LOCUS BK013507 4079 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.2_30 genomic sequence. ACCESSION BK013507 VERSION BK013507.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.2_30 ORGANISM ssRNA phage Gerhypos.2_30 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus solivicinum. REFERENCE 1 (bases 1 to 4079) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4079) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-4079 MN034165.1 1-4079 FEATURES Location/Qualifiers source 1..4079 /organism="ssRNA phage Gerhypos.2_30" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786264" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus Gerhypos.2_30" gene <1..1444 /gene="Gerhypos.2_30_1" CDS <1..1444 /gene="Gerhypos.2_30_1" /codon_start=2 /product="maturation protein" /protein_id="DAD50371.1" /translation="PLGGLPGASASTLPINRKRDPCRNGYDMPKSREELQVPIVTQTR KMRSKKTAWYRVGSGPVILLDPVDYYPSPILASETTTGFRSGREYDDLSVDKDFGSNQ RDFVKTLKEDYRVGPQSTYDNGHEFDTVKRWVEGDFITLKTSPTFNSVYEGPIFSDAS YHQRSTYPGTPALNSLGYYGPLAIKRTAPTSPHVSLAQGLTELKREGIPALPGVHLLK DRVAHFRELGGEYLSLEFGWKPILSDIQSTYSAVRKASAILRQYQRDSGKIVRRQTSF APIYTSWARTDNPIGRLLKPPGWSSAAWTSMWKSGNTQGSLLETETSETRTWFKGAYT YYLQDDNKVLNRLFEYEQKANLLFGTRITPDVVWNLAPWSWLSDWFVNVGDNISNATS LSSDGLVMKYGYLMQETVSKHTCTIVGPQLLTGGSNVWTTTFYTSRKHRMKATPYGFG SNPASFTGRQWAILSALGFARGTGQLSAGE" gene 1520..1882 /gene="Gerhypos.2_30_2" CDS 1520..1882 /gene="Gerhypos.2_30_2" /codon_start=1 /product="coat protein" /protein_id="DAD50372.1" /translation="MTFADPQSVTISGTAHSLPRVAVDGSGSSYSKDDGTVQYIVVQA YGKRNRRTVKIVHSKNAPDPLFPTQNTPYSMTAYVSVDVPKVGYTIAEQKAVVDGFIA NLNATSGANLTKLLGGEN" gene 2007..3887 /gene="Gerhypos.2_30_3" CDS 2007..3887 /gene="Gerhypos.2_30_3" /codon_start=1 /transl_except=(pos:2007..2009,aa:Met) /product="RNA-directed RNA polymerase" /protein_id="DAD50373.1" /translation="MKSPNDILQYILEDLGMWCRTSTSHDLKTIMARVEHEGWSFLTI TLPAFGKDFERSLDQGFVGPTQFYGFRRSGGLPLFLGGFLDCVFDRRSGELLSVPSIA CIQAIRQLTLMFAKISLECSPAREKAAMRRYVECEQEVAESSDNLPPEMVDRYCRVGT LLWGDVLSGVDSDVYNGNIVARHGPGATADKLRGNAKWSQSEWTWRLEQVFPHGEHLA SSWRYFQDLQHVRFLEPGTERPTRVVPVPKTLKTPRIIAIEPTCMQFMQQGLLASLQR WIGTDNSALQLVGWTSQVPNQHLACQGSSNGTLASLDLKEASDRVSNQHVRLLLRNHS SLAGAVDSTRSRKADVPGHGVISLAKFASMGSALCFPFEAMVFATIIFSAIEEDLARP ITRKDIKSYLGKVRVYGDDIIVPVEHVHSVIRYLEGFGLLVNRDKSFWTGKFRESCGG DFYDGHDVTIVRMRSVLPDHRQQTREDYAGSVVSTVSFRNQLYKAGLWKTVEYLDSYL EGLIPFPYVSEISPVLGRYSFLGIEPGGRVCPDLQIPLVKGMRVKATIPRSRLEGYAA LNKCLTTMFHREGAPLEEVLFRDACLGDYTDYVPTSRGSEHLEYAGRPVAVDIKHRWG