LOCUS BK013422 4463 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.2_36 genomic sequence. ACCESSION BK013422 VERSION BK013422.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.2_36 ORGANISM ssRNA phage Gerhypos.2_36 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Blumeviridae; Cehntrovirus; Cehntrovirus agrihabitans. REFERENCE 1 (bases 1 to 4463) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4463) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-4463 MN034386.1 1-4463 FEATURES Location/Qualifiers source 1..4463 /organism="ssRNA phage Gerhypos.2_36" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786270" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Blumeviridae; Cehntrovirus; Cehntrovirus Gerhypos.2_36" gene 39..1946 /gene="Gerhypos.2_36_1" CDS 39..1946 /gene="Gerhypos.2_36_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50069.1" /translation="MKLQKHPGSNQILIGAVVHSMSLWRPYWFGNVDPVCGALDGTIC DVGYYDLETIYDAVPHHDNSPSVIDVDYHRPNTIRVKDAGPDESRYGNFFGSFRRFTD VLGITRPISRFAKNENFVYHPSSHGTFRAVRSGDRAFNSPPFDDIWFQEQYSSGSMLK QCTVRSGDENFASVQCIDFNQYVIVPGFDGRPSYSVSRRLADINNGGFNQVIIGPDGW YSRFNFTSFSFSFGEGGFDLHFTADWRWDPILTTLLVSPLYGFSYESRFHFTTHLSPS LTPSDFNIGEVRSRRSDLVSSTLMLTYKVLAHFGTASSHGGPDIGVENTLSVDSNHWQ PLSPIRGNDIAVFELSKNRIDAYPPSLAFRRRIDSRMRDIRPSSYISTSNAADKIIES INTNLIESVSDLRDLSGLVPEVKKFANLPISVGGFEELMKAGGSEYLRAIYGIRPTLT LLAELPRIKAVLSRLSNLSHEGLNLYGDFSYTFEGEFGRKITKMTTRSKVVLSKHPGP DVSVLLGLNSINALPTASNLWDLIPLSFVIDWFVNSSGNIETLENLMILEFVELSHFV HSYSFKSPFEDEDYDFYRIEPTGSEASLKYYAREISHILPGPVSFGYPFLLPSKPPPW LASFSLLLTRS" gene 1989..2456 /gene="Gerhypos.2_36_2" CDS 1989..2456 /gene="Gerhypos.2_36_2" /codon_start=1 /product="coat protein" /protein_id="DAD50070.1" /translation="MTTTNSIDRVGGTATDISVKKMAEADLKQVRTEALSPSGARTTY TMATGDDRYPTTVVVQAKPDYNGNKGKGVRSCLMAINTFARTETDGVIDMIEPLSAVL SFSIPMNVAIDVADLHDLLENLFSLGYETVTTKEGDDIRLAALLQFGITEVFD" gene 2456..4447 /gene="Gerhypos.2_36_3" CDS 2456..4447 /gene="Gerhypos.2_36_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50071.1" /translation="MSYSSTFLIRTSRGDRHYQISVTDLLLGDAKNQRNIELCSMFLD NWFTMLDDSPIRKLKGRITPRVSNAFVASINSRPLMQSLKFLSSLSDRILDSSDRWSL IEIIPDMKRTPLIREFLHFLDTGDPSYLEFILSFLIFGKKLRVEDSSFYDTAFREWLG VEERIGCMKFSPNDSNVILLRWIIGDLLSGFTLSPLVPKFGPGKVSESYVKNVDDKFD RLIFHKNFLRLLQLSGLDNQECLKYLKFICLDKLGDEREPPAIDVNGFISRLKFVPKD ISKSRSICMEPNVLMYVQQSILHDFVICFRGGLMRRFVDLNDQVPNQRAAEYGSLTGL VDTIDLSSASDSVNWDLVRLIFPDEIVEILGLTRSYATKIPDGTTYPMKKFAPMGSAL CFPIQCIIFTGLCILSGIRVMSDRLSIHSEDLYLNLRRDSYHGLFHDDYFYDYYRGRF EPPRVFGDDICIDTHLTDTLITFLGQFGFIVNKSKSFIGGNPNRESCGKYYHKGHDIT PVRFLLGFRSSLHDAKAMSSQIAYTNNCFDKGYLALRRLNIKQLHKWNRKISFIGDDS NVFGIKSEKPLNRHLKLVGRHDRQPKGCHAYDYQRTEMHCVNDIKKGRILLCTQYSDP