LOCUS BK013551 4699 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.4_2 genomic sequence, sequence. ACCESSION BK013551 VERSION BK013551.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.4_2 ORGANISM ssRNA phage Gerhypos.4_2 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Psehatovirus; Psehatovirus edaphovivens. REFERENCE 1 (bases 1 to 4699) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4699) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN034847.1 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4699 /organism="ssRNA phage Gerhypos.4_2" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786320" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Psehatovirus; Psehatovirus Gerhypos.4_2" gene 21..203 /gene="Gerhypos.4_2_1" CDS 21..203 /gene="Gerhypos.4_2_1" /codon_start=1 /product="hypothetical protein" /protein_id="DAD50530.1" /translation="MDDAVRRKLLLQEYSTYVAIIRQKGLEYHPFSDKDIEKMPIIDL SVIVRHARDIARTPSE" gene 467..631 /gene="Gerhypos.4_2_2" CDS 467..631 /gene="Gerhypos.4_2_2" /codon_start=1 /product="hypothetical protein" /protein_id="DAD50531.1" /translation="MDDQDITKGLIDPQLAFAVISLILCFILADVSCDSSIEDLIAVL INLLNLGDVK" gene 628..2292 /gene="Gerhypos.4_2_3" CDS 628..2292 /gene="Gerhypos.4_2_3" /codon_start=1 /product="maturation protein" /protein_id="DAD50532.1" /translation="MTTPWPPEFSDTSVTALSRRGGGIIGIPQVRYGEFHSLDVIGKD GRVLQTSGTYDLSEELKISLNVPPNLAKGASLVYTVMITEPTQMPAIGTFYEDLYPKV KKYPSGPKIFSSRDPTVTRRKGNLTTRLHTELKRSAGGGFGGSSAGSQRPSAELTTTR MSSTAWNSSGGSSTRPQIDVEDYERHWTGSRTPGYRKILRDGGRLPINAHTVSMWRAS IGYCAKRTDDPGTVSGSPFRSAELAPMSTFFGFPSGPVHLEQALRVATSKLVKFSGNE IEGNLAQDLAQFGQTASLISGTLNRITGSVKALKRGNISAAVTALWQNGNPRFRKGGG PSHTKDLANNWLELQYGWKPLLKDIEGTINSLKKFHNSSSNSILHAASNATAQDSTDI TFSSGLSPKGGRVQTSTITKVHKAMNYRVSSRTLAFLAQTGFTNPINLLWEVLPWSFV VDWVLPVGPYLESLSAFHGMEFLDGYSVAFTRQITSVSVSDGGPFPGFPSATSDINGS MNREWIILSREKLLDFPDQAPPSFRNPLSGMHAANALALLVQVFKR" gene 2330..2815 /gene="Gerhypos.4_2_4" CDS 2330..2815 /gene="Gerhypos.4_2_4" /codon_start=1 /product="coat protein" /protein_id="DAD50533.1" /translation="MPAIAAIKTSSIIAGTESTTSATVGVDKTFDPEGFMLPGVARWC DRSGGIAIGYPRFSLSVRPPTKTSRVYKVTAKLVLPTLEVTAPSTATGIQPAPTKAYD CLCVMEFMLPERSTAVERAALLSHVRSLLATTVQASDASPSDATGSPLIAAVTNFEPA Y" gene 2855..4645 /gene="Gerhypos.4_2_5" CDS 2855..4645 /gene="Gerhypos.4_2_5" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50534.1" /translation="MSSKKYGSNFLKGVREYRVGPEVTSDAISQFLESLDCPRSLAVL ILFRNGEHQQLLDLEFDPSYYLTGNDCRDAYAATKFLSKYKDLSLDRDLDDVAKKKFL EFELLCKQTNARFRKLEHDQKFTSHVVWLHNAVVRKISNILGEFSPQDFFEMPDWGPG ASTLIKRRFASSTNKFQCETGITRELHALIPTELLREVYPLWAAHLADSKFPDYQVGN RVVTVPKDAKTNRVIAIEPGMNLWFQKSIGDMIGLKLRRCGNDLRYQSRNQELARSSS ITDELATIDFSSASDSISYSVVRELLPKRWFEVMDSCRSHFGSLDGKLFRWEKFSSMG NGFTFQLESLIFFAAAYCCAEYIGLDYKSIDKRVSAYGDDVIVPSACLGIFSDLMDFY GFRINGDKSYYNSPFRESCGSHYYRGLDLKPVYLKDRLSSLQTVFRLANAFRRFSHRF