LOCUS BK013487 3369 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.4_50 genomic sequence, sequence. ACCESSION BK013487 VERSION BK013487.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.4_50 ORGANISM ssRNA phage Gerhypos.4_50 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Phulivirus; Phulivirus agrivicinum. REFERENCE 1 (bases 1 to 3369) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3369) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN033247.1 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3369 /organism="ssRNA phage Gerhypos.4_50" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786354" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Phulivirus; Phulivirus Gerhypos.4_50" gene 134..1249 /gene="Gerhypos.4_50_1" CDS 134..1249 /gene="Gerhypos.4_50_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50297.1" /translation="MDNSYTTYGPVSHYDWNGNLTSTSSAPTKVYTFQKSTTVKRKKP SDLFASGTNRSVSESSTIFPTASRLNTGNTTTIAPASYFGTAFMNSDSGVLEKWTESD FGDLEQRVLAKIKGQKVDLATAIAEYKQTVDLVTGAAQNIYAVYQSFRSGRAPADIAR ALANPRNRNGRNLANNWLQYQYGLKPLVSDIYGSAEALRDVLARGKTFKVSVSDHQSA VREKTYTLGSSLSQVELNRRVTARYKVSSQALKSLAEVGITNPAVVVWELIPYSFVID WMLPVGDWLSSLNALSGVEDLIVHKGGKRVATNSFFLHGSDGNGRIIGSTISTQFKTD TRRFAGGGLGVGWPRFKNPVSIGHLLNAMALLRQLKS" gene 1269..1661 /gene="Gerhypos.4_50_2" CDS 1269..1661 /gene="Gerhypos.4_50_2" /codon_start=1 /product="coat protein" /protein_id="DAD50298.1" /translation="MSQVTGPLTINNGAATPVAKTFSPERIVPELSTFTERSTGVSAG YLRLGVGFSPASKARVTNKVDVTLDFPVLSTVNGVSSVAYVGRFRGTFTMPDTMTAAE RADFAAFVANALDITQVRGVIKDLDPLY" gene 1707..>3369 /gene="Gerhypos.4_50_3" CDS 1707..>3369 /gene="Gerhypos.4_50_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50299.1" /translation="MRVSHDSKVSTLELRVVETLCKSINTPRSLAVALLIQYSEFQQL VDLKIDSRHYSSHDVFSCDYLVTSILSKNPRLPLSVNRRDVAIAKFYAAEDACRLTNS RISEFLENPQLVDSDIRTVIFSMQSFIQEILGPFPTRKDLAYAEENMRFGPGATTSVS GVVTQGKKYSLRTPEVTSRLLPFRTFCFPDLWKENVQEVSIRDFSKLAVVPKNAKTDR VICIEPDLNIFVQLGTGALIKRKLLRSGLDLSSQLRNQELAMQAHRLQLATVDLSAAS DTISREAVWLLLPPAWADLLHFSRVDSTEINGDVLPLEKWSSMGNGYTFELETLIFFA LAKVCARQSGASDENVTAYGDDIIIPRASLGLLMRTLDFLGFSVNREKTFGEGRFHES CGADYFDGHNVRPVFFRSEHHDFQTICYLYANNLRRWARRLYDNDSCDSRVLPAWLRC FTAVEPAFRYFIPEGFGDQGFIESFDRSLPSVLYDDRRRGWAGYNFRYRSVASREAVI DQKGAYFAFLNGTVSEFRKGSESLRGRFRPPKTEVGYVLDWPNLGP" ORIGIN 1 cgacggtctg tcgacatatc tttccagata tgatttacga tctagtggat cctttgatcg 61 ggcaatttcc cttgtggcag atgccacact ggtattggag cctcgttaga ggttttcttc 121 ttggagctag tagatggaca actcatacac aacctatggt cctgtttcgc attacgactg 181 gaatggtaat cttacgtcaa catcgtcggc tcctacgaaa gtgtatactt tccagaagtc 241 gactactgta aaacgtaaga aaccttctga tctttttgcg tcggggacaa atcggtctgt 301 gtctgagtct tctacgatct tccctacggc ctctcgtctt aacactggta acactactac 361 gatagctcct gcatcatact ttggtaccgc ttttatgaac tccgattctg gagtccttga 421 gaagtggacc gagtctgatt ttggtgacct agagcagcgt gtccttgcta agattaaggg 481 tcagaaggtt gatctggcta ccgccattgc cgagtataaa caaactgttg atctcgtcac 541 tggcgctgca caaaacatct acgcagttta ccagtctttt cgttccggcc gggcccctgc 601 ggatatcgca agagctctcg caaaccctcg caatcgtaac gggcgtaatc tcgctaataa 661 ctggttgcag tatcaatacg gtttgaagcc tcttgtctct gacatttatg gaagcgcgga 721 agcgctccgt