YLYMRWWAERSDDSIKDPYGSSHQTIAPGSRVKLGWTPA" ORIGIN 1 cccaatgcct ctatcatctt actaaactag gaggtcccat gaaacttcaa aagcatcccg 61 gttctaatca gattttgatt ggagccgttg tgcattcgat gtctttatgg cgcccttact 121 ggtttggtaa tgttgatccc gtttgcgggg ctcttgatgg tacgatttgt gatgtcggct 181 actatgatct ggaaactatc tatgatgctg ttccgcatca tgataattct cctagtgtca 241 ttgatgtcga ttatcacagg cctaatacca ttagagtgaa ggatgcaggc cctgatgagt 301 ccagatatgg taatttcttc ggttcattcc gtcgatttac cgatgtcttg ggcatcacca 361 gaccgatttc tcgttttgct aagaacgaga atttcgttta tcacccctct tctcatggca 421 cttttcgtgc tgttagaagt ggtgatagag ccttcaattc ccctcccttt gatgatatct 481 ggtttcaaga gcaatactcc tctgggagta tgcttaaaca atgtactgtt cgaagcggag 541 atgaaaactt cgcctctgtt cagtgtattg actttaacca gtatgtcatc gtgcccggct 601 ttgatggaag gccgagctat tcagttagca ggcgtcttgc cgacattaac aatggtggct 661 ttaatcaagt catcattggt cctgacggct ggtactcccg ctttaacttc accagtttct 721 ccttttcttt tggagaaggt ggttttgatc ttcatttcac cgccgattgg cgatgggatc 781 cgatcttaac cacgttactg gtaagtccgt tgtatggttt ctcctacgaa agtaggtttc 841 actttacaac gcacttgtct ccttctctaa ccccttctga ttttaatatc ggagaggtta 901 gatcgagacg aagtgacctc gtgagctcta ccttaatgct aacatataaa gtgttagcac 961 attttggtac agcttcttca cacggtggtc ctgatattgg ggttgagaat actctcagtg 1021 tggactcaaa tcattggcaa cctctttctc ccattcgggg gaatgatatt gccgtatttg 1081 agctttctaa gaatcgaatc gatgcctatc cgccttcatt ggcgtttaga cgtcgaatcg 1141 attctcgaat gagagatatt cgtccttcat catacatctc cacttcgaac gcggctgata 1201 agattataga atctatcaat actaatttga tagagtctgt atctgatctt cgcgatctta 1261 gtggacttgt acctgaggtg aagaagttcg caaatcttcc gatttctgtc ggtggatttg 1321 aagagcttat gaaggcgggc ggatctgaat accttagagc aatctatggt ataagaccta 1381 ccctgacttt attagctgaa cttcctcgca tcaaagcagt gctcagtcgt cttagtaatc 1441 ttagccatga gggcttaaac ctttatggtg acttctccta tacttttgaa ggagagtttg 1501 ggaggaagat tactaaaatg actactcgtt ccaaggttgt tcttagcaaa caccctggtc 1561 ccgatgttag tgtgttactg ggtttaaact caattaacgc actaccaact gcttccaact 1621 tatgggattt aattcctcta tcttttgtta tcgactggtt tgtaaattcc agcggtaaca 1681 tagagactct tgagaatctt atgattcttg agttcgtgga attaagtcat tttgttcatt 1741 cctatagttt caagtctcca tttgaagatg aggactatga tttctatagg attgaaccaa 1801 ccgggtctga agctagccta aagtattatg cgagagaaat ctctcacatt ttacctgggc 1861 ctgtttcatt cggttaccca ttccttcttc cgtcgaagcc tcccccatgg ttggcttcgt 1921 tctcgttatt actaacgaga tcttagtcca cttccaataa ggaagttttc cagcgaaagg 1981 ttggagcaat gactacgacc aattcaattg atcgtgtcgg gggaaccgca acagacatct 2041 ctgtgaagaa aatggctgag gcggatctca aacaagttcg tactgaagcc ttgagtcctt 2101 cgggcgccag aaccacctat acgatggcta ctggcgacga tcgttaccct acgaccgttg 2161 ttgttcaggc taagcctgat tacaacggta ataaaggtaa aggagttcgc tcctgtctca 2221 