PA" ORIGIN 1 ccccctaggg ggcctccctg gcgctagcgc gtccacgctt ccaattaacc ggaagcgtga 61 cccatgtcgt aatggttacg acatgcccaa atcccgtgag gaactccaag tgccaattgt 121 gactcagaca cgaaagatgc ggtcgaagaa gaccgcatgg tatcgcgtcg gtagcggccc 181 agtgatcctt ctggatcctg tggactacta cccgagtccc atattggcaa gtgagacgac 241 taccggattt cggtccggtc gtgagtatga tgacttgtca gtcgacaagg acttcgggtc 301 caaccagaga gactttgtta agactctcaa ggaggattac cgagttggtc cacagtcgac 361 gtatgacaat ggacacgagt ttgacactgt caaaagatgg gttgaaggtg attttatcac 421 cctcaagacg tctccgacat tcaactcggt ctatgaaggt ccgattttct cggatgcttc 481 ataccatcag cgaagtacat atccgggtac cccagctttg aacagtctgg gatactacgg 541 gccgctcgct atcaagcgga cggcgcctac ttcgcctcac gtgtcactcg cgcagggttt 601 gactgagttg aagagggagg gcattccagc cctaccaggc gttcatcttc tcaaggatcg 661 agttgcccac ttccgtgaac tcggaggtga gtacttgagt cttgagtttg gatggaagcc 721 gattctctcg gatatccagt caacctatag tgctgtcagg aaggcatcag ccatcctaag 781 acagtaccaa cgcgactccg gcaagattgt ccggagacag acaagtttcg ctcccatcta 841 cacctcttgg gcccgcacag acaacccaat cggacgactg ctaaagccgc ccggttggag 901 ttctgctgcg tggacttcaa tgtggaagag tgggaacact caaggttcac tccttgaaac 961 tgagacctcg gaaacgagga cttggttcaa gggggcatac acgtactacc ttcaggacga 1021 taacaaagtc ctgaataggt tgttcgagta tgaacagaag gcgaaccttc tgttcggcac 1081 caggattact cctgatgtcg tctggaacct agcaccctgg agttggctgt cagattggtt 1141 tgtcaacgtt ggagataata tctccaacgc gacaagccta agctctgacg gtctggtcat 1201 gaagtacggg tatctgatgc aggaaactgt atcgaagcac acctgtacca tcgttggacc 1261 ccagttacta actggtggtt ccaatgtctg gactacgact ttctacacaa gtagaaagca 1321 tcgtatgaag gcgacccctt acggtttcgg ctcaaacccg gccagtttta ctggtcggca 1381 atgggccatc ctgtcagccc tgggtttcgc ccggggaaca ggtcagctgt ctgctgggga 1441 gtaaccaact ctcacgcgca gctggaacct acatcaacta tccggttggt gtagaacacc 1501 aagtcaggat atctcgctca tgacctttgc agatccgcag tcagttacga tctctggcac 1561 agcacactcg cttccgcggg ttgctgtgga cggttccggc tcatcctatt ccaaggatga 1621 cgggactgtc cagtacatcg ttgtgcaggc ctatggcaag cgcaatcgac gcactgtcaa 1681 gatcgtgcac tcgaagaacg ctcccgatcc gctgtttccg acccagaaca ctccctactc 1741 gatgacagct tatgtctcgg tagatgtgcc caaggtcggt tacacgatcg cagagcagaa 1801 ggctgttgtg gatggcttta tcgccaacct caacgccact tcgggtgcca acctcaccaa 1861 gcttcttggt ggggagaact gacccaggtt ggaacctggt tggcgggggg ccgttgaaat 1921 acggcccccc gtcctaatct gcagcgcaga aatgcgtctg gttgtgggct agggatcttg 1981 ccaactctcc taagagggag cgacaagtga aaagcccgaa cgacatcctg