LOCUS BK013460 4452 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.4_51 genomic sequence. ACCESSION BK013460 VERSION BK013460.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.4_51 ORGANISM ssRNA phage Gerhypos.4_51 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Blumeviridae; Pacehavirus; Pacehavirus humicola. REFERENCE 1 (bases 1 to 4452) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4452) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-4452 MN036075.1 1-4452 FEATURES Location/Qualifiers source 1..4452 /organism="ssRNA phage Gerhypos.4_51" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786355" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Blumeviridae; Pacehavirus; Pacehavirus Gerhypos.4_51" gene 103..282 /gene="Gerhypos.4_51_1" CDS 103..282 /gene="Gerhypos.4_51_1" /codon_start=1 /product="hypothetical protein" /protein_id="DAD50204.1" /translation="MDLTNPLLTSDTIQMLVSSVTGQGNEKLSELEAERLLNAIARVQ AGIPTGVQNPNRTGM" gene 511..1821 /gene="Gerhypos.4_51_2" CDS 511..1821 /gene="Gerhypos.4_51_2" /codon_start=1 /transl_except=(pos:511..513,aa:Met) /product="maturation protein" /protein_id="DAD50205.1" /translation="MDHVEVEAELSYVPSYTDSYPAASGLEPTRIGFRCFNSSGSKTT IYAPRGLGVDGQIGIYYKTHYIVSNSDPYTFSVVQYDRQAEKGAMWSAQFGIIVSTFT YLGVVSNKPQYRQTQQDWTVNWKDFVSTWEELTPAIVLQAASSPRGDIKTLSTTTYAI YTAQTAASLSVESVRRDLRIQEIDHLLDVEFPLEDVHPGILAMKAAQKMNANQTNMIA FIRDLRNPKQLIPKLKKLDQLKTHASNYLAFEYGVLPTISDLQEIIGSLKKIKPYVDR NGFSTYSAGHTDSLSIGNYTFELEQHVKVAVDDNDSGLSTVLRNLESSGFAPTLQNIW DLIPYSFVIDWFLDIGSVLERVDSGQRLLRHDIRFSTESRKEIIRKKVTPSATFPLSG DLSIKRYSRGTQDQCPVPPLTLSSTPTVTNHWLEASALIIQRQK" gene 1863..2363 /gene="Gerhypos.4_51_3" CDS 1863..2363 /gene="Gerhypos.4_51_3" /codon_start=1 /product="coat protein" /protein_id="DAD50206.1" /translation="MAKEIKPGYTDTPIEGVSALTFPRGLVNIKQDFRVKSNTGKEVV LTNITSPIDRPENIRLAYTEVANIYNGTGIEPSLFAPSKRGVSILAQITNTQSVTDST DAEFRTDQPMSAHLVIKAASSEYVTSEQVEALVGRLLSSLFDTGSTGRARLEAILRGS LVPSEL" gene 2481..4367 /gene="Gerhypos.4_51_4" CDS 2481..4367 /gene="Gerhypos.4_51_4" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50207.1" /translation="MRPSQTILVLEDLQKCFVGPVYRNRVELDSSDRATVTDVYQQWL LLMVDSGYLHHGTLLRDARRLLSDMMEADVLVLNNAFADLLHLVRCKTIKGFKALCSK ISSHLFSFIKQDVAKIEVGDIYAAKRLVQLFSYTSRLTLHNIDLTEQCLIDYMATEDG MSSYRPKSLLSSLNKIIKRWMLSFDPDRIHFQHGPGGVAGHGRIALEVKYKDLTYDRA LTSAFGHPWWSNQPIRSTLDRISHTIFVPKSYKTFRTISMESSTLQYCQQGILREIDR VVESSPYLRNHIGFHEQERNQSLARTGSIERNYATIDLSAASDSVSYQLVKDVFRGTK LLKYLCATRSRRTLLPDGRLIRLKKFAPMGSALCFPVETIIFAAVCQYVAREHGVTGD YSVFGDDIIVPTQCAQDVMLVLEILGFRVNREKSFFDPNCWFRESCGGEYCDGFDVTP MRVSRKYNHLQRDVHLTGLIDLSNEAFKRGFSNLRTFFLKKLRENHFRALFSPTSVNS VNYTNYHLKHRWNSDLHRIECRATSLAPDNGWTSFENTFERRDVEGMVWYQTLNFPRP