LOCUS BK013908 3752 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.4_37 genomic sequence. ACCESSION BK013908 VERSION BK013908.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.4_37 ORGANISM ssRNA phage Gerhypos.4_37 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Cunarovirus; Cunarovirus pedocola. REFERENCE 1 (bases 1 to 3752) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3752) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN032938 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3752 /organism="ssRNA phage Gerhypos.4_37" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786339" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Cunarovirus; Cunarovirus Gerhypos.4_37" gene 17..1351 /gene="Gerhypos.4_37_1" CDS 17..1351 /gene="Gerhypos.4_37_1" /codon_start=1 /product="maturation protein" /protein_id="DAD51747.1" /translation="MSVPKVQLVANNQDAFPLGNLSGFHTFAQSYARSALLASEPHHK LPNGSWSGGGPFFVVKDSSIHTGHGILSVTYDGYGELGPYGYGTVGGGGGSHYLSCPQ GIVGAPWDSSTYESAVRDVTTYAATGYKRTRPGNPVASLGQFLIELRDLPSLPFKKAF TKGRKLGTLKYHRYPIQEVPGRLLNRLTDFRGLGSEYLNVVFGWRPFVSDLRKMYYLW QDIDKRIAQLVRENGKSINRRATLEQDVSTVEGDPDSYPLPYVWVTGGPSGVFPFIPG HSTWQGQRRTTTKVWYAANYRYYVPDIGSSQWDRRARLALFGALPTPELLWEVLPWSW LIDWFSNVGDVISNMSSNAVDNLVQNYAYTMKHVKSETILTSDSVHEASDPHSAAHWR RNEVHATSTYTVETKLRDGTGNPFGLNVKLASLSTYQLSILAALGISRSKVR" gene 1401..1757 /gene="Gerhypos.4_37_2" CDS 1401..1757 /gene="Gerhypos.4_37_2" /codon_start=1 /product="coat protein" /protein_id="DAD51748.1" /translation="MFADPQSVTYATVAKSLPAIGRTDSQSEYRLDDSGTVYDLTISH QFKTRNRVVARLRRDATVANPLNPTTNIVASATATFTMDFPSSGLTTTDAQNLGNALV AWLTSGNILKMANGET" gene 1861..>3752 /gene="Gerhypos.4_37_3" CDS 1861..>3752 /gene="Gerhypos.4_37_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51749.1" /translation="MKSLVELLELLVHDCARMSGAPLSRDVVTLRDRVKHEGDSFITI TLPAFCQDFEKSLDLGHVAPGAWPSFGKTCSGIPEFLQGLLRHVFDKDGKLLAEPSTL CIRLVRQICLFGKKLLRPCSEERLEAAVEKYCQCEDDVREHLGGDTLLGVFEEVAAVI MTSMPRLRDGIFIDHVIPKHGPGRTEERISGNQKWAFRTWNRRLEDVGYSYLTYGRAQ ACRAMRIADRRPLYPNEEGELVDIGDELPEVVEPEDEAPVRVVFVPKTLKSPRVIAVE PVCMQYAQQGLRRLLEGQVETCPLTAGHVNFRDQTVNQELAKLASERGHMATLDMSDA SDRVSVAHVKMLLDTVPQFKEWVMACRSMSAKLPSGEVIRLEKFASMGSALCFPIESL VFFTSIIASMHWRAGMRPTRQSVHALGRLVYVFGDDLIVPHDEAPAICDDLEALGFKV NRRKSFWTGKFRESCGSDCYDSADVTPVYVRRDLPTDRADVSGILSSVSTCNQLYSAG YWKTASAIRKAVEAIVGRLPQLSEESAMALQRHVDAYPKVAPGDGPAIGWNHHSEVVS PRRWNDALQTVEKRVWVVVPSRAADSIDGDAALAKCFRVIGSQEHIDLDHLDMSVRSY GLTLKR" ORIGIN 1 cgatgggagc caattgatga gcgtaccgaa agtgcagctt gtggcaaata accaagatgc 61 gttccccttg gggaacttgt ctggtttcca cacttttgca cagtcgtacg ctcgttctgc 121 gctccttgct tccgagccac atcacaagct ccctaatgga tcttggagtg gcggaggtcc 181 gttcttcgtt gtgaaggatt catccattca cacgggacac gggatcctca gcgttaccta 241 cgatggctac ggcgagctcg gaccttatgg gtacgggacc gtcgggggcg ggggaggtag 301 tcattacctc tcctgtccac agggcatcgt tggtgcacca tgggattcga gcacctatga 361 atctgctgtt cgcgacgtta caacgtacgc ggcaacaggt tacaaaagga ctcggcccgg 421 caacccggtg gctagtctcg gtcagttctt aattgaactg cgagatttgc caagccttcc 481 gtttaagaag gctttcacaa agggtaggaa gcttggtact ttgaagtacc accgctatcc 541 tatccaagaa gtgcctggtc gcctcctgaa tcgactgaca gattttcggg gcttaggctc 601 cgagtatctg aatgtcgttt tcggatggag gccctttgtc tctgacctgc gcaagatgta 661 ttacttgtgg caggacattg acaagcggat tgctcaactc gttcgtgaga acgggaagag 721 tattaaccgc agggcaacgt tggagcaaga cgtttccact gttgaagggg atccggattc 781 gtatccgctt ccctatgtct gggttacggg tggaccctca ggggtctttc cgtttattcc 841 cgggcattca acgtggcaag gtcagcgcag