LOCUS BK013999 3927 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.4_27 genomic sequence. ACCESSION BK013999 VERSION BK013999.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.4_27 ORGANISM ssRNA phage Gerhypos.4_27 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus telluricola. REFERENCE 1 (bases 1 to 3927) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3927) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN034736 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3927 /organism="ssRNA phage Gerhypos.4_27" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786328" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus Gerhypos.4_27" gene <1..1448 /gene="Gerhypos.4_27_1" CDS <1..1448 /gene="Gerhypos.4_27_1" /codon_start=3 /product="maturation protein" /protein_id="DAD52086.1" /translation="RGEATQCNPHIMCAHVYICIHYSKELSLFITRGKTRSRTLPGPT LHIEENIPIARLRNRFDYTCAGTQITESDGNRWPPPKGETMVDRGSEFYTQKKEFLGR KFPYSVIHVKDGLPPNLTNSGSTIQGSLVANIFPVDPTNVAWESAPLLPLSIQWPPDI SSPRNALVVKGAAAVAACSPGNPIAHVATALGEFLQDVPRIPGIALWESRLRALSTVA AGASEFLNVAFGISPTIADMHDFLKAVHTYDKAIDQFQRDAGRLVRRSFHFPKEESVT EEVLSGVLSPAGWVRNRSDPTQVDCFLGALNEGPALPVYETIRRRVTERKVWFDGAFT YHLPRGYDPLDDGDRRRLLAELFGAKPDLNTLWNLAPWSWAVDWFSSAGNNIKNLQNH INYGTVMRYGYLMEETSVTDTYRAGKMLAEPTYTGAVSRPYPAVASVTLRTTTKKRIQ ANPFGFGLSWEGLSSFQQAIAAALGITRVVK" gene 1486..1878 /gene="Gerhypos.4_27_2" CDS 1486..1878 /gene="Gerhypos.4_27_2" /codon_start=1 /product="coat protein" /protein_id="DAD52087.1" /translation="MFTDPLSLTPGTAFDAGAVSLPRVSQQGAVSVYQAGPLTVNAGS LLRVSASHQYGRRIRRVLRCDYSDNAGSTLISGTTAPRSMSAYVVFDVPNGGVFSATD QLALFNGLKGTWSATTDALMKKLLGGES" gene 1955..3754 /gene="Gerhypos.4_27_3" CDS 1955..3754 /gene="Gerhypos.4_27_3" /codon_start=1 /transl_except=(pos:1955..1957,aa:Met) /product="RNA-directed RNA polymerase" /protein_id="DAD52088.1" /translation="MKSLIVLWNSIAENLAVRCCTSAHRDIETVAVRSKSEGLSFLTI TLPNFAKDFEYSLEQGRVDDTVFLSFKKDRSLPAFLSGFSHLVFDRGTGVLLNEPDVG AIQAIRQLTLLFSKILLDCKPSRERKAFNEFVQCEYEVREGKSSRSYDDFKRVSSLLF ASFFTSIDKVVYDGDLRPKHGPGATADSLYGNQKFAQTSWPCRLERYFPYGECVLPNW SYVDQLDAVNFIEPGDEIPVKVISVPKTMKTPRIIAVEPTAMQYAQQAILREFQNALR SSYLSSFIGLDDQTPNQRMARQGSSKGDLATLDLSEASDRVPLEAVDALLSPHRHLHD AVMDCRSNRARLPSGDVLDLAKFASMGSALCFPMEAATFLVAIFLGIEKDLGHRLTKK DIKSYLGRVRVFGDDIIVPVDHVRSVISSLESFGLKVNYRKSFWNGKFRESCGKEYFD GTDVSVVRCRRLIPSSRKDAQEIISAVSLRNQLFHAGLEDAAFHLDRKMLRILKHYPV VGETSPVLGRHSYDTVSSDHKMVNSVLMVKGWRIRSVIPVNAIADWPALRKCLSSLEE RKSEVVPTSSDHLCRSGRPRVVGIKLGMGPAGY" ORIGIN 1 cgagggggga ggccacgcag tgcaacccgc acataatgtg cgcacatgta tacatatgta 61 tacattactc gaaggagcta tccttgttca tcacacgtgg aaagaccagg agtagaacgt 121 tacctggccc aactcttcat atcgaagaga acattccgat tgcgcgtttg cgtaatcggt 181 ttgattacac gtgtgctggg actcagatca ctgagtcgga tgggaaccgt tggcctcccc 241 ctaaagggga gaccatggtt gatcggggtt ctgagtttta cactcagaag aaggagtttc 301 tgggaagaaa gttcccgtac tccgtaatcc acgtgaaaga tggcttgccc ccaaatctta 361 cgaactctgg atcgactatc cagggttcct tggtggcaaa catttttcct gtggacccga 421 ccaatgtcgc ctgggagagc gctccgttac taccactgtc aatccaatgg ccaccagaca 481 tttcttcccc cagaaatgct ctggtcgtca aaggtgcggc agcagtagcg gcttgttctc 541 ccggcaaccc cattgcccat gtggcaactg ctcttgggga attcttgcag gacgttccca 601 gaatacccgg gatcgccctg tgggaatcgc ggttgagagc tttatcaacc gttgcagccg 661 gcgcgtcaga atttctcaat gtcgcgttcg gcatatcacc cactatcgcg gatatgcatg 721 actttctaaa agccgtgcat acctacgata aagcgatcga ccagtttcaa cgtgatgctg 781 gtcgtctcgt tagacgcagt ttccactttc ccaaggaaga gagcgtgact gaagaggttc 841 tctcaggagt actttctcct gcgggttggg tcaggaatcg ttctgaccct acgcaggttg 901 attgtttcct gggagccctc aatgaaggtc ccgctctccc