LOCUS BK013415 3959 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.2_6 genomic sequence, sequence. ACCESSION BK013415 VERSION BK013415.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.2_6 ORGANISM ssRNA phage Gerhypos.2_6 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Rehudzovirus; Rehudzovirus terrihabitans. REFERENCE 1 (bases 1 to 3959) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3959) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN035680.1 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3959 /organism="ssRNA phage Gerhypos.2_6" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786278" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Rehudzovirus; Rehudzovirus Gerhypos.2_6" gene 80..310 /gene="Gerhypos.2_6_1" CDS 80..310 /gene="Gerhypos.2_6_1" /codon_start=1 /product="hypothetical protein" /protein_id="DAD50045.1" /translation="MTRSEMIFVSHLAKELAKYEAFGSVPTELNQKVTEFLKECGPSV WFTSAYDLWSSARIEYYLELAVRREQDGRILR" gene 436..1719 /gene="Gerhypos.2_6_2" CDS 436..1719 /gene="Gerhypos.2_6_2" /codon_start=1 /product="maturation protein" /protein_id="DAD50046.1" /translation="MGYKHFYTTYQRFEVGSYSGYMSPTFYDMFNASIIDDYELVGFK EHTSVGTPGFHSVKRRHLPINPYHSYSLSISCGSGELFSQDQFGYAQYYRLSGISIAQ FVMGSVLSATYLRGGWVDRLNDHSSEEKALAKLIERIQGEKVNLAQMYAERKQVVDMV HSTIDRLVTAFAAIKHGKPNLAFQALGMKTRPRKEVLASYHKARARDPLDAAGNLWLE LQYGWKPLLGDVYSAAELLASRVVDRQPVLKAKSSSEQKVQNLLQGSFFGMQTGLASV SAKYSTRYYVEYEIPSESALLAGKTGLTNPALLAWELLPYSFVVDWFLPIGPWLESFT AFDGLEFKRGYRQNLSELKCGVSGAREIKELSPYFEARVNFQTQMNEREYTRTVLYSF PTPSLPRVKNPFSFSHVNSAVALLQNTFRKSVSKK" gene 1760..2194 /gene="Gerhypos.2_6_3" CDS 1760..2194 /gene="Gerhypos.2_6_3" /codon_start=1 /product="coat protein" /protein_id="DAD50047.1" /translation="MQTNVAIGVGAVKQLTMQALGINGNLATWKDTAVNSGVPIGFPT LTISNRHPTAQIRSYKAQIKLAVPYLATLGTTDDGGYVADPKVSYVNLANVELVFSDK ATLANRQDMAKYLKDLFGDAGFLDGLIESMTLSFDATLEAHA" gene 2227..3903 /gene="Gerhypos.2_6_4" CDS 2227..3903 /gene="Gerhypos.2_6_4" /codon_start=1 /transl_except=(pos:2227..2229,aa:Met) /product="RNA-directed RNA polymerase" /protein_id="DAD50048.1" /translation="MRLSDLKSKVSSFHKDFTDPVRDPHETLLRLGENLPDHPACLKW YMLLKHKEYRQLLTWEVDPIHFNYAYDFQITYLCASLLSKYADVDIGIDKEAVGRAKW IESELSCQGTNEIFRLRAEGGFNFLPHVEKVLLLAQRKISNVLGPLDVPYALENSGFG PGSDLGTKGLTSPFHKMEDPGHVTANCLKLLAKQGVFSWPVFEMMKTTGPLPQLKVVR HNKLMFVPKNSKTLRPISSEPRWNIFFQKGLGQLIKRKLQYDGIDTSDQTRNQQLSRR LDLATIDLSSASDRISWWLVLDLLPFDWFDTLDALRSPFTKDGNNFIELEKFSSMGNG