LOCUS BK013553 3916 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.4_57 genomic sequence. ACCESSION BK013553 VERSION BK013553.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.4_57 ORGANISM ssRNA phage Gerhypos.4_57 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Pujohnavirus; Pujohnavirus geoadaptatum. REFERENCE 1 (bases 1 to 3916) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3916) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-3916 MN035357.1 1-3916 FEATURES Location/Qualifiers source 1..3916 /organism="ssRNA phage Gerhypos.4_57" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786361" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Pujohnavirus; Pujohnavirus Gerhypos.4_57" gene 93..1178 /gene="Gerhypos.4_57_1" CDS 93..1178 /gene="Gerhypos.4_57_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50538.1" /translation="MPGRTRMSNSVVFKNFGGRFGSTIGGGSVWSGNHSCSDVIGSGD NAPLNVFHETVDGGRLNKPNVGFFSSWFTNYRVDMLDTGNCFDHLGLVDDIFNVDAAT QAAARTNPSRPYVDVVTNALQLGELFHLIRDSGRNFFRSIGNNNLMNEFGIKPLVGDL AKMLRFTDQVNHRVGEIQRLRSQHGLRRTCGILSTSNSAKVNKFIQTQNFTLREDFDV VTSLTIKAHCRWLPAGDCASLARPDAARALAQRAVLGLTVDSSTLWELIPWSWLIDWG TNIGQYFTAHRNIIPATLSDVAIMRHTRTVAEWGGKAQDDWSCTGIRYTRENKTRATS FVAPTAHIPFLSGEQMGIVASLAVTRL" gene 1219..1590 /gene="Gerhypos.4_57_2" CDS 1219..1590 /gene="Gerhypos.4_57_2" /codon_start=1 /product="coat protein" /protein_id="DAD50539.1" /translation="MFADPQTLTVNAVAKALVRINQDEYSSEYLLRTTTNEFRLKIRN TSYRDKARNVMIDRHNVEFTETVFPVAPATLSTVRKTYVVIENQQGDTLADPTYDAAA LLSWLTASTNANITKLMNFES" gene 1655..3670 /gene="Gerhypos.4_57_3" CDS 1655..3670 /gene="Gerhypos.4_57_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50540.1" /translation="MKSQESVLLHVVQGICKDVRAAYPAIEGLDLDLERLTLYCQTRG LSLFTLDLPSLDSLLLQGLESGRLLLEGPLSHAVSKRVQVPRLFSGLWLRVFDRHACL RQDADPTSIFFLRQLCCLGKKLEVECSKDRINAVLENYHVVERSIRQPTLQWTFDELD PDDRLDSVHFVQALDGPSHNPRQLQLFEKREEAEGRGEVDRNLLRQVQQVADLVVSTF DLCDPVGRAAQLESEGLGTGFKHGPGAVSERLKNWEKSHFPYWSDKLEYLFPFDLCGK TAGDVRDRPVNHEMASRLICVPKTAKGPRLIAAEPTSQQWCQQAVLSFMVEQFGKHFR GSFIDLRSQHKSGDLVLKASRDRSLATVDLSDASDRLSCWTVERALRRFPSLLHYLHA ARTRLLRDDISQEPSFLKLKKFASQGTATTFPVQSLVFLIIALAATVEGKPSWRKFWK LSDQVRVFGDDIILPTHGYERLIRIMELLQLKVNIAKSYAHGHFRESCGVDGYRGYDV TPVKPKTLIADSPASCQAVVDTSNNLFNKGLWYASDSLTNTLPPRIRRGLRVVARHGT GFSGLASYSGSDESHLAKRWNSRLHRYEVRVWILRGPTRTETTGGFHSLLDFFASKHN NEHARIVSEHCGIRKTRDGFLWEPHNSDARMSVGRPVLHGAHRRRDS" ORIGIN 1 ggatagcgtt cgtgctatcc tcacaggact ctcacatcgg ccaagtaggc cgagactgag 61 attcctttcc ctcttaacgt aggagaagtc ccatgcctgg tagaactcga atgtctaact 121 ccgtcgtttt caaaaacttc ggaggtagat tcggttctac tattggaggt