LOCUS BK013434 4067 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.3_19 genomic sequence, sequence. ACCESSION BK013434 VERSION BK013434.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.3_19 ORGANISM ssRNA phage Gerhypos.3_19 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Mihkrovirus; Mihkrovirus soladaptatum. REFERENCE 1 (bases 1 to 4067) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4067) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN035826.1 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4067 /organism="ssRNA phage Gerhypos.3_19" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786292" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Mihkrovirus; Mihkrovirus Gerhypos.3_19" gene 90..407 /gene="Gerhypos.3_19_1" CDS 90..407 /gene="Gerhypos.3_19_1" /codon_start=1 /product="hypothetical protein" /protein_id="DAD50109.1" /translation="MSLVISVDDAYLEGLMFLPQYSQNPNKVMGLLCALRDKGDTLSN SFENYTRLMRYFAALSRERFAEMLDSVSALASDDELSLLVGVQLTLKTQSRLEAISGR VPD" gene 426..1622 /gene="Gerhypos.3_19_2" CDS 426..1622 /gene="Gerhypos.3_19_2" /codon_start=1 /product="maturation protein" /protein_id="DAD50110.1" /translation="MSLHAFTNEPGTHTKSDGVSGYQRGKYYGSDNLNELVYFDPFTS DIAAKWYPTPGYGLCTDWSRYVRKVIANEPARWRRHETVGNPPDEVVIIELNGDHHIT IDYDLGSYVVPNPGDDNAKSESVTKALNKLTEKYVGIGNDLGEARQTCDSFAHLALRA GGFLNAVKHLRFRLALENLLGYSGKRGTKSLPKTIADLWLEYSYGWKPLAADLYEAQQ LAHKALEKPVPIKATATGHSENQIAFVFDNRLDVKGAVRSSHRTVLHAHVSNPWLANL SQAGLINPVSIAWELVPFSFVVDWFVPIGATLQAITAGVGLESDGGYTSSQTHDALEI KYVTNPGHTGNGFWYDEAGDYRDIGFSFHRQCYTSFPAPQLYADVTPYSTTRALNALA LIKQLT" gene 1688..2077 /gene="Gerhypos.3_19_3" CDS 1688..2077 /gene="Gerhypos.3_19_3" /codon_start=1 /product="coat protein" /protein_id="DAD50111.1" /translation="MTQLTSMVLKDHAGADVTFSPRDITGGVATTVSSTGVPLGDKTA VFSVTRTQAGKRKANLRIALPVVQDVVVSGISRPTIVRTAYFDGTFSFDGASNTVERQ DMLAAIKAMLADTAMITPLIVDLSAPY" gene 2077..2208 /gene="Gerhypos.3_19_4" CDS 2077..2208 /gene="Gerhypos.3_19_4" /codon_start=1 /product="hypothetical protein" /protein_id="DAD50112.1" /translation="MDAGEDPVVGKANAILAVISTLLVPATVVFRLVQSLLRARKRK" gene 2274..3998 /gene="Gerhypos.3_19_5" CDS 2274..3998 /gene="Gerhypos.3_19_5" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50113.1" /translation="MKQRRTPAARVRTPGIPDDLTTQLVERISQLSPSVKTDYLRSEL TSKYVSSLTDPPEVRRTRAINKWLATEAENEATNDRLFITPDTYQIMSRVSYSDFVCW CRDHIAGIIGDTAPIEALIGSFSGGASTSRPRTSSHPSSKFSGNLHVTEHCLGLFIDV VDEMPGWINAQNPMTVEIVKGNVLFTVPKKTDIDRVACKEPDLNMFIQKGIGSYFRSC LRRTGINLNDQSINRSLAREGSITGKLATLDLSSASDSVSSGLVELLLPVTWYTLLDS ARSPVTIIDGEEHRNHMFSSMGNGFTFELESLIFLVLARAVRHFRRDRGVVSVYGDDI