LOCUS BK013926 4188 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.4_12 genomic sequence. ACCESSION BK013926 VERSION BK013926.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.4_12 ORGANISM ssRNA phage Gerhypos.4_12 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Pujohnavirus; Pujohnavirus chthonovicinum. REFERENCE 1 (bases 1 to 4188) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4188) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN036261 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4188 /organism="ssRNA phage Gerhypos.4_12" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786312" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Pujohnavirus; Pujohnavirus Gerhypos.4_12" gene 85..1218 /gene="Gerhypos.4_12_1" CDS 85..1218 /gene="Gerhypos.4_12_1" /codon_start=1 /product="maturation protein" /protein_id="DAD51810.1" /translation="MALRTRETILPEPCGYMVRSFVQYGPFPDIVTYRKTTVDEVDVG DNRNFDSEEYRWQGGRINYDAGPGTGMSVNFLADGWRNHIAAGGNQHMLIPDEPSDIA LATTAAARTNPSRPYVDVPAEVLQLGDLTRLVQSAGRNLIRQAANANLSYQFGIKPIV DDITKIISFHEQVSRRAQEIERLRSSRGLRRTIKIGDLYSGEISYGPDGGGLIQSVFW FILSEPAYGMTYSKAGAHVRWKPSMDLSHLAADQMLGIAKKAVLGLTVDFSTVWELLP WSWLIDYAYNASEFFRATRNIVPAEISEISVTKTKRSHFWSSYREGYVNGALMNLTGV EETRLTKYRHRVDTISPVAHLPFLSANQMGILGSLAVTRVIPR" gene 1252..1614 /gene="Gerhypos.4_12_2" CDS 1252..1614 /gene="Gerhypos.4_12_2" /codon_start=1 /product="coat protein" /protein_id="DAD51811.1" /translation="MFADPAVVTINAVAKNLVRINQDKYSSEYLLRTSTEEHRLFIRN TSYVDKRRGVTIDRHNVEIVNTVFPVAPATTSIVRKTYTVIENQQGDTLVDPRNVALG LFAFLSSAKIDQLMNLES" gene 1689..3932 /gene="Gerhypos.4_12_3" CDS 1689..3932 /gene="Gerhypos.4_12_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51812.1" /translation="MMKSQVNALLLVEKGLLTDASSAYPALRESFLKDMGRLTLNCQS RGLGFFTLDLPNLDSLLLKGLESGRLVLEGPASKPVSKRVKVPRLFSGLWLRVFDKDA CLKQEVDVTALAFIRQLCVIGKKLEVECTHERRNAVAEAYHDIEAKLRRPTLQWDNDN FGIEWPSLGGVTQLVGVDGGSLPSDQLDLPIKFPISGMLNGSHYGDLSIPAISRVEGQ RNGKGSFPRWSGGKGPGHLVQALDHLDRGPLFNSQVLHEGGGTEGTGAGFPFSKLEDQ RLLNRVQNVADLIIERFRTYDPLLFSEECEESFGAIGFKHGPGAVAERLRGWNKSSFP NWSAKLDAVFPFEQVGKTANSDVARPLNHEVPSRLIGVPKTAKGPRLIAAESVSHQWC QQLTWQFLQGECHRLFGDDFLTFRDQSHSGNMAIQASKDRKLATVDLSDASDRLSCWT VERMFRKSPSLLVALHAARTRYLRDEVSEKMDFLLLRKFASQGTATTFPIMSLTMLFI ALGCTLDGEVTWKKIMACRNQVRVFGDDIILPSHGYARLLRVMELLQLKINMAKSYVN GGFRESCGVDGYDGYDVTPVKPQKIVADGPASCQAVVDISNNLFNKGYWHASTACVHL LPPRVQRGLRMVDRNDAGLSGLYSHSGGNESHLSKRWNSSLHRWEVRTWSSSERKTTR PREGYATLLDFLSNKHSHERARTVSEYVAIRKTKAGLSWEPSRYHDHVSSPSGADFFS RSFSSAS" ORIGIN 1 