LOCUS BK013998 3900 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.4_31 genomic sequence. ACCESSION BK013998 VERSION BK013998.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.4_31 ORGANISM ssRNA phage Gerhypos.4_31 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gihfavirus; Gihfavirus geohabitans. REFERENCE 1 (bases 1 to 3900) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3900) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN035279 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3900 /organism="ssRNA phage Gerhypos.4_31" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786333" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gihfavirus; Gihfavirus Gerhypos.4_31" gene 102..1490 /gene="Gerhypos.4_31_1" CDS 102..1490 /gene="Gerhypos.4_31_1" /codon_start=1 /product="maturation protein" /protein_id="DAD52082.1" /translation="MPFYEEWYQNDTTVNWAERLINNSLDSRGDGISNVDLVHLNTYR TRPAQGARLLQSVVMPSEKADPYTIFIDQNRAKRDAAIARGFNANLFTEDRGHPFELV RYKSEGTLWSGSFETFNGFYTDTFRGANLDLSLGGNPLFPTSFAPMEWSDLPAYAQTA YAKASPTPSMFSLSQFLGEVHEGLPRFGLQLLTRTQSLKAVGSDYLNVEFGWIPFISD LQSAGQALLGATTALLGPRGPLHRLRREAAFSDSRSASYGPSIVTPLTWVGTSSGTTE STFYPFEKGIVPKGPFGSLGNGNIRLIADKVTISELTESERWFEGSFSFIPKIGFNPD SYLDRLGQLMSTEITPSVLWELAPWSWLTDWFLKIGNTIAANEVASDNRIVSNYAYAM EQKTVTRGMLATGLHTNKYAGPANVVRRWTTTGKRRIRANPYGFKPMTTANLNTNQWL IMAALGLTNAGR" gene 1532..1891 /gene="Gerhypos.4_31_2" CDS 1532..1891 /gene="Gerhypos.4_31_2" /codon_start=1 /product="coat protein" /protein_id="DAD52083.1" /translation="MLTDPQAVTISGTASSLPKLEQRADTSVYSNVADGVDLFVTQKV AKDGRRRTTASLQKSVIVTDPITGLKSRIPYSISTGTSYPVGIAATDVVALYTALNTA LQASTNALLTKIINGER" gene 1891..1986 /gene="Gerhypos.4_31_3" CDS 1891..1986 /gene="Gerhypos.4_31_3" /codon_start=1 /product="hypothetical protein" /protein_id="DAD52084.1" /translation="MTEAVVVLLIVGITSLISISLAGFAMAARRS" gene 2041..3861 /gene="Gerhypos.4_31_4" CDS 2041..3861 /gene="Gerhypos.4_31_4" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD52085.1" /translation="MKSLLKLHLTVLADAGALCHVDTTLDAKYIESRYEHEGDTFLTI TLPTLAKDLERALADGVWPSTNSRFQKRTGLPVLFRGFLTRVFDDLGNIIEKPDANCI WAIRQICYLTHKVERPVSPERLHEALTTFLDTDDALDDHFRENEADMPWKEFQGMVSK VFGDVLDNLERDVANYDLIPSHGPGTVADRLSHPERWDFPYWPERLESVFPSWRYTRN IPEWSPVNIVAHHDELPVRVVAVPKTQSSPRIIAIEPSAMQYAQQALKASIYRGVKNS PTSRLIGFTDQERNRALAWSASETGQLATLDLSEASDRVHNDMVRNLLYRWPHLVDFV SATRSEWALVEGVEYPLTKFASMGSALTFPIETMIFATIALMGMKRAGITYGPEIWGH VVSVYGDDIIVPVEAVADVVKLLEVFGFRVNTSKSFWTGKFRESCGAEFYDGTDVSVV RLRMDPPGSRQDAAHIGKLSDFRNRCFLAGLWKTAGVCDELLAEFIRAKPVSAKLDTP VPSGTLHKLTFNPIRWDASFDPHLHRWTRKYSYVRPEQRPYEVDGHGGLLKWFYEASA SDDYFISDPWSDIHMGQERPRAFHINTRGIEVYPDLDGRL" ORIGIN 1 gctccctccc agaaggagag agctttgccg tggatcttcc atggcgcgtc cccggaactg 61 tgtatccggt ttgcgtttcc attactataa ggacaggact aatgcctttt tatgaggagt 121 ggtatcagaa cgataccact gtgaattggg ccgagcgttt gattaacaac tctctcgata 181 gtcgaggaga tgggatttca aacgttgacc tggttcacct taacacctac cgaactagac 241 ccgcacaagg tgctcgtctt cttcagtcgg ttgttatgcc ttcagaaaag gccgacccgt 301 atacgatctt tatcgatcaa aatcgggcca agcgagacgc tgcgattgct cgcggattta 361 acgctaacct ctttactgag gatcgcggac atccgtttga actcgtgcgt tataagtctg 421 agggtacttt gtggtcagga tcctttgaaa ctttcaatgg attctacacg gataccttcc 481 gaggtgctaa cctcgatctg tcattgggtg gtaacccgct attccctacg agctttgctc 541 ctatggaatg gtcggatctt cccgcctatg cgcagacggc ttacgcaaaa gcctctccaa 601 cacctagcat gtttagcctt tcccaattcc tcggtgaagt ccatgaaggg cttccccgat 661 ttgggttaca actgcttacc aggactcaat ccttgaaagc agttgggtca gactatctaa 721 atgttgaatt cggatggatt cctttcatct cggatttgca atctgccggt caagccctac 781 tcggggctac aaccgctttg cttggaccgc gaggtccttt gcatagattg cggagagaag 841 ctgcattttc cgattcccgc