LOCUS BK013442 4378 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.3_17 genomic sequence, sequence. ACCESSION BK013442 VERSION BK013442.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.3_17 ORGANISM ssRNA phage Gerhypos.3_17 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Chahsmivirus; Chahsmivirus agrivivens. REFERENCE 1 (bases 1 to 4378) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4378) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN035335.1 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4378 /organism="ssRNA phage Gerhypos.3_17" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786290" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Chahsmivirus; Chahsmivirus Gerhypos.3_17" gene 41..409 /gene="Gerhypos.3_17_1" CDS 41..409 /gene="Gerhypos.3_17_1" /codon_start=1 /product="hypothetical protein" /protein_id="DAD50138.1" /translation="MKQVSFSNFIAFGKRMSIDIRVISSFDVNGQAIGIPTQFTISDE IPNTGDSDGIHISFNEMAERLIHDLVLQLNSRGLTALGIELTKRFRNSVEFADGYLES FAGIIALIYELNNETFRVEE" gene 544..1869 /gene="Gerhypos.3_17_2" CDS 544..1869 /gene="Gerhypos.3_17_2" /codon_start=1 /product="maturation protein" /protein_id="DAD50139.1" /translation="MPTPDHDFGRVHRMTYFEKREDGFTSSGVLGNFEVFHDKETTVS QRTPNYKKLKRSLLPVNPYHHYKNKLFDPSSSFSASSQSVSGGLVSVWTYDMNAQAFG CRTAVNASEAADDPSQRAINKIMSQISLGKGNLAVTMAEMDKTAMHVAHTATRIFKAL TALKHARFGDFTKALGVTSTRTENRNFYRGFRKASSRDGVSRQSFAWDKKFKFKDTRN ESHVSDFLADTWLEYSYGWKPMLKDVYDNAEAVASLFVEHQNIVRTAKGRAQSEGKWE TETIPVNNHIVYNTRATDKIWVEIEVRYRIPVSQLNPIHAFGLTNPMEVAWELVPFSF VVDWFLPIGDAIRSLTAFDGLEYAGGYKSSKHERIFESSVKGIDKTYGGVRWFNHSGG GSLTRIEYDQIRTDLTGFPSYGWPRFKDPRSLAHGASAIALLQSLFLRK" gene 1928..2341 /gene="Gerhypos.3_17_3" CDS 1928..2341 /gene="Gerhypos.3_17_3" /codon_start=1 /product="coat protein" /protein_id="DAD50140.1" /translation="MAQRGNITLTDAATTPVNRVYYPVKSAGDILGWQDRTQSVYAGQ NRLTVSQRVATKSTKAHKISWKLETPILEQTSPSTSTGIQPAPTVAYTPVGTIELVLP DRMSLQERKDLLAQMRDLIAEAIVTAQVQDLDFIY" gene 2495..4306 /gene="Gerhypos.3_17_4" CDS 2495..4306 /gene="Gerhypos.3_17_4" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50141.1" /translation="MSVSSHLFEAIDTPRSLAAHILMKYGEYAQLVSMEIDPSSYISI EKFRYDYLATKFLSKFPDFSHEKLDPKGEALVAFLKYEDACKATNRKILELREDPSKR DPLMWGVLTLAKRKIARVLGRVDLDAIAEHFGWGPGATTSASGSHTSAYIKFAKRLDV TSNALMMGLCCVNSTPSWVNCQLQTDEYPSVSAHVLPSAFNIVRGNEIVFVPKNAKTH RIIAKEPHVNSYLQKGFGHYIRERLRTVARIDLKDQTRNQRLAKEGSLTGLLATIDLS GASDTISHELVRLLLPDEWFSLLDQIRSKQGFLREQGTWVYYHKFSSMGNACTFELES LIFWALCSAVLEINGGEQTLNVYGDDIIVPVEHYESVANVISYVGFSVNKTKSFASGP FRESCGKDYFLGTDVRPIFLKESISNAEQLLKLANSVRRYSYRSLNGYGCDARFHTVW LHVISKLPKAIRELRIPEGFGDIGLVSNFDESTPSLVRPKRDEAGWQGFIFRGIVRHP