ccgtgttaac gggcctacat gtcttcacca ttagggatta ataaccccta ttgttgagac 61 gtccctcttc tggagtgaat taacatggcg ttacgtacaa gagaaacgat tttgccagag 121 ccttgcggct atatggttag gtcgtttgtc caatacggac cattccccga tatcgtcacc 181 tatagaaaaa ctacagttga cgaagtcgat gtcggtgata atcggaattt cgattccgaa 241 gaataccgat ggcaaggtgg tcgaatcaac tatgatgccg gtccagggac aggaatgtcc 301 gtgaactttt tggcagatgg ttggcgaaac cacattgctg ctggtgggaa ccagcacatg 361 ttaattcccg atgaaccaag cgatatcgcg ttagcgacta ccgctgctgc acgtactaat 421 ccgtcgcgtc catacgtgga cgttccggct gaggtattgc agctagggga tttgactagg 481 ctagtccaaa gcgctgggag aaatctcatt cgccaggctg ccaatgcaaa tctgtcatac 541 caatttggga ttaaacccat agttgatgac attacgaaga ttatcagttt tcatgagcaa 601 gtttcacgac gagctcagga aattgaacgt cttcgttctt cccgaggttt acggcgtacc 661 atcaaaatcg gagacttata ttccggcgag atcagttatg gtcccgacgg aggtggtctt 721 attcaatccg tattctggtt cattttaagt gaaccggctt atggaatgac atatagcaag 781 gctggagccc atgttaggtg gaaacctagc atggatctct ctcatcttgc tgccgatcag 841 atgcttggaa ttgccaagaa agcggtatta ggcctaactg tcgatttttc gactgtctgg 901 gaacttttac cgtggtcttg gctaatcgac tacgcatata atgctagtga gttctttcga 961 gccactcgca atattgtgcc tgccgagatt agtgaaattt ctgtcactaa aaccaagcgc 1021 tctcatttct ggtctagtta tcgtgaaggc tacgtaaacg gagccctcat gaaccttacc 1081 ggtgtcgagg aaactcgact aactaagtac cgtcacagag tggatacgat atctccagtt 1141 gcccatttgc cgtttctttc ggcaaaccag atgggtatcc ttgggtcgtt ggcggtgact 1201 cgggtaatac cccgataatc actgccaatt aaccaagaat ggaagtagaa tatgttcgca 1261 gatccagcag ttgttaccat caatgcggtg gccaagaacc ttgttcgaat taatcaggat 1321 aagtattctt cggaatacct cctgaggact tcgaccgagg aacatcggct tttcatccgg 1381 aacacttcat atgttgacaa gcgccgcggt gtgacgattg atcgtcacaa cgtcgagatt 1441 gtcaacactg tgtttccagt tgcaccggcg actacctcta ttgtgaggaa gacgtacacg 1501 gttatcgaaa atcagcaggg tgataccctt gttgatccga gaaacgtggc gttgggcctc 1561 tttgcattct tgtcgagtgc taagatcgac caactgatga acctcgagtc ctagtaaact 1621 aggaaagaaa ctcaaggtta ctactgtgct tctgcggctt ggaatcaaca ctgtcccaaa 1681 aggatacaat gatgaaaagc caagtgaatg ctctacttct cgttgagaag gggctcctta 1741 cggatgcctc ttctgcatac ccggcattga gggagagttt tctcaaagat atgggaagac 1801 ttacccttaa ttgtcaaagt cggggattag ggttctttac cctagacctt ccaaacttgg 1861 actctttatt actaaagggt cttgagtctg ggcgactagt ccttgaagga ccggcttcaa 1921 agccggtatc taaaagggtc aaagtgccga gattattctc gggactatgg cttcgcgtct 1981 ttgacaagga tgcttgtttg aagcaggaag tagatgtcac tgctcttgct tttatccggc 2041 aactttgtgt tatcggaaag aagcttgagg tagaatgcac tcacgaacgc agaaatgcgg 2101 