LOCUS BK013459 3697 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.4_46 genomic sequence. ACCESSION BK013459 VERSION BK013459.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.4_46 ORGANISM ssRNA phage Gerhypos.4_46 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus tellurivivens. REFERENCE 1 (bases 1 to 3697) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3697) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-3697 MN032980.1 1-3697 FEATURES Location/Qualifiers source 1..3697 /organism="ssRNA phage Gerhypos.4_46" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786349" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus Gerhypos.4_46" gene 86..1306 /gene="Gerhypos.4_46_1" CDS 86..1306 /gene="Gerhypos.4_46_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50201.1" /translation="MVVAFFFPRRRVRDTFSDGLTGQSRGSTFGAWVPYDQPGQINEE CIDSVHPFDPRGRATRGDVGGPFELTRTETTYGSTYSLNNSLCVGTVGAKGYSGWLAR YNGTSMISVSSLQAWSATAVARSTPTSPVSGLATFLGELRSDGLPHIPGSEARATTLS ARSAGSEYLNVEFGWLPFISDIRKFAFAVKNSKEIIDDYRKGSDTKIRVRYGGQGDSS SLLSSGSGFASPSNLNIPTFVNIDERTETSRKFSGAFRYHIPMGNSQYDRLVRYEAYA NRLVGSRITPEVLWEVAPWSWAVDWFTNTGDVIHNISSLGSDGLVMQYGYATDVVRYT ADLRARVTSTQAGVPVNTFLSRFDERKYIRRIQATPYGFGLDWDGFSPRQIGVLVALG LTRGQRPGYRGRDT" gene 1382..1744 /gene="Gerhypos.4_46_2" CDS 1382..1744 /gene="Gerhypos.4_46_2" /codon_start=1 /product="coat protein" /protein_id="DAD50202.1" /translation="MAFADPQSVTINAVAQTLPRVSSGVNVGSFKKDDATVALSVSHQ YGTRNRRTIRLDHQKYAADPLVSSTNVLRSMSVYMVVDTPLQGYTNTEQKQIVDALVA YLTASTGAKVTQLLGGEN" gene 1799..3601 /gene="Gerhypos.4_46_3" CDS 1799..3601 /gene="Gerhypos.4_46_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50203.1" /translation="MKSLTELWNKLSLELGMVCQTSTTRDRQTVKSRFEHEGVSFLTI TLANFGQELQKALDQGFVDHDQFLGFSRSGGLPRFLGGFLDRVFDRKSGRLLDDPCVD SIFAIRQLTLLFAKILLPCTSARNEKAIQGFIECESDIRRSDRTILPELIQEFQRISL LLFGDVMAEVDTAIYDGNVDPRHGPGATADRLRGNAKFDLAEWTQRLEDVFPYGDNAI PNWRFNYRLDPVDIREPGRERPVKVTLVPKTLKTPRIIAVEPTCMQFMQQAIMEKIVK CLETDNTVSGMVGFQDQTPNQRMAKEGSEGGGLATIDLSEASDRVSNQHVRAMVAPFP WLAKGLDATRSRKADVPGKGVHRLAKFASMGSALCFPIEAMVFTTVVIMGIQKSQGRQ FTRKDIKSYSGKVRVYGDDIIVPVDSLNHVAGMLESFGLKVNYNKTFGTGKFRESCGR DYYAGTDVTPVRVRHVFPSRRKNVTEVIAAVSLRNRLYEAGLWKTAIWMDSWIDPLLA GRYPYVSPDSPVLGKVSFLGYDSQRLSPDTHQPQVKGWTVFSVIPDSTVSGEGALLKW FLKRGDEPFADRNHLERSGRPRSVDIRSRWANSL" ORIGIN 1 gggagcccga aagctccctg ccggtgcttg cacactcccc tagagtcata agactctagg 61 agccatccat ataccgggac caccaatggt tgtcgctttc ttctttccca gacgtcgcgt 121 gagagatact ttctccgacg gtctgactgg tcagtcgaga ggctctacct ttggtgcatg 181 ggtgccgtac gatcaacctg gacaaatcaa tgaggaatgc atcgattcgg tgcatccttt 241 tgaccccagg gggcgtgcga cacgtggtga tgttggcggc ccgttcgagt taactcgaac 301 ggagacgacc tacggttcca cttactcgct gaataacagc ttgtgtgtgg gtacagtagg 361 agcgaaggga tattctggct ggttggcccg ttacaacggt acctccatga tcagtgtctc 421 ttcactgcaa gcttggtcgg caacggccgt agctcgctcc actccaacaa gtccagtctc 481 aggtctagcc accttccttg gtgagcttag atctgatggc ttaccgcata tccctggttc 541 agaagctcgg gcaactacgc tgtccgcaag gtcagcaggt tccgaatacc tgaacgttga 601 gttcgggtgg cttcctttca tatcggatat ccgaaagttt gcttttgccg tcaagaactc 661 gaaagagatc attgacgact atcgcaaagg gtccgatacg aagatcaggg tacggtacgg 721 aggtcaaggg gactcgtctt cgttgttgag ttctggaagc ggttttgcct ctcccagcaa 781 tctcaacatt cccacgttcg ttaatatcga cgaacgtacg gagacgagcc gtaagttctc 841 tggcgctttc aggtatcaca taccgatggg aaactctcag tatgatcgcc