VKREMRDRHAGYTATLFGQGSAQHQRNLDLGLGDEYARRPARHLASSDTLSRVNQLVV GRERLPLLGSHDLRKRTYPTVSRIHTLRWCDLGPWLY" ORIGIN 1 cctccattcc ggagtccctc cttcaaccac acgaggttat atgaaacaag tatctttcag 61 caatttcatt gcttttggta aacggatgag tatcgatatc cgagtcattt cgtcttttga 121 cgtaaatggc caagctatcg gtatacccac ccagtttacc atttctgacg aaatcccaaa 181 cactggtgac agtgatggga ttcacatcag tttcaatgaa atggctgaaa ggctgattca 241 tgacctggtg ttgcaattaa attccagggg ccttacagcc ctcgggattg aattgacgaa 301 gcgttttcgt aactcagttg aattcgcaga tgggtacctt gaatccttcg caggaatcat 361 tgcacttatc tacgaactga ataacgaaac ctttcgcgtt gaggagtgac ccagaaatgg 421 ggatcctctt ggcctttagg ccccagctaa gctggccccg gtgtaacccg gagggtgcgt 481 cgtcacccgg tctatcgtaa gatagccgaa taacggcacc gtactttatc aggaggacca 541 agaatgccaa ccccagatca cgacttcggt cgtgtccatc gaatgactta tttcgagaaa 601 cgcgaggacg gttttaccag ttctggcgtt ctggggaatt tcgaggtctt tcacgataaa 661 gagactacgg tctcacagcg gactcccaac tacaagaagc taaaacgttc attacttccg 721 gtcaatccgt atcaccacta caagaataaa ctgtttgatc ctagcagttc tttttctgct 781 agtagccaat cagtctctgg tggtttggtg tcggtttgga cgtacgatat gaatgctcag 841 gcctttggtt gtaggactgc tgtgaacgct agcgaagccg ccgatgaccc atcccaaagg 901 gccatcaaca agatcatgtc tcaaatcagc ttaggcaagg gaaaccttgc tgttactatg 961 gctgaaatgg acaagacggc tatgcatgtc gcacatacgg cgacgcgcat ctttaaggct 1021 ttaaccgccc taaagcacgc taggtttgga gactttacca aggcgttagg agttacatcc 1081 acacgcaccg aaaataggaa tttctaccga ggcttcagaa aggcgagctc cagagatgga 1141 gtttctcgtc aatctttcgc ttgggataag aagttcaaat ttaaggatac acggaacgag 1201 agccacgtaa gtgacttcct cgccgatact tggttagagt actcctatgg ctggaagcct 1261 atgttaaaag atgtctacga taatgccgaa gcggttgctt cgctgttcgt ggaacatcag 1321 aacatagtac gtacagccaa gggtcgcgct cagtccgaag gtaagtggga aactgaaacg 1381 attccggtta ataaccatat cgtatacaat acccgcgcta ccgataagat ctgggtggag 1441 atcgaagtcc gttataggat tccggtcagc cagcttaacc ctattcacgc cttcggatta 1501 acaaatccga tggaagtggc ctgggagctg gttcccttct ctttcgtcgt cgattggttc 1561 ttgccaatag gtgacgcgat tcgctcactg actgcgttcg atggactcga atatgctggg 1621 ggctacaaga gctcaaagca cgaacggatc tttgaatcgt cggtgaaagg aatcgataag 1681 acgtatgggg gggttcgatg gtttaaccat tcaggtgggg gtagtctgac gagaatcgag 1741 tacgatcaaa ttcgtaccga ccttacaggt ttcccctcat atggatggcc tagattcaag 1801 gaccccagaa gtcttgcgca tggtgcctca gccatagcat tacttcaaag tctattccta 1861 cggaaataat ggaatagcaa cttatcagaa tttctctggt aggcaacttt ctctaagagg 1921 agtagtgatg gcccaacgtg gtaacatcac cttgaccgac gcggcgacaa cgcccgttaa 1981 ccgcgtgtac taccctgtga agtcggcggg cgatattctt ggctggcaag atcggactca 2041 gtccgtttat gccggtcaga atcgtctgac ggtttctcaa cgagtagcca cgaagtccac 2101 gaaagctcat aagatttcgt ggaagctcga gaccccgatc cttgagcaga cctcaccttc 2161 