LOCUS BK013835 4016 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.4_54 genomic sequence. ACCESSION BK013835 VERSION BK013835.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.4_54 ORGANISM ssRNA phage Gerhypos.4_54 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Bahnicevirus; Bahnicevirus tellurenecus. REFERENCE 1 (bases 1 to 4016) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4016) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN034306 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4016 /organism="ssRNA phage Gerhypos.4_54" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786358" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Bahnicevirus; Bahnicevirus Gerhypos.4_54" gene 155..1486 /gene="Gerhypos.4_54_1" CDS 155..1486 /gene="Gerhypos.4_54_1" /codon_start=1 /product="maturation protein" /protein_id="DAD51494.1" /translation="MGGYLTQRRYIPQKIRCSIYWASNGVLYDFGQVIPLLQETYSYR SELVAGESPTDGIVLEDGSQASGLAILKNAMDNNNFITPFDNGHEFVTTKQYPVQLSH EGKHLDSGAPFHDVVYRKVDLIPSRGHHGVMPPIDLNVYGTQAIHATLPAQPQVSISS ILAQFKSHQELPGFIFTRMQAQTERFISLGARTTLNVEYGIRPFLKDVEDLLNVVRTV NKAIKQFQRDGHNGRTVRRTWALPEFDTDIISDQTISEEPSLGPYFQGYFGSAVLVSH GNTQSYTRKVHRKIRFSAEYQYTLPDDKSWNGRMDNALRNAEQLLGLGVTLETVWQLT PWTWLSDWFVDIGPILGNASALGRNGLIIRYAYIMCNSLMEEVYSSGDSTFRGNYNPG TVYANFLTRRKERRKASPFGFGLTPGDFSPEQWLILAALGITNGPSKLRVR" gene 1570..1932 /gene="Gerhypos.4_54_2" CDS 1570..1932 /gene="Gerhypos.4_54_2" /codon_start=1 /product="coat protein" /protein_id="DAD51495.1" /translation="MAFSDPQSIDPGTGAVSLPRTSSGANTGTFTSADGSLVLTVASI LGKRTRRTARITLNKIVTDPYVTDRNVPVSASFYVVLDTPSVGFTAAEMKSAVIGLAT WLTASSGAKTAQLVGGEN" gene 2102..3949 /gene="Gerhypos.4_54_3" CDS 2102..3949 /gene="Gerhypos.4_54_3" /codon_start=1 /transl_except=(pos:2102..2104,aa:Met) /product="RNA-directed RNA polymerase" /protein_id="DAD51496.1" /translation="MKSLMLFLQSVLTDVGTLCCVSTSRDLETITARVKHEGLSFLTI TLPSYGKDFERSLDLGYVADEMFLGFKTYEASGLPRLFEGFLQQVFDFGTGRLLDEPS IDAIFAVRQLTLLFGKIELECSDERKRAAIDSYVECEKDMDALLWGLSDAQLRDFRRV SELLWRDIFTDLEHMLEACEVVARFSGGSTADKLSGNRKYDGINSWPERAQSIFPWEE NLYNTVVSARADRPRAFSHLSVGDRSMHILEPGTETPVKVVLVPKTMKTPRVIAMEPT CMQFMQQGLLRAFSQVVQANDSARALVGWQSQEPNRSLARSASHTGKLATLDLSEASD RVSNLLVIKMFGPYRLLAEAVQAVRSNTADVPGYGVLRLAKYASMGSALTFPLESLVF MTIVFLGIEQELNRPLSKAAVKRLLHQVRTFGDDIIVPTRYTRSVIGSLEAYGLKVNT RKSFWTGKFRESCGGDYYDGEDVTVTRCRALFPTSRSQVPELVSTVALRNLLYKAGLW NAVRFLDEKLEGLIPFPAVEETSSVLGKFSFLGYSTDGWNPDLQRPFVRGAVLRPVLP TSRLDGYGALLKFFLTRGDSDIASEVEMDLEHGGRPVVVDIKLRKACPF" ORIGIN 1 gcccattaag gcccaccccg gtgcttttaa acgcatcacg tgactgcagc tctgtatttt 61 gggttgcgac ttcgtatctc tgatgttgta tgcagtgcat ccaacaacat cgacatggaa 121 ctttcatgtc acaactaact gaaaggaatg tttcatggga ggttacttaa ctcaacggcg 181 gtatataccg cagaagattc gttgctcgat ttactgggct tcgaacggag tcctttatga 241 cttcggtcaa gtaattcctc tgttgcagga aacttactca tataggagtg agttggttgc 301 tggggagtca cctactgatg gaatcgtctt agaagacggt tcccaagcaa gtggcttggc 361 tattctaaag aatgccatgg ataataataa ctttatcaca ccctttgata acggacacga 421 attcgtaact acgaagcaat acccagtcca gctttcccat gagggaaagc atttagactc 481 gggtgctccg tttcacgatg ttgtgtatag gaaagtcgat ttgatcccct caaggggtca 541 tcatggcgta atgccaccaa tcgaccttaa cgtatatggc acacaagcca tacacgccac 601 gttaccagcg caaccccagg tatccatctc ttctatcctc gcccagttta aatcgcacca 661 ggagttacct ggtttcattt ttactaggat gcaagctcag actgagcggt tcatctcctt 721 aggagccaga accactctaa acgtcgagta tggcattcgg ccctttttaa aggacgtcga 781 ggatttgctg aatgttgttc ggaccgtcaa taaggcgatt aaacaatttc agcgagatgg 841 tcacaacgga cgaactgtcc gtcgcacctg ggccttaccc gagttcgaca cagacatcat 901 cagtgatcaa acgatctctg aggagccctc cttaggccct tattttcagg gttactttgg 961 gagtgcagtc cttgtctcac