gatgtcttgg ctcgaggaaa aaccttcaaa gtatccgtat ctgatcacca 781 atcagctgtt cgtgagaaaa cttacacgct tggttcttct ctgtcgcaag tcgagttgaa 841 tcgacgtgta acagcacgtt acaaggtgag ttcgcaagct ctaaaatcgc ttgcggaggt 901 cggaatcaca aaccctgccg ttgtcgtttg ggaacttatt ccctactcgt ttgtcatcga 961 ttggatgctt cctgtcggag actggctgag ttcgcttaat gcgctctcag gagtcgaaga 1021 cttgatcgtc cataaaggtg gtaaacgtgt agctacgaat agtttctttt tgcacgggtc 1081 cgatggtaac gggcggatta ttgggtcaac catctcaaca cagtttaaga ccgacactcg 1141 gcgttttgcc ggtggcggcc ttggtgttgg atggcctcgc tttaaaaatc ccgtatctat 1201 cggccacctg ctaaacgcaa tggccttact ccgtcagttg aaatcctgac actttattgg 1261 agcactccat gtcccaggta actggtcccc tcaccattaa taatggtgca gcgactcctg 1321 tcgctaaaac tttcagccca gagcgtatcg ttccggagct gagcacgttc actgagcggt 1381 caaccggcgt ttctgctggt tatctccgct tgggagtcgg gttttccccg gcctccaagg 1441 ctcgcgtcac caataaggtt gacgtgacct tggatttccc cgtcctttcg acggtgaacg 1501 gcgtgtcgag cgtggcgtac gtcggtcgtt tccgtggcac ctttacgatg ccggatacga 1561 tgactgccgc cgaacgtgcg gactttgcgg cttttgtcgc aaatgccctc gacatcacgc 1621 aagttcgtgg cgtgattaaa gatctggatc ctctgtacta aaactacagt agtataatcc 1681 agtttattaa tccgccagga gatttcatgc gtgtcagcca tgattctaag gtgtcaacct 1741 tagaactgag ggttgttgag actctttgta agagcatcaa caccccccgg tctttagccg 1801 tagccctctt gatccaatac agcgagtttc agcagctagt ggatttgaag attgattctc 1861 gtcactactc atcacatgat gttttttcgt gtgattactt agtgacgtct attctttcaa 1921 aaaatccccg gttgccgctc tctgtgaatc gtagagatgt tgctatcgct aaattttacg 1981 ctgctgagga tgcttgtcgc ctcaccaact ctcgtatttc tgaatttctc gagaatccgc 2041 aacttgtgga ttcggatatc cgcactgtta tcttttcgat gcagtccttt atccaagaaa 2101 ttctcggtcc ctttcctact cggaaggacc tggcttatgc cgaagaaaat atgagatttg 2161 gtccgggggc aacaacctca gtttctggtg ttgtgactca gggtaaaaag tattcacttc 2221 gtactcccga agttacgtcc aggttactgc cttttagaac tttctgtttt ccagatctct 2281 ggaaagagaa tgtacaggaa gtctctattc gagacttttc taaattggca gtcgttccca 2341 agaatgcaaa gacggatcgt gtgatttgca tcgaacccga cttgaatata tttgttcaac 2401 tcgggactgg tgctttaatc aaacgtaagc ttttgcgttc tggactcgat ctgagttccc 2461 agctgcgaaa tcaggagctt gctatgcaag cacaccgact ccaattggcg acagtagatc 2521 tctccgctgc tagtgatacc atttctagag aagccgtttg gttattatta cctccggcct 2581 gggcagatct tcttcatttt tctcgagtcg actcgacaga gattaatggt gacgttctgc 2641 cactcgaaaa gtggtctagt atggggaatg ggtatacctt tgaacttgaa acgctcatat 2701 tctttgcttt ggcaaaggta tgtgcgcgtc aatctggtgc gagtgatgag aatgttaccg 2761 cttatggcga tgacattatc attccgcgtg cctcattagg gttactcatg aggacgctag 2821 acttcctcgg gtttagcgtg aaccgtgaaa agacctttgg cgagggtcgc tttcacgaaa 2881 gttgcggtgc agattacttt gatggccaca atgtccgtcc tgtattcttt aggagtgaac 2941 atcatgactt ccaaaccatc tgctacctct atgctaacaa cttacgtcgc tgggctcgtc 3001 gtctttacga caacgattct tgcgacagta gggtgcttcc tgcttggtta cgctgcttta 3061 cagcagttga accagctttc cgatacttca tacctgaagg tttcggagac cagggcttta 3121 tcgagtcatt cgaccgatca ctcccgagtg tcctctacga cgaccgtcgc agagggtggg 3181 caggatacaa cttccgttac cggagtgttg caagcagaga ggccgtaatc gaccagaagg 3241 gggcatattt tgccttcctg aatggaacgg tttctgaatt ccgtaagggt tcagaatcgc 3301 tccgtggccg atttcgtccg ccgaaaaccg aggtgggcta tgtcttagac tggcccaacc 3361 tgggccctt //