gacgagcacg ggtatccagc ctgcgcctac cgttgcgtac accccagttg gtacgatcga 2221 gctggtcctt ccggaccgta tgagtttgca ggaacgcaag gacctgctgg ctcaaatgcg 2281 cgatctcatc gctgaggcga tcgtgacggc acaggtgcaa gacctggact tcatttactg 2341 aagtgccggc tgaaacgttg acgtggccga ccagctaatc actggaaggc cacgacattc 2401 ccttaatgga taacctaaag gaaaattgtt gcataagcaa tcaattacgc agagcttaaa 2461 gcctgtgtct cgtgaagtgt ccgaaaggac attgatgtct gtttcctcac acttgtttga 2521 ggcaattgat accccacgct cgttggctgc tcatattctc atgaaatacg gagaatatgc 2581 tcagctggtt agcatggaga tcgaccctag tagctatatc tcgattgaaa aatttagata 2641 tgactacctg gctacgaagt ttctctctaa gtttcccgat ttctctcatg agaagttgga 2701 tccgaagggg gaagcccttg tagcatttct caagtatgag gatgcctgca aggcaactaa 2761 tcgaaaaatc ctggaattgc gagaggaccc tagtaaaagg gacccgctta tgtggggcgt 2821 tttgacccta gctaagcgta aaattgctcg cgtcttagga cgagtagatt tagatgccat 2881 tgcagagcac tttggatggg ggcccggcgc aacaacttca gcgtcgggtt cgcacacctc 2941 agcttacatt aagttcgcaa agcgacttga tgtcacgagt aatgctctca tgatggggct 3001 atgctgtgta aacagtacgc cctcctgggt aaactgtcag ttacaaactg atgaataccc 3061 ctctgttagt gcgcatgttt taccaagcgc atttaacata gtacgaggta atgagatcgt 3121 gttcgtgccg aagaatgcga agacccatcg gattattgcc aaggagccac atgtgaattc 3181 atatttgcag aagggcttcg gacattatat ccgtgaacgc cttcgcaccg tcgctcgcat 3241 agatcttaag gatcaaacgc gaaatcagcg actagctaaa gagggatccc taacgggact 3301 ccttgcaacc atcgacttga gtggagcgag tgacactatc tctcacgagt tggtgcgtct 3361 ccttctaccc gatgaatggt tctctttact cgaccaaatc aggagtaaac aaggtttctt 3421 gcgcgagcaa ggaacttggg tttactatca caagttttcc tcaatgggaa atgcgtgtac 3481 tttcgaactc gaaagtctga tattttgggc gctgtgttct gcagtgcttg aaatcaatgg 3541 tggggaacag acactaaatg tttacgggga cgatattatc gtccctgtag agcattatga 3601 gtctgttgcg aacgtaatct cgtatgtagg attctccgtg aacaaaacca aaagttttgc 3661 tagcggtccc tttcgggagt cctgcggaaa agattacttc ctcggcaccg atgtccgtcc 3721 tatctttctg aaagaaagta tctcaaatgc cgaacaactc ctcaagttgg ccaatagcgt 3781 tcgccgttac tcttaccgca gccttaacgg ctacggttgt gatgctcggt ttcacactgt 3841 atggctccat gtcatatcga aattgccaaa agcaattcga gagctccgaa tccctgaagg 3901 cttcggagac attggcttgg tctccaactt tgatgaatcc acgcctagcc tggttcgccc 3961 caaaagggat gaagctggat ggcaagggtt catcttccga ggaattgtcc gacatcccgt 4021 taaacgggaa atgagagata gacatgctgg ttatacagcc actctatttg gacaaggtag 4081 cgcacaacac cagcgaaacc tggacctggg attgggtgac gagtatgcta gacgccctgc 4141 taggcatctt gcaagctctg acactctttc tcgggttaat cagctagtag ttggtcgcga 4201 acgactacct ttgctagggt ctcacgacct gcgcaaacgg acatacccta cggtatcacg 4261 aattcacact cttaggtggt gtgatctcgg gccatggtta tactagtgac atacgtcaca 4321 gccatcatat ggccccttaa gcgatagctt aagtttgttg aagttaattc aactggac //