gacgacaacg aaagtctggt acgcggcgaa 901 ttatcgctat tacgtacctg acatcgggtc gtcgcaatgg gaccgaaggg ctcgactcgc 961 gctgtttggg gcgttgccaa cccctgaact tctgtgggaa gtccttcctt ggtcatggct 1021 aattgactgg ttcagcaatg ttggagatgt tatctctaac atgagctcga atgcagtcga 1081 caatctcgtt cagaactacg cgtacactat gaagcacgtc aaatcggaaa cgattttgac 1141 gagtgatagt gtgcacgaag cttctgaccc ccattctgcc gctcattggc gacggaatga 1201 agttcacgcg acctcaactt acacagttga gactaaactg cgtgacggga ctggtaaccc 1261 attcggattg aatgttaagt tggcgtcgct atcgacttac caactcagca ttctcgctgc 1321 tcttggcatt agccggagca aggtgcggta ggtctaaacc tactggcact ttacaaacac 1381 ctccttgagg acaactcgac atgtttgccg atcctcagtc agtgacttac gccactgttg 1441 cgaaaagtct gcctgccatt ggcaggacag actcccagtc cgagtatagg ctggatgact 1501 ctggtacggt ctatgacctt accatcagtc accagttcaa gactcgaaac cgggtggtcg 1561 cccgtcttcg gagggatgcc actgtggcga atccgttgaa cccgacgact aatatcgtcg 1621 cgagcgcaac ggctacgttc acaatggatt tcccttcctc gggtcttacc acgactgatg 1681 cccagaacct tggcaacgcc ttggtcgcct ggctcacgag cggtaacatc ctgaagatgg 1741 caaacggtga gacgtgactt gtagtcacgt cgtccagcgc gagctggagc tacactggct 1801 ttgggcacgt gcctaggcgg caagcgtcct ggatctttac cccgtttaaa cggaggaaag 1861 atgaaaagcc ttgtagagct cctcgaactt ctcgtacatg attgtgcgag aatgagcggc 1921 gcccccctgt cgcgcgacgt ggttacgttg cgtgacagag tcaaacacga gggtgatagt 1981 ttcataacta tcactctacc tgccttttgt caagactttg aaaagagtct tgaccttggg 2041 cacgtggctc ctggagcgtg gccttccttc gggaagactt gctctggaat tcctgaattt 2101 cttcagggac tcctgcgcca tgtgtttgac aaggacggga aattgttggc ggaaccctcg 2161 accctttgca ttcgactcgt gagacaaatt tgtctcttcg ggaagaagct gcttcgtcca 2221 tgctctgagg agcgtctcga ggcagcggtc gagaagtact gtcaatgcga agacgatgtt 2281 cgggagcatc ttgggggaga cacccttctt ggtgtttttg aggaagtggc agctgtcatc 2341 atgacaagca tgccgcgact tcgtgacggg atcttcatcg atcacgtcat ccctaagcat 2401 gggcccggtc gtacggaaga gcgcatttct ggaaatcaga agtgggcttt tcgtacgtgg 2461 aatcgtcgcc ttgaagatgt cggctactcg tacttgacgt acggtagagc ccaggcttgt 2521 cgtgcgatgc gaatcgccga ccgccgtccg ctttacccta acgaagaggg cgagttggtt 2581 gacattggtg acgaacttcc agaagtcgtc gagcctgagg acgaagcacc cgtgagggtt 2641 gtcttcgttc caaagaccct gaagagcccg agagtgattg ctgtagagcc tgtgtgtatg 2701 caatacgcac agcaaggtct acggcgattg cttgaggggc aggtggagac ttgccccctc 2761 actgctggtc acgtgaattt tcgtgatcag acagtgaatc aagagttggc taagttggca 2821 tcagagcgag gccatatggc gacgctcgac atgtcagacg ccagcgatcg ggtctcggtg 2881 gctcatgtta agatgctact tgataccgtt cctcaattta aggaatgggt catggcgtgt 2941 cgaagcatga gtgcgaaact tccttcaggc gaagtgattc gcttggagaa gttcgcgtca 3001 atgggctcag cgctctgctt tcccattgag tcgctggtgt tctttacgag catcatcgcc 3061 tcaatgcatt ggagagcagg aatgcgtccg accaggcaat cggtccacgc actgggccgg 3121 ttagtctacg tctttgggga cgatttaatc gtaccccacg acgaggcgcc tgcgatttgc 3181 gatgacttag aagccttagg cttcaaggtc aaccggcgca agtctttctg gactgggaag 3241 ttcagagagt cttgtggctc ggattgttac gacagtgcgg acgtgacacc tgtctacgtc 3301 cgtcgtgacc ttccgacaga tcgcgcagat gtgtctggga tcttgtcttc ggtgtcaacc 3361 tgcaatcagc tttactcggc tggttactgg aagacagcat ccgccatcag gaaggcggta 3421 gaggcaattg tcgggcgact tcctcagctt tctgaagagt cagcaatggc gcttcagcga 3481 catgtggatg cgtatccgaa ggttgcccct ggagacggac ccgctattgg gtggaatcac 3541 cacagcgaag tggtttctcc caggcgctgg aacgacgcac tccaaaccgt tgaaaaacgt 3601 gtttgggttg ttgttccttc gcgggcagct gactccattg atggagacgc cgccttggcg 3661 aagtgtttca gagtcattgg ctctcaagag cacattgacc tggaccattt ggacatgtcc 3721 gttaggtcct acggccttac tctaaaacgt ag //