LOCUS BK013782 3860 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.4_33 genomic sequence. ACCESSION BK013782 VERSION BK013782.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.4_33 ORGANISM ssRNA phage Gerhypos.4_33 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Aphenovirus; Aphenovirus arvadaptatum. REFERENCE 1 (bases 1 to 3860) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3860) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN034087 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3860 /organism="ssRNA phage Gerhypos.4_33" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786335" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Aphenovirus; Aphenovirus Gerhypos.4_33" gene <1..1450 /gene="Gerhypos.4_33_1" CDS <1..1450 /gene="Gerhypos.4_33_1" /codon_start=2 /product="maturation protein" /protein_id="DAD51308.1" /translation="TFTKGDLSPHRHGKHCVPDHVSTYRKKTMPYYKEIYVREPRDCV YRNTYVPANSVSEQKAFTALKIDKVQTYRSRPSNKAVVVSEVTETAADPYGYFLTSAR DNKWKESAAARSIDLASMGPDTGHPFKSERFTRSEGFTWTEKSNSGNNRYLFQNAWIS PATSVYAGSTADVSAKELWGRAAPRPEIFDAGVFAGELREGLPRLVPELLKGKVNFFK STGSDYLNVQFGWIPFLNDLQNAARALAEATLWVHKPIGPIHRTRSKQVSIAPVNTTE SNMAYAPFWGTMPSYLSATELSAIRTAHGYTSSQAGGGVTTLYFSGDRVRLQTRKSWF EGNFFLLPKIGFDPSNYWSRLDALVSTKITPSTLWELSPWSWLIDWFSHVGDSLRLAE TLADDRIHAQYGYGMETYTCLDYFDGTMRSYNPANVTGGNFPSGRMMSELYVRKERVR ANPFGFIAGGGAALTESQSAILLALGLTKIGR" gene 1519..1881 /gene="Gerhypos.4_33_2" CDS 1519..1881 /gene="Gerhypos.4_33_2" /codon_start=1 /product="coat protein" /protein_id="DAD51309.1" /translation="MLADPQTVTINAVPVTLPKIDDRPTTNVYADLANGSTLYTTQRV TGKDNRRRSSASLQKEKIAADALTAINARINGSSTFSVAYPTGFTALEIEQQALALIA WLTASSNANLKKVIAGER" gene 1878..1973 /gene="Gerhypos.4_33_3" CDS 1878..1973 /gene="Gerhypos.4_33_3" /codon_start=1 /product="hypothetical protein" /protein_id="DAD51310.1" /translation="MSGLEAMVMIAIVVLISISLAAFGLVASKRG" gene 2012..3811 /gene="Gerhypos.4_33_4" CDS 2012..3811 /gene="Gerhypos.4_33_4" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51311.1" /translation="MKSLLNLHLAVLHDAALQCSVDVSKDVEYISRRYEDEGDSFLTI TLPKLAKALEKGLAAGFWPSQDLTNFKSIRGLPVLLRGFLTRIFAPDGVILSTPDPDS IWAVRQFCYLTHKVNRPTTPEREQAAFDQYWETDAELAGLEFSLQDPEHLDVYRMFSF LFSDMLSKIEIKIDSLELVPKHGPGSTADRLRPSEKWDFEYWTERMESVFPSWFYRSN LASDPHACLQPIETEIPVKVISVPKTMSTPRIIAMEPASVQYAQQALKREFQQLVEHS ELRELMGFVDQTRNQKMAREGSLTGLLATLDLSEASDRLSWSLVQFLFRPWPSVLEYL DVTRSRAANVGGVVRHINKFASMGSALTFPVETMVFLAIAASVQKGKSGRRYPSASQL AGRVSVYGDDIILPAHTADLAVARLGNFGFKVNSSKSFWTGLFRESCGAEWFNGTDVS VIRLRADLPRSRDDALLVSKATEFRNRCYNGGLWSVVRFMDPYLDMVRIPSYPSWMTT ARPHSGLVKDTFLPVPYRRVKYHEDYQELQVRVPHLKSIALSYEVDGDAGLLKWFHEN EFLNKDLSSPHDEEERPHAFSIIMRGISWLPSH" ORIGIN 1 cacctttaca aagggtgacc tctctccaca tcgacatgga aagcactgtg tacctgacca 61 tgtgtccact taccgaaaga agaccatgcc atactacaag gaaatctatg ttcgtgagcc 121 tcgcgactgc gtttaccgga acacttacgt tccggcgaac tcagtcagtg agcagaaagc 181 ctttacggct ctgaagatcg ataaggttca aacttatcgg tctcgcccct cgaacaaggc 241 tgttgttgtc tccgaagtta cagagacagc agctgaccct tacgggtatt tcctgaccag 301 cgcacgcgat aacaaatgga aggaatccgc tgccgcgcgt tccatagatc ttgcatctat 361 gggacccgac accggtcatc ctttcaagag tgagcgtttt acgcgtagtg agggcttcac 421 gtggactgag aagtcgaata gcggcaacaa ccgttatctc ttccagaacg cgtggatttc 481 ccccgctacg agcgtgtacg ctgggtctac cgcagatgtc tccgcaaagg agctctgggg 541 tagagcggca cctcgtcccg agatatttga tgcaggggta ttcgcagggg aactccgtga 601 aggacttccc agactcgtgc ctgaactgct caagggcaaa gtgaacttct tcaagtccac 661 tggctccgat tatctcaatg tgcaattcgg atggattcca ttcctaaacg atttgcagaa 721 tgcggccagg gcgttggcgg aagccacgct ttgggttcac aaacccattg gtcccattca 781 tcggacgagg tcgaaacagg tctcgattgc accggtcaac acaaccgaaa