ICPTGSVPELTWVLNYFGFSVNLEKSFDSGPFRESCGGHYYDGVDITPFYIRKPIENL EDLIDVANKLRQWGSIPDSILIANEIEPLWLWLKSYVPECLWGGGDTSFKYQLVSNDK SAKRLAETNKRRSTGDGGYYHWLNATWRREEPSDGLETSSMLQNDAAKAPRLRDVREP DVPELTHYFAHELGRVDVLSDWELWKPEGIQAHSEPAARAAWFEVLHGVVTPVYSERP IGELGYGE" ORIGIN 1 cccgtggagt aatccacggg tcgggtctgc ggtgtgcaca tcgtacatcg ccacaggtcg 61 gcattgccgg atcggataag gagtgaacta tgtccctcgt aattagcgtc gatgacgcat 121 acctcgaagg tctgatgttc ctcccacagt attcccagaa ccctaataag gtaatggggt 181 tattgtgtgc actgcgtgat aagggggata cgctttcgaa ttcgttcgaa aactataccc 241 gtctcatgcg gtactttgca gccctttcgc gagagaggtt tgcagagatg cttgattccg 301 taagtgctct tgcatcagat gatgagctgt ctctccttgt gggggtacag cttaccttga 361 agacgcaatc acgcctggag gctatctctg gccgcgtgcc agactagtca acaaaggtac 421 gtcacatgtc tttgcatgcg ttcaccaatg agcctgggac ccacaccaaa agtgatggtg 481 tttccgggta tcaacgggga aagtattatg gttctgataa cttgaatgaa ttggtctact 541 tcgacccgtt cacctcggat atcgctgcga agtggtatcc cacgcctggc tacggcttat 601 gtaccgattg gtccagatac gtgaggaaag ttatcgcaaa tgaacctgcc cgatggcgtc 661 gtcatgagac ggtgggaaat ccaccggacg aagtcgtcat aatcgaactc aatggtgacc 721 accatatcac tatcgattat gatctaggct cgtatgttgt ccctaatcca ggggatgata 781 atgcgaagtc cgagtcggtc acgaaagcct tgaacaaact taccgaaaag tatgtcggta 841 taggtaatga tctcggcgaa gcaagacaga catgtgacag tttcgcgcac ctagccttga 901 gggctggcgg ctttctcaat gccgtcaaac atctcaggtt taggttggct ttggagaacc 961 ttctgggtta ctccggcaaa cgcggaacca agtctttgcc taaaaccatt gcagacctct 1021 ggttggagta cagctacggt tggaaaccgt tagctgccga cctttacgag gcgcagcaat 1081 tggcgcataa ggcgcttgag aagccggtgc ctatcaaggc gacggcaacg gggcactctg 1141 agaaccagat tgccttcgtg ttcgataacc gattggatgt taagggcgcc gtgcgcagtt 1201 cacacaggac tgtgctacat gctcacgtgt ctaatccatg gttagcgaat ctctctcaag 1261 caggactaat caaccctgtt tcgattgctt gggaacttgt tcctttctcc tttgttgtcg 1321 attggtttgt tccaatcggc gcaacgttgc aagcgattac cgcaggcgtt ggccttgaaa 1381 gtgacggtgg atacacttcg tctcaaacgc acgatgcact tgaaataaag tacgtcacga 1441 acccgggtca taccgggaac ggcttttggt acgatgaggc aggagattac cgcgacatcg 1501 gtttctcttt tcatcggcaa tgctatacga gcttcccagc tccgcagctc tatgccgatg 1561 ttacgcctta ctccaccacc cgcgcgctca acgccttggc gttgatcaag caactcacgt 1621 agcatcccgc tcgtgattac cctcggctgc actaatgtac ctgtgcagtt ccaactagga 1681 atatactatg acccagttga cttccatggt cctcaaagac catgccggtg cggacgtaac 1741 gttctcacct cgtgacatca ccggtggtgt cgcgaccacg gtctcgtcga ccggcgttcc 1801 cctcggagat aagacggctg tcttctccgt tacgaggacg caagccggca agcgtaaggc 1861 gaatcttcgg attgccttgc ctgtcgtgca ggacgtggtc gtgtccggga tctcccgccc 1921 