YQNIGDFCDIRQRGVFEHLVHKVPSAFRLRIPHHIGDGGFISNFDEATPSRARFGIEG YFVYTLSEVSKTYQEDRVGYLLSNLWAMPNLAVPINWGAEGQTRLQAIERLVQVSPKD GRNSVHLVGDLKLRISKSLVQQWCNLGEWI" ORIGIN 1 aaaccgacca tggaggttct atggacgatg cagtaagaag gaaactcctg ttacaggagt 61 attcgactta cgtcgctatc attcgtcaga aggggttaga gtatcatccc ttttcggaca 121 aagatatcga gaaaatgcct atcattgacc tttcggtcat tgttcggcat gctcgtgaca 181 tagcacggac accatcagag taatctgtta aggttcgccg cctcgtagat gtcttggaag 241 cccttacggg cctacaggct cttggactgc gttcacttaa cttatgatgg atccatgagg 301 gaggatatga agttcgccct gcgtcgggtg tcccgtattc cgtgtattac gtggaatacg 361 tcgcactctt tgcagggctc ttttctcctc tctaattcct atggttagct caaagcggag 421 tactttagcg cctaatagcg cttggtcaac tttctaggag acaggaatgg acgatcagga 481 tattactaag ggtttgattg atccgcagct tgcttttgct gtgatcagtc tcatcttatg 541 ttttatcttg gcggacgttt cctgtgactc ctcgatagaa gacctaatcg ccgtgctcat 601 taacctcctt aaccttggag acgtcaaatg acaactccat ggcctccgga gtttagtgat 661 acttctgtta cagccctttc gcggcggggt ggcgggatta ttggtatccc tcaagttcgt 721 tacggtgaat tccatagtct cgatgtcatt ggcaaagatg gtcgggttct tcagacgtct 781 ggcacctacg atttatcgga ggagcttaag attagtctga atgtgccccc caacttagcc 841 aagggcgcga gcttagtcta caccgtaatg attactgagc ctacccagat gccggccata 901 ggtaccttct atgaagatct ttacccgaag gttaaaaaat acccttcagg accaaagatc 961 ttttctagtc gggaccctac tgtcacgcgt aggaaaggaa atcttactac gcgcctgcac 1021 accgaactga aaagatcagc cggtggggga ttcggaggtt catcggcagg atctcaacgg 1081 cccagtgccg agttgaccac aacccgtatg tctagcacag cctggaactc gtctgggggc 1141 agtagcactc gcccacagat tgatgtcgaa gactatgaga ggcattggac tggttctcgg 1201 acccctgggt atcggaagat cctgcgtgat ggaggccgtt tgcctataaa tgcgcatacg 1261 gtctcaatgt ggcgtgcatc gatcgggtat tgcgcgaaac gtactgatga cccgggtact 1321 gtttccggtt cacctttccg ttccgcagaa cttgcgccga tgtccacatt cttcggtttc 1381 ccgtcaggac ctgttcactt ggaacaggcg ttacgtgttg ccacttcaaa gctggttaag 1441 ttttccggaa acgagataga aggtaatctc gctcaggacc ttgcccagtt tggacagacc 1501 gcttcgttga tttctggtac tttaaacagg ataacagggt ctgtcaaagc actgaagcgg 1561 gggaatatct ccgcagcggt gacggcgttg tggcagaatg ggaaccctcg gtttcgcaaa 1621 ggcggtggcc cctctcatac gaaggatctt gccaataatt ggctcgagct ccagtatggc 1681 tggaaaccac tccttaagga tatcgaaggc accattaatt cgttgaagaa gtttcataac 1741 tcttcttcga atagcatcct gcacgcagcc tcgaatgcga cagctcagga cagtactgac 1801 atcactttta gttctggcct ttcacctaag ggtggtaggg tgcaaacctc taccattacg 1861 aaggtgcata aggcaatgaa ctatcgtgta agtagtcgga cgctggcctt tctggcgcag 1921 acgggattca caaatcccat aaatctactg tgggaagttc tcccgtggtc tttcgtcgtg 1981 gactgggtac tccccgtcgg cccctacctt gaatcgcttt cggcttttca tggtatggag 2041 ttcctcgatg ggtactcggt agcctttacg agacagatca cttctgtatc cgtatcggat 2101 ggaggcccgt tccctgggtt ccctagcgct actagtgaca ttaacggttc tatgaaccga 2161 gaatggatca tcctgtctcg cgagaagctt ttagacttcc ccgaccaggc gccaccttca 2221 ttccggaatc ctttatccgg gatgcatgcg gctaacgctt tggccctctt ggttcaggtc 2281 ttcaaacggt agaatacgga