YTFELETLIFYGLSTAVCQYLNLPLGDVSVYGDDIIVPVEAYPLLVEVLSAVGFSINL KKSYASGLFRESCGFHWFNGVSVTPFYIKEAPNNAERIIRMANQVALYSCDRRNSDFR DKAWLGAHARLVRLVPKNLRFYGPITINSCIGSDLDEYCPPRHRFFDAWVVRCPVYRS IPIQASGLALLYEKLIQPSSVGNFVNVRGRGYWTIANILVHDHQDLGGWY" ORIGIN 1 ggttaaaccc tcttcttgag tgaccatagg tctctccacc ggttacccgg tatcccagtc 61 cacttcctaa ggaaatttaa tgacacgctc tgaaatgatt ttcgtaagtc accttgcaaa 121 agaactcgct aaatacgagg ccttcggctc ggtacctact gaactaaatc agaaggtcac 181 tgagtttttg aaggaatgcg gcccctccgt ttggttcact tctgcctatg atctctggtc 241 tagtgctcgt atagagtact acctggagct cgcagttcgt cgtgagcaag acggaaggat 301 tctccgctga actggttcat ttactagtct tagactagtg agtgatcggt ctactcccaa 361 tgaccgaggc ggtaaatctg ctattagtcc tattggccca accagtggcc ttacaaaggc 421 aacaggaaag gttatatggg ttacaagcat ttttacacga catatcagag attcgaagtc 481 ggttcttact ccggttatat gtcccccacc ttctacgata tgttcaatgc atcaattatt 541 gatgactacg aactcgtagg atttaaggag catacaagcg ttggaactcc cggctttcac 601 tctgtgaaga ggcgccacct cccgataaat ccgtaccact cttactctct gagtatcagt 661 tgcggttcag gagaactctt ctcgcaggac caattcggct acgctcagta ttaccgctta 721 agcggaatat cgattgcgca gttcgttatg ggaagcgttt tgtcggccac ctatctccgt 781 ggtggatggg ttgatcgttt aaacgaccac tcatccgagg agaaggcgtt agctaagctg 841 attgaacgta tacaaggcga aaaagtcaac cttgcccaaa tgtatgcaga gcgaaaacag 901 gtcgtcgata tggttcattc cactatcgat cgactcgtta cggcttttgc tgcaatcaag 961 catgggaaac cgaacctcgc tttccaggct ctggggatga aaacccgacc tagaaaagaa 1021 gttctcgcct cctatcataa ggcacgtgct cgcgatcctc tggatgcggc aggaaactta 1081 tggttggaac tccaatacgg ctggaagccg ctactcggag acgtttattc agcagctgag 1141 ctacttgcaa gccgtgtagt tgatcgacag ccagttttga aagccaagag ttcttcggaa 1201 caaaaggtcc aaaacttgct gcagggcagc ttcttcggta tgcaaaccgg cctcgcatct 1261 gtttctgcga agtactccac tcgatattac gtcgagtatg agatacctag cgaatcagct 1321 ctgctggctg ggaagacagg tctcacaaac cccgctcttc tagcatggga acttcttccg 1381 tacagcttcg ttgttgactg gttccttccg attggtcctt ggcttgaaag cttcacagct 1441 ttcgatggcc tcgaattcaa aagggggtac cggcaaaact tatctgaact gaagtgtggt 1501 gtttctggag ctcgagagat aaaagagctg agtccatatt tcgaagcaag agtaaatttt 1561 cagacacaga tgaatgagcg ggagtatacg agaactgttt tatacagttt tccaacccct 1621 tctcttcctc gagtgaagaa tcctttctct ttttctcatg tgaactcggc tgttgctctt 1681 ctccagaaca cattccgtaa gtctgtttct aagaaataga ctcccatccc ggctttaaaa 1741 gccacatgaa agtgatctca tgcagacaaa tgtcgcaatc ggcgtgggtg cagttaagca 1801 actgaccatg caagccctcg gtatcaacgg aaatctggcc acgtggaagg atactgccgt 1861 caacagtggg gtgcccattg ggttccctac gttgacgatc