tggcgatcaa tacgttcgcc cgcacggaga ctgacggtgt aatcgatatg atcgaaccgt 2281 taagcgccgt gctgtccttt tcgattccca tgaatgtggc aatcgatgtg gctgatcttc 2341 atgatcttct ggagaatctt ttctccttag gttatgaaac cgttaccaca aaggaaggcg 2401 atgacattcg tctcgccgca ctgctacagt ttgggatcac ggaagttttt gattaatgtc 2461 ctactcttct acttttctta taagaacaag taggggagat aggcactacc aaatctccgt 2521 gacggacctc ctgcttggtg atgccaagaa tcaaagaaac attgagcttt gctcaatgtt 2581 tctagacaac tggttcacca tgctcgatga tagtccaatt cgtaagctta aggggcgcat 2641 tacacctaga gttagtaatg cctttgtggc atctattaat tctaggcctc taatgcaatc 2701 ccttaagttt ctctccagtc tttctgatcg aatcttagat tcatcagatc gttggtctct 2761 tattgagatc attccagata tgaagaggac tcctttaatt agggagtttc ttcattttct 2821 ggatactggt gacccctcat atctggagtt tatcctcagt ttcttaatct tcggaaagaa 2881 gttaagagtt gaggattcct ccttttatga caccgcattt cgcgagtggt taggggtaga 2941 ggaacggatt ggttgtatga aattctcgcc taatgattcc aacgtgattt tattacgttg 3001 gatcattgga gatcttctct caggatttac tttatctccc ctggttccga aattcggtcc 3061 agggaaggtt agtgagtcct atgtgaagaa tgtggatgat aagtttgata ggcttatctt 3121 ccataagaat ttcctacgtt tacttcaact ttctggtttg gataaccaag aatgtttgaa 3181 gtatctcaag tttatctgtt tagataaact tggggacgag agggagcctc ctgcaatcga 3241 cgtgaatggt tttatctcta ggctcaaatt tgtgccaaaa gatatatcca aatcacgttc 3301 gatttgcatg gagcctaacg ttctcatgta tgtgcaacaa agcatattac atgatttcgt 3361 tatatgcttc cgtgggggtt tgatgcgacg atttgtcgat ctaaacgatc aagttcctaa 3421 tcaaagggct gctgaatacg gctctttgac tggtcttgtc gatacgatcg acttatcgag 3481 tgcgtctgat tctgtcaact gggatctcgt acgtcttatc tttccagatg agatagttga 3541 gatccttggt ttgactagat catacgctac taaaatacct gatggcacta catatccaat 3601 gaagaagttt gcgccaatgg ggtcagcttt atgcttcccc attcagtgca taatctttac 3661 tggtttatgt atcctatccg gtattcgcgt catgtccgat cgtctgagta tacactcaga 3721 ggacctctat cttaatctaa gaagggatag ttatcatggt ttattccatg atgactattt 3781 ctatgattat tatagagggc gattcgaacc acctcgtgtc tttggagatg atatctgtat 3841 agatactcat ctcacagaca cactcatcac ctttttgggc caatttggtt ttatcgtcaa 3901 taagtcaaaa agctttattg gcggtaatcc caaccgagag tcctgtggta aatactacca 3961 caaaggacat gacataactc cagttcgttt tttactgggg tttcgctctt cgcttcatga 4021 tgcgaaggct atgtcatccc aaatagctta cacaaataac tgttttgata agggttacct 4081 agctcttagg cgactcaata tcaaacagct ccataaatgg aatcgaaaga tctcatttat 4141 tggagacgat tcgaatgttt tcggaattaa atccgaaaaa cctttgaatc gtcatctcaa 4201 attagttggc cgtcatgaca ggcaacctaa aggttgccat gcttatgatt accagcgaac 4261 cgagatgcat tgtgtaaacg atataaagaa aggtaggata ttgctttgta cacaatattc 4321 cgatccttat ctttatatga ggtggtgggc tgaaaggtct gatgactcta tcaaagatcc 4381 ttatggatct agtcatcaga ccatcgcgcc tggttctcgc gttaagctgg gttggactcc 4441 agcttaatca caagtacaac gag //