agtgtacgag accatacgta 961 ggagagtcac cgaacgcaaa gtgtggttcg atggagcttt tacgtatcac cttccgagag 1021 gttacgaccc cctcgacgat ggtgacagac gtaggctcct ggctgagctc ttcggagcaa 1081 agccagactt gaatacgcta tggaacctcg caccctggag ctgggccgta gattggttca 1141 gttccgcagg taataacatt aaaaacctgc agaaccacat taactacggc acggttatgc 1201 gatatggtta tctcatggaa gaaacttccg tgacagatac ctatcgcgca ggtaaaatgt 1261 tggcagaacc aacatatacg ggcgctgttt cacgtccgta tcctgctgta gcctctgtta 1321 cacttcgtac aactacgaag aagaggatac aggctaaccc cttcgggttt ggccttagtt 1381 gggagggttt gtcttccttc caacaggcca tagctgctgc tctcggtata accagagtag 1441 tcaagtgaca ggtccactgc acaccaacgt acaaggagta cgccaatgtt cacagacccg 1501 ctttccctca cgccggggac ggctttcgac gctggtgcag tttctctacc ccgcgtttct 1561 cagcagggtg cagtttctgt ataccaggcc gggccgctca ccgtcaatgc gggatcgctc 1621 cttcgtgttt ctgcttccca ccaatacggg aggcggattc gaagggtcct tcgctgtgat 1681 tacagcgaca acgccggatc gacactcatt tcgggtacga ctgcgccgcg tagcatgtct 1741 gcttacgtgg tgtttgacgt tccgaatggt ggtgtctttt cggccacgga ccagctcgca 1801 ctcttcaacg gcctcaaagg cacgtggagt gcaacaacag acgccctgat gaagaagctc 1861 ttgggtggtg aaagctaacc caaggatctt ctaaggacgt tgctggtcag gatgtgactt 1921 tggcttagga cattttcctc tatcaggagg taatgtgaaa agcctaattg tactctggaa 1981 cagcatagcc gagaacttgg ctgtgcgatg ctgcactagc gcccaccgtg acattgaaac 2041 cgtcgcggtt cggtcgaaaa gcgaagggtt atcttttctt acgataacct tacccaactt 2101 tgcaaaagac tttgagtaca gtcttgagca aggtagggtt gatgacaccg tctttcttag 2161 tttcaagaaa gacaggagtc tcccggcatt tctgtcgggt ttctctcatc tcgtcttcga 2221 ccgtggcact ggtgtcctac ttaacgaacc cgatgtcggg gcgattcaag ctatccgaca 2281 gctaacgctg ttgtttagca agattctcct cgattgtaag ccttcgcgag agcgaaaggc 2341 ttttaacgag ttcgttcagt gtgaatatga agttagagag ggcaagtctt ctcgaagtta 2401 cgatgacttc aagagggtaa gctctcttct tttcgcatcg tttttcactt ccatagataa 2461 ggttgtctat gatggtgatc tacgaccgaa acatggacca ggagcgactg ctgactccct 2521 ctacgggaat cagaagttcg cacaaacatc ctggccatgc cgcttggaac gttacttccc 2581 gtacggggag tgcgtccttc ccaactggtc ctacgtggat cagttggacg cggttaactt 2641 cattgaaccc ggtgacgaga tacccgttaa ggttatctcg gtacctaaga cgatgaagac 2701 tccaagaata atcgcggtag agcctactgc catgcaatat gcgcagcagg cgatacttcg 2761 agaattccag aacgcactga gaagttccta tctcagttcg tttattggct tggatgacca 2821 gacgcctaac cagcgaatgg cacgccaagg atcgtcgaaa ggcgatctcg cgacactaga 2881 ccttagtgaa gcgtccgata gagtccccct cgaggctgtt gatgccctct tgtccccaca 2941 tcgtcatttg catgacgctg tgatggactg tcggtccaac agagctcgcc tacctagcgg 3001 agatgtttta gatctcgcta agtttgcgtc gatgggttca gccctttgct ttcccatgga 3061 ggcagccact ttccttgtgg ctatcttctt agggattgaa aaggacttag gacaccggtt 3121 gaccaagaag gacattaaat cctatcttgg tcgggtgcgt gtcttcgggg acgacatcat 3181 tgtccccgtt gatcatgtgc gttccgtgat tagttctctt gagtcctttg gacttaaggt 3241 caactaccgc aagtcttttt ggaatggtaa attccgggag agttgcggga aggagtattt 3301 tgacggaaca gacgtttcag ttgtccgttg ccgtcgtctt attccctcat cacggaagga 3361 cgcacaggag atcatttcgg ctgtctctct ccggaaccag ctctttcacg ctggtctgga 3421 ggacgcagct tttcaccttg accgtaaaat gcttagaata ctcaagcatt acccggttgt 3481 tggtgaaact tctcctgtgc ttggtcggca ttcttatgac actgtttcaa gtgatcataa 3541 gatggtaaac tccgtcctca tggttaaagg atggagaata cgatctgtta tcccagtcaa 3601 tgcgatagca gattggccgg ccttgcgcaa gtgcctttcc tctctcgagg aaaggaagtc 3661 agaggttgta cccacttcct ctgatcactt gtgccgttct ggacgccccc gagtcgtcgg 3721 catcaaactc gggatgggcc ctgcgggcta ctaacgcctg tgggttgtcg tggtgagaac 3781 cacacaaggg gagaccacct aggggatatc acctagtgat atcagctacg tttccagcag 3841 acacgtctac ttaagacggg cacgctggct tgcgtcgctt cccgggtaac tccgggaggt 3901 gcacttgggc agtgcacctc cccgccc //