LOCUS BK013982 3941 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.3_8 genomic sequence. ACCESSION BK013982 VERSION BK013982.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.3_8 ORGANISM ssRNA phage Gerhypos.3_8 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus geovicinum. REFERENCE 1 (bases 1 to 3941) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3941) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN035989 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3941 /organism="ssRNA phage Gerhypos.3_8" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786307" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus Gerhypos.3_8" gene 165..1478 /gene="Gerhypos.3_8_1" CDS 165..1478 /gene="Gerhypos.3_8_1" /codon_start=1 /product="maturation protein" /protein_id="DAD52025.1" /translation="MEDNLVKQSRVHYRFQLQGRAGLRYGGPDQPLSWVTSLPGEVVT CKQTTTSHRGSDLANRTVADLLGQYDATKPVTDNGHEFRTEKQSIHFSIPHIDFSGRD VEFHGPWGYGSYGTYWDNNFPVAPQVSQNDIRVYGTKAINQAIPTKSAASLAQFLGEL REGLPALVGVNLLRGKGSTNSIGSEYLNYQFGIAPLLNDIKKFASAVKNSSRIIKQYE RDSGRVVRRKRGLSGLTLNTHEETELSKWEAVGQPQYVSGWYPDFWNSFRNSGGKTES SVTQIYHTTRRAWFSGAFSYYLNSGDDVIARFDRYEQLANKLLGTRLTLEVLYQLTPW SWLADWFADIGDIISSASAFASDRLVLRYGYLMVHTVSRNQFTSSAVLPSGQRIHPST EYKTERKERFRASPYGFGIDSSAFTDYQWAILGALGMTKAPRSLR" gene 1567..1929 /gene="Gerhypos.3_8_2" CDS 1567..1929 /gene="Gerhypos.3_8_2" /codon_start=1 /product="coat protein" /protein_id="DAD52026.1" /translation="MAFNDPQSLTLAGTAVSLPRTSSADGSGAFTSNDGTAQLTVSNQ YGKRIRRQARVSYSKVAPDPLIASQNIRYSASVYMVVDQPVTGFTVAELSDIVKAFTA WLSANTNANTTKLLGGEN" gene 2099..3904 /gene="Gerhypos.3_8_3" CDS 2099..3904 /gene="Gerhypos.3_8_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD52027.1" /translation="MKSLSYLLKEVLDESGTWCHVSTDRDWKTISARFEDEGSSFLTI TLPKFGKDLEKGLDQGRVDRHLFAGFSRKGELPRLFGGFLDLIFDRESGVLLDSPSID AIRCLRQITLMMAKVALQCSPERVTAAIDGYVKCEQDVKVHDALFNSDPDLRERFGRM GSLLWGNLFSKIDREIYDGEIVPRHGPGATADKLKGNQKFNQFEWPRRVEEIFPSGEF LFSSWSLFFDNEQSVDILEPGAERPVKVITVPKTLSSPRIIAVEPTAMQYVQQGILRS LVQNIRADDNARNLIGFEDQTPNQHLAEKGSTDQSLATLDLSEASDRVSNEHVRYLLR NHSHFAWGVDACRSRKARVPGHGVIRLSKFASMGSALCFPFEAIVFCTVIFLGIEQAL NTQLTKEDVKSFFGRVRVYGDDIIVPVEYASTVVTTLELFGFKVNTNKSFWNGKFRES CGKDYYHGEDVSVVRVRELLPSQRQHAREIVSTVSLRNQLYKAGYWRTVKWLDGKLER IIPFPHVAETSPVLGRHSFLGYETERLSFDHHRPQVKGMVVSTRLPDSVLDGPGALLK YFLNASDLPVTDKEHLLRAGRPVSVDIKHRWANSY" ORIGIN 1 ccctttgcgg gtcccaccgg tgcttagtca ccatcgctac ctgctagatt ttagcagttg 61 cgatctttca ctaccctatt agctcaaacg tagcagtgca tccgattgag cagtgatgta 121 aggtagtgtt cccatttatt gtctattagc ataaggaaac tctcatggag gataatctcg 181 tcaaacagag tcgtgtccat tatagatttc agttgcaggg ccgtgccgga ctccggtacg 241 gcgggcctga tcaaccgtta tcttgggtga cttctctgcc aggcgaggtt gttacttgta 301 aacaaactac cacgagtcat cgtggttctg atttggctaa tcgcactgtt gctgacctac 361 ttggtcagta tgatgcgacg aaacctgtca cggataatgg tcacgaattt cgtactgaga 421 agcagagtat tcatttctct attcctcaca tcgactttag tggccgtgac gtagaattcc 481 atggcccttg gggttatggg tcctacggca cttactggga taataacttt cctgtcgcac 541 cacaggtgtc acaaaatgac atccgggtat acggcacgaa ggctattaac caggctatcc 601 cgactaaatc agccgcttcc cttgctcagt tcttgggcga gctcagagag ggtcttcccg 661 ctctggttgg tgtcaatctc ctcagaggta aaggttctac gaactcaatt gggtccgagt 721 atcttaatta ccaatttggc attgcacccc tcttgaatga tatcaagaag ttcgccagtg 781 ctgttaagaa ttcttcaaga attattaaac agtacgaacg cgactctggc agagtcgtgc 841 gaaggaagcg cggtttgtcc ggtcttaccc tcaacactca cgaagagaca gaattgtcta 901 aatgggaggc tgttgggcag ccacagtatg tttcaggctg gtatccagac ttctggaatt 961 ccttccgtaa cagtggcgga aagaccgaat cgtcagttac