caatacatcc 2041 tcgaagattt ggggatgtgg tgtcgcacta gcaccagcca tgatcttaaa acgatcatgg 2101 cacgagtcga acacgaaggg tggtcgtttc taacgatcac cctcccggcc tttggtaaag 2161 acttcgagag aagtcttgac caagggttcg tgggtcctac gcagttctac ggtttccgta 2221 gatccggtgg tctcccccta tttctaggag gtttcctcga ctgtgtgttc gatcgtcgat 2281 ctggtgagct actcagcgtt cccagcatag cgtgtatcca agcgatacgt cagctaacgc 2341 tgatgttcgc gaagatatcc ctcgagtgca gtcctgcacg cgagaaagcc gctatgagga 2401 gatacgttga gtgtgagcag gaagttgccg agtcttccga taacctaccg ccagaaatgg 2461 ttgataggta ttgtcgggtt gggactctgc tctggggcga tgttttatcc ggtgtggaca 2521 gcgatgtcta caacggtaac atcgtcgcga gacatggtcc aggcgcaacg gccgacaagc 2581 tccgcggaaa cgcgaagtgg agtcagtccg agtggacctg gagactggaa caagtgttcc 2641 ctcatgggga gcatcttgct tccagctgga ggtatttcca agacctccag catgtgcgct 2701 tcctcgaacc tggcactgaa agacccacca gggtcgttcc agtgcctaag acactcaaga 2761 ctccacggat cattgccatt gagccaacgt gcatgcaatt catgcaacaa ggcctattgg 2821 catctctcca gcgttggatc ggaacagaca actccgctct ccaacttgtc ggatggacaa 2881 gccaggtgcc taatcagcac cttgcttgtc agggctctag caatggaacc ctcgcctccc 2941 ttgatctcaa ggaagcctct gacagagtct cgaatcagca tgtacgactc ctgttacgaa 3001 atcacagctc cctcgcggga gcagtggatt caaccagaag tcggaaggct gatgtgcctg 3061 gccatggtgt gatttccttg gccaagttcg cgtctatggg ttcggccctc tgctttccgt 3121 ttgaagcgat ggtcttcgcg accatcatct tcagcgcgat tgaagaggac ctagctcgtc 3181 cgatcactag gaaggatatc aaatcctacc taggaaaggt gcgcgtctac ggagacgata 3241 tcatcgtccc tgtagaacat gtgcattctg tgattcgtta tctcgaggga tttggactcc 3301 tcgtgaatcg cgacaagtct ttctggactg gaaagttcag agagtcttgc ggaggggact 3361 tctacgacgg gcacgatgtt accatcgtgc gcatgcgtag tgtccttccc gatcacagac 3421 agcaaactcg agaggactac gctggtagcg tagtctccac agtctctttc aggaaccagc 3481 tttacaaggc tggtctctgg aaaactgtgg aatatcttga ctcgtacttg gaaggtttga 3541 ttcccttccc gtacgtctcc gagatatctc ccgttcttgg caggtactcg ttcctcggta 3601 tcgaacccgg gggtcgagta tgtcctgacc ttcagatccc tcttgtcaag ggaatgaggg 3661 tgaaggctac cattcctcgc tcacgcttgg aagggtatgc tgccttgaac aagtgtctca 3721 ctaccatgtt tcaccgagaa ggtgcacctc tggaggaagt tctcttcaga gatgcatgtc 3781 tcggcgatta caccgactac gtgccaacga gtcggggtag cgagcacctt gagtatgctg 3841 gacgtcctgt tgccgtcgac atcaagcaca ggtggggacc cgcctaacca ggcgggttcg 3901 tggttgccat agtaggcgcc acgctgggag tcttgtgcag actcctctcg gagtccgaac 3961 tcaattcgct tgaagctctt ctgacgaaag tcaagaagtc ttcgtaggca ctcgacaatg 4021 tcgagagccg cgcgaaaaga gggcgggggt aaccccccgc acaaggctct gggagatgc //