LOCUS BK013873 3798 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.4_39 genomic sequence. ACCESSION BK013873 VERSION BK013873.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.4_39 ORGANISM ssRNA phage Gerhypos.4_39 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Fagihovirus; Fagihovirus chthonovivens. REFERENCE 1 (bases 1 to 3798) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3798) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN036035 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3798 /organism="ssRNA phage Gerhypos.4_39" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786341" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Fagihovirus; Fagihovirus Gerhypos.4_39" gene 100..1233 /gene="Gerhypos.4_39_1" CDS 100..1233 /gene="Gerhypos.4_39_1" /codon_start=1 /product="maturation protein" /protein_id="DAD51623.1" /translation="MEPRHRSNHSLVAGGSVWANGVKQYDETYIEVEDDMDDFTGKHR RKKPIRLLPDSNCDIYRNTRVPPTYTDTGGYFELKQVRPYKDQYARVDEYPWRGSGTR ESENAYFINVLLAKTHPFRSEYSVPTSMVELLDLPSMASIVAKSFSGLVGSSYLSYRF GFPQFVQDIKTLSGITKALESRVKEYSSLNRHGGLRRNVKLGENVYRDSGRQTIWSTW GHFVTAEVTSIRKYIVRGSVRWRWKDGADISLSKLEAFNEAVKAIFDIGELDSTTLWN SVPWTWLADYFVDVSSWLQANENHSWVEPYDISIIRRFKSRTEIDNLEYDVGFGIKGH ITGSIYSRDSNLNSTLFPAARYSFLTTTQYLTMLALLGKFRGG" gene 1271..1627 /gene="Gerhypos.4_39_2" CDS 1271..1627 /gene="Gerhypos.4_39_2" /codon_start=1 /product="coat protein" /protein_id="DAD51624.1" /translation="MTISSPITITVNAVAKVLPRINQDNFGSTYRLKEANDEWELNIR HTYEGKAGPAQIERHNADFKHTNFVGTDRIPVVTQTYFVMRNPRNQSGVDSAQITSGL LTWGSSAASDLSAGQN" gene 1711..3792 /gene="Gerhypos.4_39_3" CDS 1711..3792 /gene="Gerhypos.4_39_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51625.1" /translation="METTPKSLVSSLCGYVRAVFSDCAYLYARPSDCERDSSRLCHEL GAKGARLLLLDLPAAAKHFDKCLDQGEYVPSNLPLTGLVSKAVRVPAFMRGLYLLVFE SDGKLRSTPCPNAILAIRTLLKGVNKLNLPFTDRSLCHELKEFEAIERTLRSPHLNWC GDRLSDVDPGLFPGGISDRRVSETTSFGGGLGALVRRLHLADALPRETSQYGLVLGDR ALPCNVDLALINTVQLVADIVSSSFGDLHVEDPSELPKHGPGVVADVKKGESKFDFPY WTPKTDAIFPYDWYGTHTLGCRTFIRSALNWVSHEAPSKIVAVPKTAKGPRLIAAEPV HHQWLQQLIMNQLVRRLEQTPIAGAVRFDDQSRNQSFARKGSIDGSYATIDLSSASDR VTCWMVERFCRANLSLLERLHASRTRTAEWVGSKAYPKFRVLLKKFAPMGSACTFPVQ SIIYCTVAVAVDLHLRGRRPSARAIEEASARCSIFGDDIIVPKGNCATVIRVLEYLGL KVNVDKTFYTGKFRESCGFDGWGGYDVTIPKLLDLPDTVRFSEVGSFVEVSNNYFHKG FWKTSNWLLHRLDSKHLGLVPVSTNREQNCLIYSYSGVDESRLKKRYNDKLQRVEVNG IKTKSPKTKIPSSPASRLFQWFIEKPAPDTKWVSGVVERKSSSTSSGWYPLDIILARV NYANARSSRDA" ORIGIN 1 cgcgtaacgc gcctctccga gtaccggctc acaatcatgt ccttccggtg ggttactagc 61 caacataagg ctagaccctg gagtagcagg agtcatctta tggaacctag acataggtcc 121 aatcatagtc ttgtcgctgg aggctctgtt tgggccaacg gcgttaagca atatgatgaa 181 acttatatcg aagtcgaaga tgatatggac gatttcacag gaaagcacag gagaaagaag 241 cctattcggc tcctccctga ctctaactgt gatatctacc gtaacacgcg tgtaccgcct 301 acttatactg ataccggggg ctacttcgag ttgaagcaag tccggccata taaggaccag 361 tacgcgcggg tcgatgaata tccttggaga ggttccggta ctagagaaag cgaaaatgct 421 tactttatta acgtacttct cgctaaaact catccttttc ggtcggaata ttctgttccc 481 acctctatgg ttgagctctt ggatcttccc tcgatggcat cgatcgtcgc taagtctttt 541 tctggactgg ttgggtcatc ctacctttct tataggtttg gatttcctca atttgtccaa 601 gatattaaga ctttgagcgg catcacaaag gccttagaaa gccgcgtgaa agagtatagt 661 tctcttaatc gccatggagg tctccgccgc aatgtgaaac taggtgagaa tgtctaccga 721 gattctggta ggcagactat ctggtccact tggggtcact tcgtcaccgc tgaggtaact 781 tccattcgga agtacatcgt ccgcggcagc gtcagatggc gctggaaaga cggagctgat 841 atttctctct cgaaacttga agccttcaac gaggccgtta aggccatctt