PEDSDEEIRYRHWLASTHNRYSIGDGFVSETSRVIVSTKNRWRSKPFELSDQQFIDLN LTRE" ORIGIN 1 cgacccacca gtttcgctgg taagtcgttg taaatcgtaa gtttctcact tgcggttaga 61 tgggagagga gaaccagaac ccttgagaaa ggaggttcta ctatggatct cacaaaccca 121 ttactaactt ctgatactat tcagatgttg gtttcgagcg taacaggcca gggcaacgaa 181 aagttgtccg agctggaggc tgaaagactc ctaaatgcta ttgctcgtgt ccaagccggt 241 ataccgactg gagtccaaaa cccaaatagg actggaatgt agtcttcact acatgtatac 301 aagtgctcaa agaaactcga tttctagaaa ggatgaggta acctgattac gctacatttg 361 ccgtcgtctg actcgaagta ctacttgctt ttatccggtt ttctcgttgg gccaatttcg 421 ctcaacggat ctcggttggg ggattctatc ccttatagaa gcggcgtaga cttcttgcac 481 caaacacgga gtaagttcca cgaaaataat gtggaccatg tcgaggtaga agcggaatta 541 tcatatgttc cgtcgtatac cgactcttac cccgctgcct ctggactgga gcctactcgt 601 atcgggttcc gctgttttaa ttctagcggt tccaagacta cgatctatgc tccaagaggt 661 ctaggtgtag atggccaaat tgggatttac tataagacac attatattgt gtcgaatagt 721 gatccttata ctttttcagt tgtccaatat gacagacaag ctgaaaaggg tgccatgtgg 781 tcagcccaat tcggaatcat cgtttcaact tttacgtatc tcggtgtggt tagtaataag 841 ccacaatacc gacaaacgca acaagattgg acggtgaact ggaaggattt tgtatcgaca 901 tgggaggagt taactcctgc tattgtctta caagccgctt cctctccgag gggagacatc 961 aagacgctat cgacaaccac atatgcaatc tatactgctc aaacagcagc tagcttgtct 1021 gtggaaagcg tacgtcgtga tttgcgcatc caggaaattg atcatcttct cgacgtggaa 1081 tttccactcg aggatgttca ccctggtatc ctggctatga aggccgcaca aaagatgaat 1141 gctaatcaaa ctaatatgat tgcattcatt cgcgatcttc gaaaccctaa acaattgatt 1201 cctaagttga agaaacttga tcagcttaag actcatgcta gtaattatct agcttttgaa 1261 tacggggtgc ttccaacaat ttctgattta caagaaatta ttggatcgct taagaagatt 1321 aaaccttacg ttgatcgtaa tggcttttcg acttatagcg caggacatac tgattctctc 1381 tccattggta attacacctt tgaattagaa cagcatgtaa aagtagcggt cgatgataat 1441 gattctggac tatcgacggt cttgagaaac ctcgagtcgt caggatttgc tcccactttg 1501 caaaatattt gggacctaat tccgtacagt ttcgtcatcg attggtttct ggatattgga 1561 agcgttctag aacgcgttga ctcaggtcaa cgccttctta ggcatgatat tcgattctcg 1621 actgagtcga ggaaagagat catccgcaag aaggtaacac cttcagcgac ttttccttta 1681 tccggagatc tatcaatcaa aaggtactca cgggggacac aagatcagtg tccggtaccg 1741 cctcttaccc tttcgagcac accaactgtc actaaccact ggttagaggc gagtgcgttg 1801 attattcagc gccaaaaata gaaatcagcg ctttaaatgc tgaaagaaga ggagttgcca 1861 aaatggcaaa agaaatcaaa ccgggttata cagatacacc tatagaaggt gtttctgcat 1921 taacatttcc acgtggactt gttaatatta aacaagattt tcgtgtgaaa tcgaacacag 1981 gaaaggaagt tgttcttacg aacattacct ctcccattga tcgcccagaa aacatccgct 2041 tggcttatac cgaggtcgct aatatttata acggcactgg tatcgaacca tcgttattcg 2101 ctccctcaaa acgaggagtg agtatcttgg ctcagattac aaacacacag tctgtaactg 2161 attcaacgga tgctgaattt cgtaccgacc aaccaatgtc tgctcacctt