tactccatgt tttaacaagg agtactgata tgcccgctat 2341 tgcggctatc aaaacctcgt ccattatcgc gggaaccgag agtacaacct cggcgaccgt 2401 gggcgtggac aagacgttcg accccgaagg gtttatgctc ccgggtgttg cacggtggtg 2461 tgaccgaagt ggcggaatcg ccatcggtta cccccggttt tccctgtcgg tccgcccgcc 2521 taccaagacg agcagggtct acaaggtaac cgcgaagctc gtcctcccga cgcttgaggt 2581 gaccgcgcct tcgactgcta ccggtataca accggcgccg acgaaggcat acgattgcct 2641 ctgcgtcatg gagttcatgt tgcccgaaag gtcgaccgcg gtagagcgtg cagcattgct 2701 ctctcacgtt cggagcctcc tcgcgacgac ggttcaggcc tcagatgcgt ctccctcaga 2761 tgccacaggg agcccgctta ttgcggccgt aaccaacttc gaacctgcct attaatttag 2821 gtagatccgt tgttttgaac ttcaggagga tgccatgtct tctaagaagt atggctctaa 2881 cttccttaaa ggagttaggg agtaccgtgt tggcccagag gtaacctctg atgctatctc 2941 tcagtttctc gagtccctgg attgtcctcg tagcctggca gtactgattc tcttccgtaa 3001 tggagagcat cagcaattgc tagacctcga gttcgatccc tcttattacc ttactggtaa 3061 tgactgtcgg gatgcttacg ctgctacgaa gtttctatca aagtataagg atctttcctt 3121 agaccgagat ttagacgacg tagcgaagaa gaagttctta gaattcgaac ttctttgtaa 3181 gcagacgaat gctcgttttc ggaagttgga acatgaccag aaatttacta gtcatgtcgt 3241 atggctgcat aatgcagtcg tgcgtaaaat atccaatatc ctcggcgagt ttagtcctca 3301 agatttcttt gagatgccgg actggggtcc tggcgcgtca acgcttatta agcgacgatt 3361 cgccagttct accaacaagt tccagtgtga aactggaata acacgtgagt tacacgctct 3421 gataccgact gagctgctcc gcgaggttta ccctctttgg gcagcccatt tagctgatag 3481 taaatttcca gactatcagg tcgggaacag agttgtcact gtaccgaagg atgctaagac 3541 caatcgagtt attgctatag agcctggaat gaatctttgg ttccagaaat ctattggcga 3601 tatgattggt ctcaaactcc gacggtgtgg aaacgacttg cgctaccaat cgaggaacca 3661 agagcttgct cgctcgtcga gtatcactga cgaactggca actattgact tctcttctgc 3721 tagcgattcc atttcttatt ctgtcgttag ggagttactc ccgaagcgat ggtttgaagt 3781 gatggattct tgtcgttctc actttggctc cctggacggc aagctgttta ggtgggagaa 3841 gttctccagt atggggaacg gtttcacctt tcagcttgaa tcactcattt tctttgcagc 3901 ggcttattgc tgcgcggaat atataggctt agattataag tctatagaca agcgagtgag 3961 cgcctatggg gatgatgtta tcgtcccttc ggcctgtctg ggaatctttt ccgatttaat 4021 ggatttctac ggctttcgaa ttaacggaga taagagttat tacaactccc ctttccgtga 4081 aagctgcggg tcccattatt atcgggggtt agacttaaag cccgtctatc ttaaagatag 4141 attgtcctct cttcagacgg tttttcgtct cgcaaatgca ttccgccgat ttagtcacag 4201 attctaccag aacatcgggg atttctgtga tataaggcag cgtggtgtat ttgagcacct 4261 tgtgcataag gttccttcgg cttttcgcct taggattcct catcacattg gtgatggtgg 4321 attcatctcg aactttgatg aagccacccc gagtagggct agattcggta tcgaaggata 4381 cttcgtctat accctttctg aggtaagtaa aacttaccaa gaagacagag ttggatatct 4441 attgtccaat ctctgggcta tgcctaatct tgccgtccct atcaattggg gggcagaagg 4501 ccaaacccgg ctccaagcga ttgagcgcct cgttcaggta tctccgaaag atggacgtaa 4561 ctccgttcat ctggttgggg acctgaaatt gaggatctca aagagcctgg tacaacagtg 4621 gtgtaatctc ggcgagtgga tttagctttt agctaactct tcctcgtctt tcctctcatt 4681 tgagagtggg ggacgaccg //