LOCUS BK014025 3802 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.4_38 genomic sequence. ACCESSION BK014025 VERSION BK014025.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.4_38 ORGANISM ssRNA phage Gerhypos.4_38 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Alehxovirus; Alehxovirus agradaptatum. REFERENCE 1 (bases 1 to 3802) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3802) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN032996 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3802 /organism="ssRNA phage Gerhypos.4_38" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786340" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Alehxovirus; Alehxovirus Gerhypos.4_38" gene 93..1274 /gene="Gerhypos.4_38_1" CDS 93..1274 /gene="Gerhypos.4_38_1" /codon_start=1 /product="maturation protein" /protein_id="DAD52175.1" /translation="MQPFPMTNGSAVRTGLTAATFTRTVQQSQDYPYYRSLCVDEVNK RTTDNPLTINFEGRQIRNLNGFINNLNGTTWTATDYFPPGLLIAPGHQLTSNLIPSIG EVALGTIASSNPSKPSISIPNFVYEIKDLPEMIRDIGRLKLLPKRIRHIRFQQLGGKA SKKEVANHFLSYQMGWAPLIEDLQKILGFQALVDKKMRELQNLYHNGGLQRRVRKSQW KASVEQVPSNIYLDSAFISLSLSVTQTRTTRVERWGTVRWTPSKLPDPRFSSKDLARL ARDLTFGMKGISGKQAWDAIPWTWLIGWFTNFGDFLQANQNSIPLVHSAPCVMTKTET TYRWVRTDGLQASFTGGDGAMFFSTKSRTISSGSVTAHLPFLGAKHFAILAALAIQRK R" gene 1307..1681 /gene="Gerhypos.4_38_2" CDS 1307..1681 /gene="Gerhypos.4_38_2" /codon_start=1 /product="coat protein" /protein_id="DAD52176.1" /translation="MLGSTLTVTLDGSGGTAKVLPLINQDGYSSEYFLDETLVTYRAK VRHSKDNVKAGTQAFDRHTVTFSRYLKPAGAVAGRLTEVIYTIRTDPVEVQSDVIDLS EALSFYMVKAGGIAGKLLGWES" gene 1772..3769 /gene="Gerhypos.4_38_3" CDS 1772..3769 /gene="Gerhypos.4_38_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD52177.1" /translation="MKSYVSYLQGIYSSLLSTVVEHYPHLRSDCDRDLSRLLSLIDTR GHSFLMIDLPAIGKHFDLCLSMGHLTPSYLPGNRPYKKGRAIPRLFKGMLLRVFDENG VLRADSDVACIRFLRQLYYAAKKVKITCDDSRTWKQVHEFFETDREVESPSLNWDEDR LRLDGLRDLHFGDRRNPGPAPLLFPDLDDRASVEESISISSGFAECVQQVADIVSASL GRFDPFEWRSKHGPGAVADQRHTDFKYDFPSWPAKLSEVFPLADFGFANFGTWSASVR SGDIHKRFSLNEYPSRLIAVPKTLKAPRLIASEPVSHQWCQQTIKDYLTSRLRDTPIR STIHFRDQTENQEFARRASHTQSHVTVDLSEASDRLSCWVVERCFRRLPSLVAAFHAS RTRWVVNTIDRKSPNYYKLRKFACMGSACTFPVQSYVFAIASIAAVLYSRGLRPSIKS VRRVSQEVRVFGDDMIVPTDGWDRLQEVLRHLRLKINHSKTFYTGKFRESCGLDAWDG QDVTPVYTMTHPEVSRPESIASSVATHNNYVLRGYFETAGFLQSRLSKLRHITLARVP IGSGVFGLYDYEFRGNPGVKRRYNPDTHVVEYRVHTLTALTGRDEVKDDSVLLQYFTE AQVPPRRSGERLGKARRPSLNLRRRWVNLEDRRGESQYLSS" ORIGIN 1 cctcataatg aggggctctc gagcgtgagc ttgacacatc ccgtgtcctc aatctcagaa 61 cctgtgcaaa gatgtcgcga acaagaagtc gcatgcagcc ttttccaatg actaacggct 121 ctgccgttag gactggtttg actgcagcta cctttacaag gactgtccag caatcgcagg 181 actatcccta ctataggtcg ctttgcgttg atgaagtcaa taagcgtacg actgataacc 241 ctcttactat caactttgag ggccgtcaga tcagaaactt gaatggtttc atcaataatc 301 tcaacggtac aacttggacc gccacagatt acttcccgcc tgggctctta attgctcccg 361 ggcatcagct gacatctaac cttatcccat ccattggtga ggttgctctt gggacgatag 421 ctagttctaa tcctagcaaa ccgtctataa gcattccaaa ctttgtgtat gagattaagg 481 acctcccaga aatgatccgc gatattgggc ggctcaagct ccttcctaag agaataaggc 541 atattcgttt ccaacaactt ggtggcaaag ccagcaagaa ggaggttgcg aatcactttc 601 tctcttatca gatgggctgg gctcctctta tcgaagatct tcaaaagata ttaggtttcc 661 aagccctcgt cgataaaaag atgagggaac tccaaaacct atatcataat ggaggcttgc 721 aacgccgtgt aaggaaatct cagtggaaag cttcggtgga acaagttcca tcgaatatct 781 atctcgactc ggcctttata tctctgtcac tttctgtgac tcagacgagg acgactagag 841 tagaaagatg gggtacagtt cgctggaccc cttctaagct cccagatccg agattttcct 