tgacatcgga 901 gaactggatt ccactacttt gtggaattct gttccgtgga cgtggcttgc tgactacttt 961 gtggacgtct caagttggct tcaagccaat gagaaccaca gttgggtcga accgtatgat 1021 atctctatca ttcggcgttt taagagtaga acggagatcg acaatttgga gtacgatgtt 1081 ggattcggga ttaagggcca tattaccggc tctatatatt ctcgtgattc caacttgaac 1141 tccacgttgt ttcctgctgc aaggtactcg ttcttaacaa caacgcagta ccttactatg 1201 cttgctctcc tcggaaaatt ccgaggcggt taagctactt cccactctgt gtgtgtgtca 1261 aggagacata atgactattt ctagtccgat tacgatcact gtgaatgcgg tggcaaaagt 1321 tttgccacgc atcaaccagg acaactttgg gtcaacttat cgactcaagg aagccaacga 1381 tgaatgggaa ctgaatatcc gtcataccta cgaaggtaag gcgggtccag cccagatcga 1441 acgacataat gcggatttta agcacacgaa cttcgtcggt accgaccgta ttccggtcgt 1501 gacccaaacg tatttcgtta tgcgtaatcc ccgcaaccag tcgggtgtcg actctgctca 1561 gattacctcc ggtcttttga cctggggctc ctcggcagcg tcggatctca gcgccggtca 1621 gaattaacat ctctgaccta ctcataactt cacacagttg aaggttgggt aaatcgacta 1681 gcaataggct cttggagcga gatttctcaa atggaaacca cgccgaaaag ccttgtttcg 1741 tctctgtgcg ggtatgtgcg cgcggtcttc tcagactgcg cgtacctata tgcacgaccc 1801 agtgattgtg agcgcgattc ctcgcgcctc tgtcacgaac tgggcgcaaa aggagctcgt 1861 ttgctccttt tggatctccc agccgccgcc aaacactttg ataagtgtct ggatcaaggc 1921 gagtacgtac cttctaacct gcccctcacg gggttggtgt caaaggcggt acgggtccct 1981 gcttttatgc ggggtctgta cctactcgtc tttgaaagtg acgggaagct tcggtcgact 2041 ccctgcccta atgccatctt ggccattagg acactcttaa aaggggtcaa taaacttaac 2101 ctacctttta cagacaggag tctttgccat gaactcaaag agttcgaagc aattgagcgt 2161 acgttgcgtt cgccgcacct taactggtgt ggcgaccgcc tctctgatgt cgacccaggg 2221 ttgttccctg ggggcatatc agatcggaga gtgtccgaaa ctacctcctt cggaggtggt 2281 ctcggagccc tggttcggcg tctgcatctc gcggacgccc ttccaagaga aacctctcag 2341 tacgggttgg tacttggaga cagagcactt ccgtgcaatg ttgacctagc actaatcaac 2401 acggtccagc ttgtagctga tatcgtgtcc tccagtttcg gtgatcttca tgttgaagat 2461 ccatcggaac taccgaagca tggtcctggc gtagtcgcag atgttaagaa gggtgagtca 2521 aagtttgact ttccctactg gacacctaag actgacgcta tcttccccta tgactggtac 2581 ggcacccata ctttgggctg tcgtaccttt ataaggtctg ctttgaactg ggtctctcat 2641 gaggccccgt ccaagatcgt tgcagttcca aagacggcta agggtcctcg gcttatcgcc 2701 gctgagcccg tacaccatca atggctgcaa cagctgatta tgaatcagct tgttcgcaga 2761 ttagagcaaa ctccaattgc tggtgctgtt cgtttcgacg atcagtcccg aaatcaaagt 2821 tttgctcgaa aagggtctat tgatggttct tatgccacca tagatctctc atctgcgtcc 2881 gatcgtgtta cgtgttggat ggtcgagcgc ttttgcaggg ctaacttgtc cctacttgag 2941 cgtctccatg cttctcgcac gcgaacggca gagtgggtcg gatctaaagc ttacccaaaa 3001 ttccgggttt tgctaaagaa gttcgcaccc atggggtcgg cttgcacttt tccagtgcag 3061 tcgatcatct attgcacagt tgctgtagcc gttgaccttc acttaagagg tagacggcct 3121 agcgcccgtg caatagagga agcctcagcc agatgttcca tttttgggga cgatattatc 3181 gtccctaaag ggaactgtgc aacagttatc cgagtccttg agtatttagg acttaaggtc 3241 aatgtcgaca agaccttcta tactggtaag tttagagagt cttgcggctt tgatggttgg 3301 ggtggttacg atgtgaccat tcccaagctt cttgaccttc cggatactgt ccgcttctct 3361 gaagttggct cgtttgtgga agtttctaac aactacttcc acaaagggtt ttggaagacc 3421 agtaattggc tcctccatcg cctcgattcc aagcatcttg gcttggttcc cgtgtcgact 3481 aacagggaac agaactgctt aatctactca tactctggag ttgacgagtc tcgccttaag 3541 aagcgataca acgataagct ccaaagagta gaggttaatg gtattaagac taagagtccc 3601 aaaaccaaaa tacctagcag tcctgcctct cgacttttcc aatggtttat agaaaagcca 3661 gcacctgata ccaagtgggt atccggtgta gtcgagcgga agagctcttc tacgagctct 3721 gggtggtacc ctctggatat catacttgct cgcgttaact atgcgaatgc aaggtccagc 3781 agggacgctt agagaggc //