aacgattgtg cgtaccgcct acttcgacgg tacgttctcg tttgacgggg cctcgaacac 1981 tgtcgaacgt caggacatgc tcgccgcgat taaggccatg ttggccgata ccgcgatgat 2041 cacgcctctg attgtcgacc tctcggcgcc ctactaatgg acgccggtga ggacccggtg 2101 gttggaaagg cgaacgctat cttagcggtt atcagcacct tgctggttcc cgcgacggtg 2161 gtgttccgtc tcgttcaatc actgcttcgg gcaagaaagc ggaaataagc actccgttaa 2221 ttgtcagcct gtttggcagc ccgccaacag gttctccatg ataggatatc ctcatgaagc 2281 aaagaagaac ccctgcagct cgcgtgcgaa ctccaggaat tccggacgac ttaaccaccc 2341 agctcgttga gaggatctct caactctctc cctcagtgaa aactgattac cttaggagtg 2401 agttgacctc aaaatacgtt tcttcactta ccgatccccc agaagtaagg aggacgcgtg 2461 ccataaacaa gtggctcgca acggaagcgg agaatgaggc gacgaatgat aggcttttca 2521 ttaccccgga cacataccaa atcatgtcca gggtgtccta ttctgacttc gtctgctggt 2581 gtcgcgatca catcgctggc atcataggtg acacggctcc cattgaggcc ctcatcgggt 2641 ccttttctgg gggtgcgtca actagtcggc cacgtacttc gagccatcca agctcgaagt 2701 tctccggaaa ccttcacgtt actgaacact gtctcggtct tttcatcgat gttgttgatg 2761 agatgccggg atggatcaat gctcagaacc caatgacggt ggaaatcgtc aaagggaacg 2821 tgttgtttac tgttccaaag aaaaccgata tagatcgtgt cgcttgtaaa gagcccgatc 2881 tgaatatgtt catccagaag ggtattggta gctatttccg tagttgccta cgccgtaccg 2941 ggattaacct gaacgaccag tcgataaacc ggtcgctcgc acgtgaagga agtatcacag 3001 gaaagctcgc tactcttgat cttagtagcg caagcgattc tgtgtcttca gggctcgtag 3061 agctccttct tcccgtgact tggtacaccc tcctggactc cgcaaggagt ccagtcacca 3121 taatcgatgg tgaggaacat cggaaccaca tgttctcttc gatgggaaac ggattcacct 3181 ttgagctcga gagtttgatc tttctcgtgc ttgctagggc cgttcgccat tttcggaggg 3241 accgtggtgt cgtcagtgtc tacggtgatg atatcatctg cccaacgggc agtgtaccag 3301 aactcacttg ggttttgaat tatttcggct tctccgttaa cttggagaaa tcgtttgatt 3361 cggggccttt tcgtgagtct tgcggaggtc attactacga tggtgtcgat ataactcctt 3421 tctacattcg gaaaccgatt gagaacctgg aggaccttat tgatgtggcc aacaagctgc 3481 gtcagtgggg atcaatcccg gacagcattc tcattgctaa tgaaatagag cccttgtggc 3541 tctggctcaa aagctacgtt cccgagtgcc tttggggtgg tggtgataca tcgttcaagt 3601 accagttggt cagtaatgac aagtctgcga aaaggttggc ggaaaccaac aaacgcagat 3661 caactggtga tggcggttat taccactggc taaatgccac ttggagacgc gaagaaccct 3721 ctgacgggct tgaaacctcg tcaatgcttc aaaacgacgc cgcgaaagcg ccgcgtttga 3781 gggatgttcg tgaacctgat gtacctgagc tcacacacta ctttgcccac gagttgggta 3841 gggtagatgt attgagcgac tgggagctat ggaaaccgga agggatccaa gcccacagcg 3901 agccagcggc gagagccgcc tggtttgagg tgctacatgg tgtagtgact cctgtatatt 3961 cagaacgccc gataggcgaa ctgggttacg gcgagtaatt ccgggggata ccccgaaatc 4021 ccggcgatgc cgggtgggtc actcacgctt aaccgcgtgg gtgaaac //