LOCUS BK013512 3668 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.4_47 genomic sequence. ACCESSION BK013512 VERSION BK013512.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.4_47 ORGANISM ssRNA phage Gerhypos.4_47 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Molucevirus; Molucevirus chthonovivens. REFERENCE 1 (bases 1 to 3668) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3668) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-3668 MN034638.1 1-3668 FEATURES Location/Qualifiers source 1..3668 /organism="ssRNA phage Gerhypos.4_47" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786350" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Molucevirus; Molucevirus Gerhypos.4_47" gene 85..1245 /gene="Gerhypos.4_47_1" CDS 85..1245 /gene="Gerhypos.4_47_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50388.1" /translation="MARTSRNRSRPFTCKGGAQQIWLGDTLANPGIQQDRVFSNTCAD SHGSPVVDSPLSINTYKGTYPMLNGTVIPTLQSPKNHTVFVDLTYTGVPTALSTMAVQ PAPSGWLLDLVAGTNPSRPVIGIPIWAQNLKELPKMLKQLGDAILSPKSLVKPKGLAG SYLGVQFGWLPLIEDLKKLVDFQSYVLKRNKELADLYSGKGLRRRLKFTDDTVNTPVS VNTATYANAIIKSTSSVDVKRRTWGTIHWYPTTPPQYHPDDHKWNSLVNQIVLGATPE GLAKGLWDVIPWTWLVGWFTNLGKYTLAHSYTVPAQHSGGCLMREAIGTWTAGDSTVS AGSGKVYQYGQLTRSLKTRAVSSVVTVGVNMPYFDMFRLSILGALFTQRFIR" gene 1278..1655 /gene="Gerhypos.4_47_2" CDS 1278..1655 /gene="Gerhypos.4_47_2" /codon_start=1 /product="coat protein" /protein_id="DAD50389.1" /translation="MLGSTMLITLDGAGGIVKTLPLINQDGYSSEYFLDELTVSYRAK VRHSRDTVKAGTQPYDRHTVTYTRFLKPTEAVPLGSQSDITFTIRNDPNGASSDIIDV SEAMSFYMVKAGGVAAKLLGWES" gene 1721..>3668 /gene="Gerhypos.4_47_3" CDS 1721..>3668 /gene="Gerhypos.4_47_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50390.1" /translation="MRRNESYAEFILGLYEAQLKDCVSQYPGLAKEFLRDKTRLSSAI EHNGLHFFMEIMPAWRKHFDQCLAAGRLTRTGLIHFGSYKSEGAVPKLFRGLTLRVFN LNGELKPDPDPNAIRWIRQLLGVVKRLRMECGPSDRSDAVKEFLRTDQEVRTGTLDWD SGDDLDTGKLRDISFTDDTPTPSESKQGLLPCFSVSSLPYRHAECIQQVADYISSCLG EYNPTETRFRHGPGAVSDQKFEAYKYAFKNWPDRLDKVFPMADFAVANYANWEDSSLY KCTDAEVRKEFPAKLIAVPKSLSTPRLIASEPTALQWCQQSVRDHLYSRVRRTPLGNF VDFTRQDANGNLALEASRTGEHCTIDLSSASDRISCWFVERLFRRSPDLLAALRATRS KFIVQDICRDSPRYNKLRKYSTMGNATTFPVQSLAFLAICLGTVLYVRNQRFSQSWLK SLGKGTVRVFGDDLIVPKDCSGSVVDALHALGLRVNPAKTFLTGLFRESCGVDAYAGH DVTTTSILDVPIRAKPGSIVSSVDVHNNLVRKGYYNTAAFVQKTVMRCGFDKIRNVTH GSGSFGWFDNYVSATTVLETRRCRDTQVIQVRCMVVKTKQRRNQPECSAGLLQFFTEA ARVVETSISGIGSPTQRVKAKLSFD" ORIGIN 1 cccgcatgtg cgggtctccg agccttagcg ggctttcgat aatcgtccct cttacagtag 61 acagaccaat gtgagaccta aactatggcg agaacatcca ggaaccgatc tcggcccttc 121 acctgcaaag gtggagcgca gcagatttgg ctcggggata ctctggcgaa tccgggaatt 181 cagcaagatc gcgtgttttc gaacacgtgt gctgattccc atggttcgcc tgtggtagac 241 tctccactca gcattaatac gtacaaaggt acgtatccta tgttgaatgg gacagtcatt 301 cccacactcc agagtccgaa gaatcacact gtctttgtgg atctgaccta tactggcgtg 361 ccgactgcgc tgtctacgat ggcagttcag ccagcaccca gtggatggct tctcgatctc 421 gtggcgggca ctaatccgtc ccgccccgtt atcgggatac ccatctgggc tcagaacctt 481 aaagaacttc ccaagatgct caagcagcta ggggatgcca ttctgagtcc aaagagcctt 541 gttaaaccga aaggtttagc aggtagctat ttgggcgttc agtttggctg gctcccgttg 601 attgaggatc taaagaaact cgtcgacttc cagagttacg ttttgaagcg taacaaggag 661 ctagctgact tgtattctgg gaagggtcta cgtcgtcggc ttaagttcac tgatgatact 721 gtcaacactc ctgtaagtgt caatactgcc acttacgcga atgccatcat caaatcgact 781 agctctgtcg atgtgaagag acggacctgg gggaccattc attggtaccc cacaactccg 