acggaaacac gcaatcgtac acgcggaaag tgcatcgtaa 1021 gatacgcttc tcggcagaat accagtatac tcttccggat gataagtcct ggaatggtag 1081 aatggataat gccctgcgaa atgcagagca gcttctgggt ctcggggtta cccttgagac 1141 cgtgtggcaa ttgacgccat ggacatggct tagcgactgg ttcgtcgaca tcggccccat 1201 tttggggaac gcgtcggcgc ttggtcgcaa tggcctaata attcgctatg cctacatcat 1261 gtgcaactcg ctcatggagg aggtatacag ttcgggtgat agcaccttta gaggtaacta 1321 taatcccgga actgtctacg ccaactttct cacaaggaga aaggaacggc gtaaagcgtc 1381 acctttcgga tttggcctaa cgcccgggga tttctctccc gagcagtggc ttatcctggc 1441 agcccttggt atcactaatg ggccgtccaa actacgtgtg cgatagttgt atcaacgcat 1501 gcgcggtgtt cgaacagctg cctggctggc tcgagcttaa cattcaataa gaaagtcaag 1561 gacaatgcca tggcatttag tgatcctcag tcaattgatc caggaactgg agctgtttcg 1621 cttccgcgaa ccagctccgg tgctaacacc ggcaccttta caagcgctga tggtagcctg 1681 gtactaaccg ttgcttctat cctcggaaag aggacgcggc gtaccgcccg tatcacactg 1741 aacaaaatcg tcacggatcc gtacgttact gatcgtaacg tacccgtctc ggcctcgttc 1801 tatgtggtcc tggacacccc ctcggtcggc tttacagccg ccgagatgaa gtcggcagtt 1861 attggtcttg cgacctggct aactgcttca tcgggtgcga aaacggcaca actcgttggt 1921 ggagaaaatt aactctctcc tccgctgacg gagccgtatt cacaattgac cttttctaag 1981 agggaaaccc ttagagaggt aggggggcgg tccgcgcctt agttagcgcg gactgccttc 2041 tgatatacag atcacaacac cgtggctatg gatcttgtca actctatttt aaggagcgca 2101 agtgaaaagc ctgatgttgt tcttgcagtc agtcctcaca gatgtgggga ctttatgttg 2161 tgttagcacc agtcgtgatc ttgaaacaat cacggctcga gtcaaacatg aagggttatc 2221 gtttttaacg ataaccttac ctagttacgg aaaggacttc gaaagaagtc tcgaccttgg 2281 ctacgtagct gacgagatgt tcttaggttt taaaacctat gaagcatccg ggctccctcg 2341 tttattcgaa ggtttccttc agcaagtgtt tgactttggt actggccgat tactcgacga 2401 accgtcgatt gatgcaattt ttgctgtacg tcagctaacg ctgttgttcg gcaaaatcga 2461 actcgagtgc tcagatgagc gcaagagggc ggcaatcgat agttatgttg agtgtgagaa 2521 ggatatggat gccctgctct ggggactttc cgatgcgcaa ttgcgcgatt ttaggagagt 2581 cagcgagctc ttgtggcgtg atatctttac agatctagag catatgctcg aagcctgtga 2641 agtcgtcgca agatttagtg gcgggtcaac tgccgacaag ctttctggaa acagaaagta 2701 tgacggtatt aatagttggc ctgagcgtgc acagtctatc ttcccttggg aagaaaacct 2761 gtacaacact gtggtatcag cgagagctga ccgcccacga gcgttctccc acctttcggt 2821 gggtgaccgt tccatgcata tcctcgaacc cgggaccgag actcctgtca aggtggtttt 2881 ggtccctaaa actatgaaga cacctagagt tatcgctatg gagcctactt gcatgcagtt 2941 catgcagcaa gggctcttac gcgctttctc tcaagttgta caggcgaatg actccgcccg 3001 tgctcttgtc ggttggcaga gccaagaacc taataggtcc ttagctcggt ctgcttccca 3061 tactggaaag ctagctacac tcgatttgag tgaagcatcc gatcgtgtct ccaatctgct 3121 agttattaaa atgttcggcc cttaccgcct ccttgcagag gctgtgcagg ctgttcgttc 3181 taacactgca gacgtgcctg gctatggtgt tttacgcctc gccaagtacg cgtctatggg 3241 ttcagctctt actttccccc ttgagagtct cgtctttatg acgattgtct ttctaggaat 3301 cgagcaagag cttaatcggc ccctgtcgaa ggccgctgtt aagcggttac ttcaccaggt 3361 gcgcacgttt ggggacgata taattgtccc tacacgttat acacgttccg tgataggatc 3421 actggaggct tatggcctta aggtgaacac tcgcaagtca ttctggactg gaaagttcag 3481 ggagtcttgc ggtggggatt actacgatgg cgaggacgtt acagtcactc gttgtcgtgc 3541 gctttttccc acgtcgcgga gccaagttcc cgagttagtt tcaacggtag ctctccggaa 3601 tctgctatat aaggcaggtt tatggaatgc tgtccgtttc cttgacgaga aactggaggg 3661 gttaattccc tttccagctg tcgaggagac tagctcggtg ttaggcaagt tctcattctt 3721 aggttattcg accgacggat ggaaccccga tttacaacgt ccctttgtca ggggtgctgt 3781 tttgagacct gttcttccaa cttcacggtt ggatggatat ggtgccttgc tgaagttctt 3841 cctcacaagg ggcgatagtg atatcgcctc cgaagtggag atggaccttg aacatggtgg 3901 acgcccggta gtcgtcgaca taaaactccg gaaggcctgt cctttttaag gaacagggtg 3961 gcttaaatgc cacgtgtgga gactagaagt ctcttctgag acttctggtt tcagga //