tggtccgcta 901 cgaagcctac gccaaccgcc ttgtgggctc ccggattact ccggaagtcc tctgggaggt 961 tgctccttgg tcatgggccg tcgattggtt caccaatact ggcgatgtta ttcataacat 1021 ctctagtctt ggttccgacg gtttggtgat gcagtatggc tatgcgacgg acgtagtccg 1081 ttacacggct gacctccgcg ctcgggtaac ttcaacccag gccggcgtcc ctgtgaatac 1141 ctttctttct cgtttcgacg agaggaaata tattcgcagg atacaggcaa caccatatgg 1201 ctttggactc gactgggacg gcttttcgcc gcgacaaatc ggagtccttg ttgccctcgg 1261 tttaactcga ggacaacgtc ccggctatcg tggtcgggac acctgaccgc cccattccgg 1321 ggccgtctga cgacaaaatg cgccctttcg ggcgtcatcc ggtcataaga aggagttttc 1381 catggctttc gccgatccac agtcagttac catcaacgcc gttgctcaga cgcttccgcg 1441 tgtgagctct ggcgtgaatg tcgggtcgtt caagaaggac gacgcgacgg tggcactttc 1501 tgtgtcgcac cagtacggga cgcgtaatcg tcggacgatc cgtctggatc accagaagta 1561 cgcggccgac ccgttggtca gttcgaccaa cgtgctccgc tccatgagcg tgtacatggt 1621 ggtggacacc cctcttcagg ggtacaccaa caccgaacag aagcagattg tggacgccct 1681 tgtggcgtac ctgaccgctt ctaccggtgc gaaggtcacc cagcttctgg gtggcgagaa 1741 ctgattccag cttctcgcaa agtcatggca ggatagtcca cctctattag gagggaactt 1801 gaaaagcctg acagaactct ggaacaagct gtcccttgaa ttagggatgg tgtgtcagac 1861 aagcaccact cgtgacagac aaactgtcaa gagtcgtttc gaacacgaag gggtctcgtt 1921 tctcacgatt accctggcaa actttggtca agagctccaa aaagccctgg accaaggttt 1981 tgtcgatcac gaccagtttc tcggtttttc gagatctggc gggctccccc gatttctcgg 2041 aggtttcctt gatcgtgtgt tcgatcgtaa gtctggtcgt ctcctcgacg atccctgtgt 2101 ggattccatc ttcgctatta ggcagttaac actgctgttt gcgaagattc tcctcccgtg 2161 cactagtgcg cggaatgaga aggccattca gggctttatc gagtgtgagt cggatatccg 2221 caggagtgat cgtacgatcc ttccagaact cattcaagag ttccagagga tctcactcct 2281 tctttttggc gacgtcatgg ccgaggtcga tactgccatc tatgatggca atgttgatcc 2341 acgtcatgga cccggcgcca cggctgatcg tctccgcgga aacgcgaagt tcgatcttgc 2401 cgagtggacc cagcgtttgg aagacgtctt cccttatggg gataacgcca tcccgaactg 2461 gcgatttaat tatcgcttgg atccagtgga tatccgcgaa cccgggagag agcgacctgt 2521 caaggttact ctcgtcccta agacgctcaa gaccccacgt atcatcgccg ttgaacctac 2581 ctgcatgcag tttatgcagc aggcgatcat ggagaagatc gtgaaatgcc tcgaaaccga 2641 taacacggtc tcgggcatgg tcggtttcca agaccaaact cctaatcaga ggatggctaa 2701 ggagggctcc gaaggcggtg gtctcgcgac catcgatctt tcggaagcct ctgaccgggt 2761 ctcgaatcag catgtacggg ctatggtggc tccgttccct tggcttgcta aggggttgga 2821 tgccacccgt tcccggaagg ctgatgtacc tggcaaaggc gttcatcgcc tcgccaagtt 2881 cgcatctatg ggttctgcgc tctgttttcc catcgaagcc atggttttta caaccgtggt 2941 gatcatgggt attcagaagt cgcagggacg ccagtttacc agaaaggaca ttaagtccta 3001 ctctggcaag gtgcgtgttt acggagacga tattattgtc cccgtagaca gtctcaatca 3061 cgtcgctggg atgcttgagt cttttgggct caaggtcaat tacaacaaga cttttggaac 3121 cgggaagttc cgggagtctt gtggtaggga ttactatgcg gggacggatg ttactccagt 3181 ccgagtccga catgtgttcc cttcccgacg taagaacgtg acagaggtga ttgctgccgt 3241 gtctcttcgg aaccgcctgt acgaggcggg tctctggaag acggcgatct ggatggactc 3301 gtggatcgac ccgcttttgg cgggaagata cccttacgtc tctccagatt cacccgtttt 3361 ggggaaggtc tcgttccttg gctacgatag ccagagattg agccctgaca ctcaccaacc 3421 ccaggttaag ggttggacgg tgttctccgt catacctgac tctacagtca gtggtgaggg 3481 agctctcctt aagtggttcc ttaaacgcgg cgacgagcca ttcgccgaca ggaatcatct 3541 ggaacgctct gggcgtccta ggtccgtcga cattagatct aggtgggcga actcccttta 3601 gggagttcgt gggtcacccg acccgaagag gagccaaagc ttctctcttt tgctgctcgt 3661 cagcaagggg ggatgcgctt ggcagcgcat ctcctct //