841 ccacagtacc atccagatga ccacaagtgg aacagtcttg tcaaccaaat cgtcctgggt 901 gctacacccg aaggccttgc aaaaggtctt tgggatgtta tcccctggac gtggttggta 961 ggctggttca ctaacttagg aaagtacact cttgcacatt cctatactgt ccctgcccaa 1021 cactcaggcg gatgcctgat gcgtgaagca atagggacgt ggacagctgg tgattccaca 1081 gtgagcgccg ggtctggtaa agtttaccag tacggccagc tgactcgatc gctgaaaacg 1141 cgtgcggttt catcggtcgt tactgtaggc gtgaacatgc catactttga catgttccga 1201 ctgtcaatcc ttggggcatt attcacacag cggtttatcc gctgagcgtt tagtgcaccg 1261 ggggaaaggg aactcttatg cttggctcta cgatgctgat tactttggat ggcgcgggag 1321 ggatcgtgaa gaccctaccg ctcatcaacc aagatggcta ctcgtccgag tacttcttgg 1381 acgagttgac cgtctcgtac cgggcgaaag tccggcactc gcgagacact gtcaaggctg 1441 gcactcagcc gtatgatcgt cacactgtga cgtacacacg gtttctgaag ccaactgagg 1501 cagttcccct tggttcgcaa tccgatatca cgttcacgat caggaatgat ccgaacgggg 1561 catccagtga catcattgat gtttccgagg ccatgtcttt ctatatggtc aaggctggag 1621 gggttgctgc aaagctactc gggtgggagt cttaacctac ccgtgaaagc gtcagtatcg 1681 ttctgctgag ccgtagaacc taatcatagg agtcaaaccc atgagaagga acgagagcta 1741 cgcagagttt atcctaggct tgtacgaggc acagttgaaa gattgtgttt cgcaataccc 1801 gggacttgcc aaggagttcc tgagggataa aacccgcttg agctccgcga ttgaacataa 1861 tggcctccac ttcttcatgg agatcatgcc agcttggcga aagcactttg atcagtgcct 1921 agccgctgga cgccttactc gcactggttt gatccacttt ggatcataca agagcgaggg 1981 tgcagtcccc aaattgtttc ggggattgac actacgcgtt ttcaatctta acggcgagtt 2041 gaagccagat cctgatccaa atgccatccg ttggattaga caactcctag gagttgtcaa 2101 acgccttcga atggaatgtg ggccctctga ccgcagtgat gcagtcaaag agtttctcag 2161 gactgaccaa gaagttagaa ccggaaccct tgactgggat tctggtgatg acttagacac 2221 agggaagctt agggatatct ccttcacgga cgatactcct acgccctctg agtctaaaca 2281 aggtttgcta ccttgtttct cggtctcatc tctgccttac cgacatgcgg agtgtatcca 2341 gcaggttgct gactacatct cttcatgttt gggtgaatat aacccaacag agacgaggtt 2401 tcgacatgga ccaggtgccg tttcggacca gaagtttgaa gcgtataagt acgcttttaa 2461 gaactggcct gataggcttg acaaagtctt tccaatggca gatttcgcgg ttgcgaatta 2521 tgctaattgg gaagattcat cactatacaa gtgcacagac gcggaagtcc gaaaggaatt 2581 ccccgccaag ctcattgcgg tcccgaagag tctttcgact ccgaggctta ttgcttcgga 2641 accgacggcc cttcaatggt gccagcaatc tgtgcgtgac catttgtata gtcgtgtgcg 2701 tagaactcct cttggcaatt ttgtcgattt cactcgacag gatgctaatg ggaatcttgc 2761 actcgaagcc tcccgtaccg gagagcattg tacaattgac ttgtccagtg cttctgaccg 2821 gatatcctgt tggttcgttg aacgtctttt cagacgctct ccagaccttc tcgctgcgct 2881 cagagctaca cgctctaagt tcatcgtaca ggatatatgt cgagattccc cgcggtataa 2941 taagctgcgg aaatattcga caatgggtaa cgccactacc ttccccgtac agtccttagc 3001 cttcctagcg atttgtcttg gaaccgtact ttatgtacgg aaccaacgct tttcgcaaag 3061 ttggctgaag tctctcggga aaggcacggt ccgagtcttc ggtgacgatt tgatcgttcc 3121 caaagactgt tccggtagtg ttgtcgatgc gctccatgcc ctcggactga gggttaaccc 3181 agcaaagact ttcttaacag gtttgtttag agagtcttgc ggagttgatg cctatgcggg 3241 tcacgacgtg accacaacta gcatcttgga cgtaccgata cgagccaagc cggggtccat 3301 tgtatcatca gtagacgtgc ataataacct cgtaagaaag ggttattata acacggctgc 3361 gtttgtacag aagacagtca tgcgttgcgg gttcgataag atccgcaacg tgacgcatgg 3421 atccggctcc ttcggttggt ttgataacta tgtgtccgcc accaccgtgc tagaaacacg 3481 gaggtgtcga gacacccagg ttatccaagt ccgctgtatg gtcgtaaaga ccaagcagag 3541 acgaaaccag ccggagtgta gcgctgggct gcttcagttc tttactgagg cggctagggt 3601 tgtcgagacc agtatttctg ggatcggctc acctacccag cgggtcaaag ccaagctaag 3661 ctttgact //