gtaacatggc 841 atatgctcct ttttggggaa ctatgcctag ttatctctca gctacggagc tgagcgcaat 901 caggactgca cacggttaca ccagctctca agctggtggg ggtgtcacca ccctctactt 961 tagtggtgat cgtgtgcgcc tccagactcg gaaatcttgg tttgaaggga acttcttcct 1021 tctacccaag atcgggtttg accctagtaa ctactggtcg cgtcttgacg ctctggtaag 1081 tactaagatc acaccttcca ctctctggga gctgtctcct tggtcttggc tcatcgactg 1141 gttctcccat gtgggggact cgctacgtct cgcagagacg ttagccgatg accggattca 1201 cgcacagtac ggttacggaa tggagacata cacatgtctc gattactttg acggtactat 1261 gagatcctac aaccctgcta acgtcacggg cggaaacttt ccttcgggaa ggatgatgtc 1321 cgagttgtac gttcgcaagg agagggtccg tgcaaatcct ttcggtttca tagcaggtgg 1381 tggggcggct cttacagaga gccaaagcgc catcttgctt gcgctcggtc tcacaaagat 1441 cggtcgctaa acacagctgt acccttcagc ttacaaaagg gaacaaccac atccaacaaa 1501 caacccggag ggcctattat gctcgctgac ccacagacag tcaccattaa cgcggttcct 1561 gtcacgctgc ccaagatcga cgatcgtcct acgacgaacg tctacgctga tctcgccaac 1621 ggttcgaccc tgtacaccac ccagagggtg acgggcaagg acaaccgacg acggtcttct 1681 gcttctcttc agaaggagaa gatcgctgct gatgccctca cggccatcaa cgcacggatc 1741 aacggctcct cgactttctc ggtcgcttac cccacggggt tcacggctct cgaaatcgag 1801 cagcaggcac ttgcactcat cgcatggctt accgccagct cgaacgctaa cctgaagaag 1861 gttattgcgg gcgaacgatg agtggtttgg aagccatggt catgatcgcg attgtggtgc 1921 ttatcagcat ctcactcgcg gcctttggcc tggttgcatc caaacggggt tagagctagt 1981 aggctggatg acctaccctt gattggggat catgaaaagc ctattaaacc tccacctagc 2041 agtgttgcat gacgcagcac tacaatgctc tgtcgatgtg tcgaaagatg ttgaatacat 2101 ctctcgtcgc tatgaagatg agggtgactc gtttctgacg atcacccttc caaaacttgc 2161 gaaggccctt gagaaaggcc ttgctgcagg attttggccg agtcaagatt tgactaattt 2221 caagtcaatc cgagggctcc ccgtacttct taggggtttc ctcactcgta tcttcgcacc 2281 tgatggggtt atactcagta ctcccgaccc agattcaatc tgggcggtgc gtcagttttg 2341 ttatctgacg cataaggtca atcgtcctac tactcccgaa agagagcagg cagcgtttga 2401 ccagtactgg gagactgatg cagaactggc gggtcttgag ttttctctcc aagacccaga 2461 acatcttgat gtttatagga tgttctcgtt cctgttctcg gacatgctct cgaaaatcga 2521 gataaaaatc gattctctgg agcttgttcc gaagcatggc ccaggttcca ccgctgatag 2581 gcttcggccg tcagaaaagt gggactttga gtattggact gagcggatgg aatccgtctt 2641 tccttcgtgg ttctaccgga gcaatctagc ttcggatccc cacgcatgct tgcagcctat 2701 cgaaaccgag atacctgtca aagttatctc tgtgccgaag acgatgtcta caccaagaat 2761 catcgcaatg gaacctgcta gcgtacagta cgctcagcag gctctcaagc gagagtttca 2821 acagcttgtt gaacactccg aactccgtga actcatgggg ttcgtggatc agacccggaa 2881 tcagaagatg gcccgtgagg gctctctgac tggtctcctt gccacactgg atctcagtga 2941 agcgtctgat cgtctttctt ggtcacttgt ccagttcctt ttcaggccct ggccgagtgt 3001 cctcgaatac ttggatgtaa cgcgttctcg tgccgcaaat gttggaggtg tggttcgcca 3061 catcaacaaa tttgcttcga tgggttcggc tttgactttc cctgttgaga ctatggtgtt 3121 tcttgccata gccgcctcag ttcagaaagg caaatccggt cgtcgttacc cctctgctag 3181 ccagctggct ggcagggtga gtgtgtatgg ggatgatatc attctccccg cacacacggc 3241 agatctcgca gtcgcgcgac tcggaaactt cggtttcaaa gtcaattcct ctaagtcctt 3301 ttggacgggt ctctttcgag agtcctgtgg ggcagagtgg ttcaacggca ctgacgtgtc 3361 agttatccgc ttgcgcgctg accttcccag gtcgcgagat gatgcactcc tcgtgagtaa 3421 ggcaacagaa ttccggaacc gttgttacaa tggcgggctc tggtctgttg tgcgctttat 3481 ggatccgtac ctggatatgg tacgtatccc gtcgtatcct tcatggatga cgacagcgcg 3541 gcctcactca ggtcttgtca aagacacttt ccttcccgtt ccttatcgac gtgtgaaata 3601 ccacgaagat tatcaggaac ttcaggttcg tgtccctcac ctcaaatcca ttgcgttaag 3661 ctatgaagtt gatggtgatg caggacttct gaagtggttt catgagaatg agttcctgaa 3721 taaggactta tcctcgcctc acgacgaaga agagcgtcct catgcgttca gcattatcat 3781 gaggggcatt agttggctgc caagccacta atgagtccgt aaggacttgc gggcggatgt 3841 ctcacgacat tcgtttgagg //