ttgcggaggc ataccatgac atcgaagcaa agttacgtag acccacttta caatgggata 2161 acgataactt tgggatcgag tggccctccc ttgggggggt cacccagttg gtcggcgtgg 2221 atggcggaag ccttccatcc gatcaattgg acctacctat taagtttccc atatctggga 2281 tgcttaatgg ttctcattat ggtgatctct ctatccctgc aattagcaga gtagaaggac 2341 agcgtaatgg gaaaggttcg tttcctcgtt ggtctggtgg caaaggtcct ggacatcttg 2401 tccaagccct cgatcacctt gataggggtc ctctcttcaa ttctcaagtc ctccacgaag 2461 gtggaggaac cgaaggaact ggagccggat tccccttttc taaattagaa gaccaacgac 2521 tccttaatcg agtccaaaat gttgcggact tgattattga acgtttccga acgtatgatc 2581 cgcttctctt ttctgaggag tgcgaagaat cgttcggagc gatcggcttc aaacatggtc 2641 ctggcgctgt tgctgaacga ttgagaggtt ggaataaatc cagtttccct aattggtcag 2701 ctaagcttga tgccgtattt ccgttcgagc aggtgggtaa aaccgccaac tcggacgtgg 2761 ctaggcccct caatcatgag gtacctagtc gcctgattgg tgttcctaag accgctaaag 2821 gtcctaggtt aattgctgcg gaatctgttt ctcaccaatg gtgtcaacag cttacgtggc 2881 agtttctcca aggtgagtgc catcgtcttt ttggcgatga ctttctcacc tttagagatc 2941 agtcccattc aggtaatatg gctatacaag cttccaaaga tagaaaactt gcgaccgttg 3001 atttatcgga cgctagtgat cgtctttcgt gttggaccgt ggagcgaatg tttaggaagt 3061 ctccttcctt acttgtcgct ctgcacgccg cacgtacgag gtatctcaga gatgaggtgt 3121 ctgaaaagat ggacttcctg ttactacgga agttcgcctc gcagggtaca gcaactacat 3181 ttcccattat gtctcttact atgttattca tcgccttggg ttgtaccctt gatggtgaag 3241 ttacatggaa gaagataatg gcatgtagaa accaggttcg tgtgtttggc gatgatatta 3301 tattgccatc acacgggtat gcgcgacttc ttcgagttat ggagctcctc caactcaaga 3361 ttaacatggc taagagctat gttaatggtg ggtttaggga gtcctgtggc gtagatggat 3421 acgatggtta cgatgtaacc cccgtaaaac cacagaagat agtcgccgac ggtccggcat 3481 cgtgccaggc tgtagtagac atatcaaata acctctttaa taaaggatat tggcatgcaa 3541 gtacagcctg cgtccacctt cttcctccac gtgtacaacg tggactcagg atggtggata 3601 gaaacgacgc tggactctcc ggtctctact ctcacagtgg aggcaatgaa tctcatcttt 3661 cgaaaagatg gaattctagc ctgcatcggt gggaagtcag aacctggtct tcctccgaaa 3721 ggaagaccac tagaccgaga gaaggatatg caacattgtt ggatttctta tccaacaagc 3781 acagtcatga gcgtgctcgg actgtgtctg aatatgttgc aatccgaaag accaaagctg 3841 gtctttcatg ggagccctct cgttatcacg atcacgtatc ttctccatct ggagcagact 3901 tcttctctag atcgttttct agcgcaagct agtctcgata tagcgaattc cggattaact 3961 gaggttgatg taatcttcct caatgaacac ggtttaagtt tgccaaggtg gatagatcgt 4021 aatgatcttg accaagcttt aacatatgtt aggggttaac cctaacatat gcatcgtaag 4081 atgtagcttg tcctcttgaa ctaacgaggt aacgattggg tggtggagtt aaaatgaaag 4141 ggaatatctt cagattccaa cctgaaggga acccctactc catgggtg //