901 ccaaagattt ggcccgctta gcccgagatc tcaccttcgg tatgaagggt atctctggaa 961 aacaagcctg ggatgctatt ccctggactt ggctaatcgg gtggtttact aattttggtg 1021 actttttaca agccaaccag aatagtattc cgttggttca ttctgcgcca tgtgtaatga 1081 cgaagactga aaccacctat cgttgggtcc gtactgatgg cctacaggcc agctttacgg 1141 gcggagacgg cgcgatgttc ttctcgacta agtcgagaac gatttcatcg ggttctgtta 1201 cggcgcatct cccctttcta ggggcgaagc atttcgcgat ccttgcggcc cttgccattc 1261 agcgcaagcg ctgaatggaa agtgtgcatc aaggagaaga aagactatgc taggctcaac 1321 cctgacggtg actcttgacg gttccggtgg aactgccaag gtgttgccgc tgattaacca 1381 ggatgggtac tcgtccgagt attttctgga cgaaaccctc gttacttacc gcgcgaaggt 1441 gcggcatagt aaggacaacg tcaaagctgg cactcaggcg tttgatcgtc acactgtgac 1501 tttctctcgt tatctgaagc cggccggcgc tgtcgctggt cgcctgactg aggttatcta 1561 cacgatccgt acggatcctg tggaagttca gtccgacgtc atcgacctgt ccgaggcgct 1621 cagcttttac atggtaaaag ctggaggcat cgcgggcaag ttgctcggtt gggagtcgta 1681 aggcgtctct gacgccctaa ggcttccaac gcgaggaaga tgggtgagcg tagccgtaga 1741 ttgtagatac ccctaatcga aggagcacta catgaaaagc tacgtgtctt atcttcaggg 1801 aatatactcg tcactgttgt caacagtggt cgagcactat ccccatctcc gtagcgattg 1861 tgatcgggat ttatctcgct tgctctcgct catcgacacg aggggccatt catttctcat 1921 gattgacctc ccagccattg gaaagcattt tgatctatgc ctctcaatgg gacacctaac 1981 tccctcttat ctgcctggaa acaggccgta taagaagggg agagcaatcc ctcgactatt 2041 caaggggatg cttcttcgtg tcttcgatga aaatggagtg cttagggctg attcggacgt 2101 tgcgtgtatt cgtttccttc ggcagctgta ttatgcagcc aagaaggtta agataacatg 2161 cgacgactca agaacatgga aacaagttca tgagttcttc gaaacagacc gagaagttga 2221 gtctccttcc cttaactggg atgaagaccg actcaggctt gacggtctac gggatctcca 2281 ttttggcgat cgtcgtaatc ctgggcctgc tcctctgctc tttcctgatc ttgacgatcg 2341 ggccagtgtg gaggagtcca tctccatatc ttcaggattc gctgaatgcg tccaacaggt 2401 cgcagacatc gtctccgcaa gtctcggaag gttcgaccct ttcgaatgga gatctaagca 2461 cggacccggt gctgtagctg atcagcgtca taccgatttt aagtatgact ttcctagctg 2521 gccagcaaag ctatcggaag tgtttccact tgctgatttt ggctttgcca actttggcac 2581 ttggtccgct tctgtacgaa gtggtgatat tcataagaga ttttctctca atgaatatcc 2641 gtctagattg attgctgtcc caaagacact aaaggctcct cggctgatcg cctcggaacc 2701 tgttagtcat caatggtgtc aacaaactat caaagactac ctcacttcgc gcctacgtga 2761 tacccctatt cgcagtacga ttcactttcg tgatcaaact gagaatcagg aattcgccag 2821 gcgggcttcc catactcaga gccacgtgac agttgatctg tccgaggcct ctgatcgtct 2881 gagttgttgg gtcgttgaac gttgcttccg gagacttccg tctcttgtcg ccgcgttcca 2941 cgcctctcga accagatggg tggttaacac catcgatcgc aagtctccga actattataa 3001 gttacggaaa tttgcttgta tgggttcagc ttgtaccttt cctgttcaat cctacgtctt 3061 cgccattgct tcgattgctg cggtcctcta ttctagagga cttaggcctt cgatcaagtc 3121 ggtccgtagg gtctcacagg aggtccgcgt ctttggtgac gatatgatcg ttcccactga 3181 cggttgggat aggctgcagg aggtgctgcg tcatcttcgt ttgaagatta accactcgaa 3241 gaccttctat actggaaagt ttagagagtc ttgtggtctg gatgcatggg atggacaaga 3301 tgtcactccc gtgtatacca tgacgcatcc tgaagtttcc cgacctgagt caatagcaag 3361 ctctgtggcg actcataata actacgtatt acgtggctat tttgagaccg ctggtttctt 3421 gcaatcgcga ctgtccaagt taaggcatat taccttagct cgggtgccga ttggctcagg 3481 ggtcttcggc ctctatgact acgagttcag agggaatccc ggcgttaaac gccgttataa 3541 ccctgataca cacgtagtcg aatatcgtgt ccatacgctt actgcgttaa ctgggcgcga 3601 cgaggtcaaa gacgactccg tgctgcttca atatttcact gaagctcaag tccctccacg 3661 tcgaagtgga gagcgtcttg gtaaggcacg aagaccgtcc ctcaatctaa ggagacggtg 3721 ggtgaatcta gaagatcggc gtggcgaaag ccaatacctt tcatcttgat ttaagggttg 3781 ggtatttccc ttctctttgt gg //