ccagatttac cacacgactc 1021 gtcgtgcttg gttttctggg gctttctcgt attatcttaa cagtggtgac gatgtcatcg 1081 ctcgttttga taggtacgag cagctagcta ataagctgct gggtactcgc ctcactcttg 1141 aggtattgta ccaactgacg ccatggagtt ggcttgccga ctggtttgca gacattggag 1201 acattatttc cagtgcttct gcttttgcca gtgacaggct tgtgcttcgg tatggttacc 1261 ttatggtcca taccgtctct cggaaccagt ttactagttc cgccgtcttg ccctctggac 1321 aaaggattca tccttctacg gagtacaaaa cggagcgcaa agagcgcttt agagcatctc 1381 cttatggatt cggcattgat tcatcggctt tcaccgatta tcaatgggcg attcttggtg 1441 cgcttggtat gaccaaggca ccccgtagtc tgaggtaata gacagcctta cgctacatca 1501 ccgtgctgca ataatgcatc acgtttcatg aacgccggga tggcgtccta aacaaagaag 1561 agtgctatgg catttaatga tcctcagtcc ctcacccttg ctggcactgc tgtttcgctt 1621 ccgcgaacca gctctgccga tggctcgggc gcatttacat cgaatgatgg aactgcgcag 1681 ctcaccgtct ctaatcagta cggtaagcgt atccgtcgcc aggcacgggt ttcgtattct 1741 aaggttgctc ctgacccgct gatcgcctcc cagaacattc gctattcggc gagtgtttac 1801 atggttgttg accagcccgt caccggtttt accgttgcgg agctttccga cattgtcaag 1861 gcctttacgg cttggctgtc ggcgaatacg aacgcaaaca ccaccaagct tcttggtggt 1921 gaaaactaat gacgcaggtg ccggtagatt tgattctact cgcgtgtgtc gccgttggtt 1981 ttctggccct aggacctttt aggtccgttg ggtttgcgcg agggcgtcac tgacgtctac 2041 gtgcagggaa cattagatat cttagctaag gaagatctaa ctctgttagg agcagacctt 2101 gaaaagccta agttatcttc tgaaagaggt tctggatgaa tccggaacct ggtgtcatgt 2161 cagcaccgac agagattgga aaacaatctc tgcccgtttc gaagatgaag ggtcatcgtt 2221 tcttacgata accttaccca aatttggtaa agacctcgaa aaaggtctcg accaagggcg 2281 ggtagatcgc catcttttcg ctggtttcag tcgaaaagga gagctccccc gtttattcgg 2341 aggttttctc gatcttatct tcgatcgcga atctggtgtg ttgcttgact caccttcaat 2401 tgatgcaatc cgttgtcttc gtcagatcac tctgatgatg gcaaaggtgg cgttgcagtg 2461 ctctccggag cgggtcaccg ccgcaattga tgggtacgtc aagtgtgagc aggatgtcaa 2521 agtccatgac gctcttttca atagcgatcc cgatcttcgg gagcgctttg ggcgcatggg 2581 atctttgttg tggggtaatc ttttttccaa aatcgatcgc gagatctatg atggagagat 2641 tgttccacgg cacggacccg gggcgaccgc tgataaacta aagggtaacc agaagtttaa 2701 tcagtttgag tggcctcgcc gagttgagga aatcttccct tccggggagt ttctgttctc 2761 ttcttggtcg ctgtttttcg acaacgagca atccgttgac atcctcgaac ctggagctga 2821 gagacccgtt aaggtgatca cagttcctaa gacgctctct tcgccaagaa ttatcgcagt 2881 tgaacctact gccatgcaat atgtgcagca ggggatcctg cgtagtcttg ttcagaatat 2941 ccgcgcagat gataatgcgc ggaatctgat aggtttcgaa gaccaaaccc ctaatcagca 3001 ccttgctgaa aagggttcga ccgatcagag tcttgcgact ctcgatcttt cggaggcttc 3061 ggaccgcgtt tcgaacgagc atgtacgata tctgcttcgc aatcactccc attttgcatg 3121 gggtgttgac gcatgtagat ctcggaaggc tcgtgtacct ggacatggcg ttatccgtct 3181 atccaagttc gcgtctatgg gttcagcgct ttgcttccct ttcgaagcca tcgtgttttg 3241 cacggtgatc ttcttgggaa ttgagcaagc gctcaacaca cagttgacca aagaggacgt 3301 taagtctttc tttggccggg tgcgcgtcta cggtgacgat attattgtcc ccgtagagta 3361 tgcatctacc gttgtgacta cccttgagct ttttggtttc aaggttaaca ccaacaagtc 3421 tttctggaat gggaaattcc gtgagtcttg cgggaaggat tactatcacg gcgaggacgt 3481 tagtgttgtc cgcgttcgtg agttgttgcc ttcacaacgg cagcacgcta gggaaatcgt 3541 ttctactgtc tctcttcgta atcagcttta caaagcaggt tattggagga cagtgaaatg 3601 gcttgacggc aagttggagc ggattattcc gttccctcat gtcgccgaga cctccccagt 3661 gttgggtcgg cacagttttc tcggttacga aaccgagagg ctgagcttcg atcatcaccg 3721 tccccaagtc aagggaatgg tggtgtcgac aaggcttcca gattcagttc tggatggccc 3781 tggcgctctg ctgaagtact tcttgaatgc cagtgatttg ccagtcactg acaaggagca 3841 tcttctgcgt gctggacgtc ctgtgtccgt cgacatcaag cacaggtggg ccaactccta 3901 ttaagggagc tggcggggtt taatttcacc ccatcaggga g //