gtaatcaagg 2221 ctgcttcttc agaatatgtt acttctgaac aagtcgaggc attagtcggt cgtctcctga 2281 gtagtctctt cgacactggc tctactggta gagcccgcct cgaagctatt ctaagagggt 2341 cattggttcc ttccgaactg tagtgcatgt agtgaaatac attaacgcat ttacctttgc 2401 atatgtagca acaatgttgc tactagcgac agtagtcgtc gtatatttac tcacacacac 2461 ttaggtagga ggagaactca atgcgcccaa gccagacaat ccttgtcctg gaagacctac 2521 aaaaatgttt tgtgggcccc gtatatagga atcgggtaga gcttgactct agcgaccggg 2581 caaccgtcac agatgtatac caacaatggt tacttctaat ggttgactca ggttacctac 2641 atcacggaac gttattaagg gatgcacgaa ggctcctatc agatatgatg gaagctgacg 2701 tgttagtact taataacgct tttgccgatc ttttacatct tgttagatgt aaaactatca 2761 aaggatttaa agccctctgt tcgaagatta gttcacactt gttttctttt attaaacaag 2821 atgttgctaa aattgaagtc ggcgatattt atgcagctaa gcggttggta caacttttta 2881 gttatactag tcgtttgact ttgcataata ttgatttgac tgaacagtgc ttgatagact 2941 atatggcgac agaagacgga atgtcttcat atcgtcctaa gtctctcctt tcatctctta 3001 acaaaattat taagagatgg atgttatctt ttgatcccga tcgtatccat tttcagcatg 3061 gcccaggagg cgtagctggt catggtcgga tcgcgttaga agttaagtat aaagacttaa 3121 cttatgatcg cgctcttact tcggccttcg gacacccctg gtggtctaat caaccgatta 3181 gatccacgct ggatcggatt tcccatacga tatttgttcc aaaaagttac aagactttta 3241 gaactatatc catggagtcg tctactttgc aatattgtca gcaaggtatt ctacgtgaaa 3301 tcgatcgggt tgttgagtct tctccttatc tacgaaacca tattggtttc catgagcagg 3361 aaaggaatca atcgttagca cggacaggtt caatagagcg taattatgcg actattgact 3421 tatctgctgc aagcgactcg gtaagctacc agttagttaa ggatgtcttc cgaggtacga 3481 agttgctcaa gtatttatgt gcaactcgat ctcgtcggac tcttttacct gacggccgac 3541 tcatccgctt aaagaagttt gccccaatgg gttcagcgtt atgcttccca gtggaaacaa 3601 tcatctttgc tgcggtttgt cagtatgtag ctcgtgagca cggcgtcacc ggggattatt 3661 ctgtcttcgg cgacgacatc atcgtaccta cgcaatgtgc gcaggatgtt atgcttgtac 3721 tcgaaatttt gggttttcgc gtaaatcgcg agaagtcctt tttcgatcct aactgctggt 3781 tccgcgaaag ttgcggaggc gagtattgtg atggattcga cgttactcct atgagggtaa 3841 gtcgtaagta caaccatctt caacgagatg ttcacttgac tggtcttatc gatctgtcga 3901 acgaagcttt taagagaggg ttctcgaatt tgagaacatt ctttctcaag aaattgagag 3961 agaatcactt tcgtgctttg ttcagtccaa ctagcgttaa tagtgttaac tacactaatt 4021 atcacttaaa acatcgttgg aattcagatc tccaccgtat cgagtgtcga gcaactagct 4081 tggcaccaga taacggatgg acttcatttg agaacacttt tgaaagacga gatgttgagg 4141 gaatggtttg gtaccaaact cttaattttc cccgtcctcc agaagattca gatgaagaga 4201 ttcgctatcg tcactggctc gcgtccacac acaatagata ttctattggt gatggatttg 4261 tttcagagac aagtcgcgtg atcgtgtcaa ccaagaatcg ttggcgttcg aagccgtttg 4321 agctgtctga tcaacagttc atcgatttga acctaacgag ggagtaaata gcttctccct 4381 ttaaatcaaa agctggatag gcttctgtga cctttatcac agaggtgctc tcgccttgcg 4441 agaccttatg ca //