tctgcttcct atggtcccag tatcgtcacg ccccttactt 901 gggtcgggac ttcttctgga actacggagt cgacattcta cccctttgaa aagggtattg 961 tgccgaaggg gccctttggg tccctcggaa atggtaacat tcggcttatt gccgataaag 1021 ttaccatctc cgagcttacg gaatcagaac gctggtttga aggatctttt tccttcatcc 1081 ctaagatcgg gtttaatccc gattcttatt tggatcgtct cggtcaactc atgagtaccg 1141 agattactcc tagcgttcta tgggaacttg caccttggtc ctggctcact gattggttcc 1201 tgaaaatcgg gaacacgatt gccgctaatg aagtggcgtc cgataatcgg attgtgagca 1261 attatgcgta cgcgatggag cagaagaccg taacccgtgg catgcttgcc actggtcttc 1321 ataccaacaa atacgctggc cctgccaacg tcgtgagacg ttggactact accggcaaac 1381 gccgtatcag agccaatcct tatggtttta agcccatgac tacagccaat ctgaacacaa 1441 atcagtggtt gatcatggca gcgctcggcc taacaaatgc cgggcgttaa cctaatcaaa 1501 acccctgttt tatcaaacaa actggagcgt catgcttacc gatcctcagg ccgtcaccat 1561 ttctggtacg gccagttccc tgccaaaact cgagcagcgg gcggacacgt ccgtctactc 1621 gaatgttgct gatggagtcg atctctttgt gacccaaaag gtcgctaagg atggacgccg 1681 tcgcacaacc gcatctttgc agaagagcgt catcgtcacg gaccctatta cgggtcttaa 1741 gtcgaggatt ccctactcga tttccactgg tacttcttac ccagttggaa tcgctgctac 1801 tgatgtggtg gccctttaca cagcgcttaa cacggcgctg caggcctcaa ctaatgctct 1861 tcttacgaag atcatcaatg gggaacgttg atgactgaag ctgttgtcgt actgcttatt 1921 gtcggaatta cgagcctgat ttcgatcagt ctcgcaggtt tcgcaatggc agcacgtcgc 1981 agctaacagt tatcatgatc ggaaggcttg atggattcgc aaccccttga gaggggaaag 2041 atgaaaagcc ttttaaagct ccacctcacc gtactcgcag atgcgggtgc gttgtgccac 2101 gttgatacca cgctcgatgc taaatacatc gagagtcggt acgaacacga gggtgatacg 2161 tttctcacta tcaccttgcc aacacttgcc aaagatctcg aaagagcctt ggctgatggt 2221 gtttggccca gtacaaattc gcgttttcaa aagcgaacag gtctccccgt tttatttcgg 2281 ggtttcctta ctcgggtgtt cgacgacttg ggtaacatta tcgagaagcc agatgcgaac 2341 tgcatctggg caatacgtca aatttgctac ttgacgcata aggttgaacg tcctgtaagc 2401 cctgaaaggc tacatgaggc gcttacaacc tttctcgata ccgacgatgc cctcgatgac 2461 catttccgcg agaatgaagc ggacatgcct tggaaggagt tccaaggaat ggtctcgaag 2521 gtgtttgggg acgtgttgga taatctcgag agagatgttg ccaattacga cctcattcct 2581 tcacatggcc ctggtactgt ggctgatcgc ctcagtcacc cggagcgctg ggatttccct 2641 tactggcctg aaaggctaga atcggttttc cctagctggc gctacactcg gaatattcct 2701 gagtggtcgc ctgtgaacat cgtagcccat cacgacgagc tacccgtcag ggtagtcgcc 2761 gtaccgaaga cgcagtcttc acctcgaata atagctattg aaccgtctgc gatgcaatat 2821 gcgcagcagg ctctcaaagc ttctatatat aggggcgtta agaattcccc tacatcgagg 2881 ctgatcggtt ttaccgatca ggagcggaac cgtgctttag cgtggtccgc gtctgaaact 2941 ggtcagcttg ctacgcttga tttgagcgaa gcatctgatc gggtgcataa cgacatggta 3001 agaaacctcc tttatcggtg gcctcacctt gttgattttg tatccgcaac gcggtcggag 3061 tgggctttgg tcgaaggggt agaatacccc ttgactaagt tcgcttcgat gggttccgcg 3121 cttacctttc cgatcgagac tatgatcttt gcgaccatag ccttgatggg gatgaagcgt 3181 gcgggcatta cctatggccc cgaaatttgg ggccatgtcg ttagcgtcta cggagacgat 3241 ataatcgtcc ccgtagaggc agtggctgac gttgttaaat tactcgaagt cttcgggttt 3301 cgagtaaaca catccaagtc tttctggact ggtaagttca gagagtcttg tggagcggaa 3361 ttttatgatg gcacagatgt gtccgtcgtc cgtctccgga tggaccctcc cgggtcacgt 3421 caggatgcag cccatatcgg aaagctgtct gatttccgca accggtgttt tctcgccggt 3481 ttgtggaaaa cagcaggtgt ctgcgatgaa ctccttgcag agttcatccg agcaaagcct 3541 gtttcggcta aactcgacac cccagtgcct tcgggcaccc tccataagtt aaccttcaac 3601 cccattcgtt gggatgcgag tttcgacccg cacctccatc gctggacgcg aaagtattct 3661 tatgttcggc cagaacagcg accttacgag gtcgatggtc atggtgggct tttgaaatgg 3721 ttctatgaag cttctgcttc agatgactat ttcatctccg atccgtggag tgatatccac 3781 atgggtcaag aacgtcctcg tgcgtttcac ataaacacga ggggcatcga ggtctaccca 3841 gacctcgatg gtcgacttta aaggtcgact gcgggtatag gattaatatc ctatagctgg //