agtaaccgtc acccgacggc 1921 acagatccgt tcttacaagg cgcagatcaa actcgcagtg ccgtacttgg ctactctggg 1981 aaccaccgat gacggcggat acgtcgctga cccgaaggtc agctacgtga atctcgccaa 2041 cgtcgaactg gtcttcagtg acaaggctac tctcgcaaac cgccaggaca tggccaaata 2101 cctcaaagat ctctttgggg atgctggctt cctggacggt cttatcgaga gtatgaccct 2161 gagcttcgac gccactctcg aagcccacgc ctaacggctg gggcttcaac aatctaagga 2221 gaaaatgtga gactttctga tttgaaatcg aaagtatcgt ctttccataa ggatttcact 2281 gatcccgtga gggatcctca tgaaactctt ttaagattgg gcgagaatct tccggatcac 2341 cctgcctgtc tgaaatggta tatgctttta aagcataaag agtatcgaca gctactgacc 2401 tgggaggtgg acccgatcca tttcaactac gcttacgact tccagatcac ttacctctgc 2461 gccagcttac tgagtaagta tgctgatgta gatattggta ttgataaaga ggccgtaggc 2521 cgggcgaagt ggatcgaatc agagcttagt tgtcaaggta cgaatgagat ctttagactt 2581 agagctgagg gtggatttaa tttcctacct cacgttgaga aagttctttt acttgctcag 2641 cggaaaatct ctaatgtctt ggggcctctg gacgtaccct acgcacttga aaactctggt 2701 tttggtcccg gatctgacct gggcacaaag ggactgacat cccccttcca taaaatggag 2761 gatccaggtc atgtcaccgc taattgtctg aaactccttg ctaagcaagg cgtctttagc 2821 tggcccgtct tcgaaatgat gaagacgacc gggccgttac cacaacttaa ggttgtgcgg 2881 cacaataagc ttatgtttgt accaaaaaac tcaaaaacac ttcgaccaat tagctctgaa 2941 cctaggtgga atatcttttt ccagaaaggt ttaggccagc tgatcaagag aaaactgcag 3001 tatgacggaa ttgatactag tgatcaaacc cgaaatcagc agctttctcg tagattagac 3061 ttggcgacta ttgatcttag tagtgcatca gaccggattt cttggtggct cgtcttagac 3121 ttgctccctt ttgactggtt cgatactctc gacgccctgc gttcaccctt tactaaagac 3181 ggaaacaact ttattgaatt agagaagttc tcgtcaatgg gtaatggtta tacgtttgag 3241 cttgagacgc tgattttcta cggtctttcg actgcggtct gtcagtatct caatcttccc 3301 ctaggggatg tgtcggttta tggggacgat atcatcgtcc cggtggaggc ttatcctctt 3361 ctagttgaag ttctttctgc agttggcttc tctattaatt taaagaagtc ttatgcatca 3421 ggacttttcc gagaaagttg tggcttccac tggtttaatg gtgtctcagt aacgcctttc 3481 tatataaagg aggcaccgaa taatgctgaa agaattattc ggatggctaa ccaagttgct 3541 ttgtatagct gtgatcgccg taatagcgat ttccgcgata aagcttggct tggcgctcac 3601 gctcggttgg ttcgattggt tccaaaaaat cttagatttt acggtcccat cacaatcaac 3661 tcctgtatcg gatccgacct cgacgagtac tgtcctcctc ggcatcgttt tttcgatgct 3721 tgggtagtgc ggtgtcccgt ctatcgttcg atcccgatac aggcatctgg attagcgctt 3781 ctctacgaga agttaatcca gccttcaagt gttggcaatt ttgtcaacgt aagagggcgt 3841 ggttactgga cgatagcaaa cattctggtt catgatcatc aggacctggg gggttggtac 3901 taacttaggt taggcttcct ctctttctcg gcattgcctt ggagtgtgac ttttcacag //