921 ttaatttcgg gagtagcgag gtcccaatgg gcttgcattc ctatgagctg gcatcaccat 1981 gtcagcggat agtcctggca atggaggatc taccgagtca aatcgggaca tcctaccgga 2041 tccaggtggt ccttcaggag gatttggtcc tcatgaagga tatcgctctg atcgtaatcc 2101 gggtcatccc gtcactagaa aatatatagt gacggctgtc gcggtgatca atgcgatcta 2161 tctgctaggt aatactttca tcagtaccac acagtgtggc cattgatgag agagcaaact 2221 ctacggtagc ggttcggcgt caacgggggt acaaggtatc gtactttgtg ctcccctatt 2281 ggccttactt cgtttccgtc tgagtcttgt cgtcatgggc tagggatgga tcaccttcca 2341 acgaaaggag gggaccctga aaagcctgac gtcactctgg tcctgtgtcg cacatgaaat 2401 ggcgacacga tgctgcacca gcgccactct cgacataaga actgtcgaga gacgggtaga 2461 acacgagggg ttgtcgtttc tagcgattac cctggcggac tatggaaaag ctgtccaaaa 2521 atggcttgac catggtctcg tcgtcccttc agaccagacg gcttttaaag cgtctggccc 2581 tattggtttc cctgcattcc tgcaaggttt ccttggacgt gtgttcgacc ctagtagtgg 2641 cgtgctgttg gagaatccgg atatcgaagc aatctatgct attcgccagc taacgctgat 2701 gtttagcaag attagtcctc ccggtctcac cagaaatggt gggactaccc gtgtagttac 2761 gcgggagagg gagaggctag cgatgtccga gttccttcaa tgtgagaagg aggtgaggga 2821 atcagacctt atcctggacc ccgtctataa agacaggttt gggcgtatgt ctgatttgct 2881 tttcggggag atgtttggga agctggaaga aatcctggct ttccatcacc tcgttccgaa 2941 gcatggtcca ggcgctgtcg cggatcgtct cagcagtaat gctaagtacg attcgcgaac 3001 ctggaccacc agacttcagt ccgtttttcg ggctgaagac taccttgtag ctaatccgaa 3061 cgtaagttcc gatttatgca gaaacgcttt ttcggtttct gcaacgatgt actgttatca 3121 gtcatcggct acaaagtttc acctcctcga acccgacgcg gagatgcccg tgagggtcat 3181 caccgtgcct aaaacgctca agtcacctcg gattattgcc attgaaccga cctgcatgca 3241 gtatatgcag caggcgctct ttggcatcat ccgcgatgga atcgagaggt tttaccccct 3301 ctcatccatg atcggaatcg aggaccagga acctaatcgg aacctggctc gtgaaggatc 3361 cctcagcggg gaccttgcta cgcttgatct aagcgaagct tccgatcgtg tctcgaatca 3421 gcatgtactt gccttgtttg ctagacatcc tcttttgctt gaggcggtcc aagctactcg 3481 gtcaaggaag gctgatgtac ctggccacgg agttatccgt ttggccaagt tcgcgtctat 3541 gggttcagct ctttgctttc cggtggaagc aatggtcttt ttgaccttga tcttcctagg 3601 aattgacgaa gagctcagca ctccgctttg cgacgaaagg gatattaatt ctttcgtcga 3661 cagggtgcgt gtctttgggg acgacttaat tgtcccccga gactatgtgc tgtccgttgt 3721 tgacacactg agtacttttg ggtacaaagt gaatgtcagc aagtctttct ggaccggaag 3781 gttcagggag tcttgcggac gggagtacta tgacggccaa gacgttagta tagtcaaggt 3841 tcgtgctgta cttccgacac aacggcagga tgcgacgggt gtactttcgg cagtatctct 3901 cagaaatcag ctctattggg ctggtcaatg gaaggctgct gcttggttgg atgactatct 3961 cggg //