ggaagcgttt 181 ggagtggcaa tcattcctgt tccgatgtta tcggttcggg agataatgca cctttgaacg 241 ttttccatga aacagtagac ggaggaagac tcaacaaacc aaatgttggg ttcttctctt 301 cctggtttac caactatcgt gttgatatgt tggataccgg gaactgtttt gaccatttgg 361 gactcgtcga tgacatattc aacgtcgatg ctgccactca ggcagcggca cgaactaatc 421 cctcacgtcc ttacgtggac gtagtgacta acgcgttgca gttgggtgag ttgtttcatc 481 tgatacgtga ttccgggaga aatttcttcc ggagtatcgg aaataacaac ttgatgaacg 541 aatttgggat taaaccctta gtcggtgatc tagcaaagat gcttcgtttt acagaccagg 601 ttaatcaccg ggtcggtgag attcagcgtc ttcgctccca acatggactt cgacggactt 661 gcggcatcct tagcacatca aattctgcta aagtgaataa gtttattcaa acgcagaact 721 tcacacttcg tgaagatttt gatgttgtta ctagtttgac tatcaaagct cattgccggt 781 ggttaccggc tggagactgc gctagtttgg ctagaccaga tgctgcgcgt gctttagctc 841 aacgtgcggt cttaggtctc actgtagatt cttctacatt gtgggaactg attccgtgga 901 gttggctaat agactggggt accaacattg ggcagtattt tactgcacat cgtaatatta 961 tcccagcgac gctaagtgat gttgccatca tgaggcacac gcggactgta gctgagtggg 1021 gcggtaaggc gcaagacgat tggtcttgta ccggaattcg ctacactcgt gagaataaaa 1081 ctcgagctac gtcttttgtt gctcctactg cccatatccc gttcctttcg ggagagcaaa 1141 tgggtattgt agcttcgtta gcagtgacga ggctgtaatg ccttttcact gtaaatcgaa 1201 gactacaagg agtataacat gttcgcagat cctcaaacgc tcaccgtcaa tgcggtggcc 1261 aaagctcttg tccgaatcaa tcaggatgag tactcttccg agtaccttct cagaacgacg 1321 acgaacgagt ttcggctgaa gatccggaac accagttatc gggataaagc tcgcaatgtg 1381 atgattgatc gtcacaatgt tgagtttacc gaaactgtgt ttccggtggc gcccgcgact 1441 ttgtcgaccg taaggaagac atacgtcgta atcgaaaatc agcagggtga tacccttgct 1501 gacccgactt acgatgccgc ggcattgttg tcttggttga cagcgtcaac caatgccaac 1561 atcaccaagt tgatgaactt cgagagttaa ggaactcgaa gtgaccggtt actttctgcg 1621 acttggaata caatgctact gaaaggtaac atgtatgaaa agccaagaaa gtgttctact 1681 ccatgtcgtg caaggcatct gtaaagatgt ccgagcagca taccctgcta tagagggtct 1741 ggatctcgat cttgagagac tcacccttta ttgtcagaca cgtggtctaa gtttgtttac 1801 tttagacctt ccatctctcg attccctttt acttcaggga cttgagagtg ggcgcctctt 1861 gctcgaagga ccgctttcac atgcggtatc taagagggta caggtgccga gacttttctc 1921 gggactctgg ctgcgcgtgt ttgacaggca tgcatgtttg cgtcaggatg ccgacccgac 1981 tagcatattc tttcttcgac agctttgctg tcttgggaag aagctagaag tggagtgctc 2041 taaagaccgc attaacgcgg ttttggagaa ttaccatgtg gtcgaacgat ccatcagaca 2101 acccactttg cagtggacgt ttgatgaatt ggatcccgat gatcgcctcg acagtgtaca 2161 ctttgtacaa gctctcgatg gcccttccca taatcctaga cagcttcaac tctttgagaa 2221 aagagaagaa gccgaaggaa gaggagaagt agatcggaat ctcctacggc aggttcagca 2281 agtggctgac cttgtcgtca gtacttttga cctctgtgat ccagttgggc gagctgccca 2341 gttggaatct gaaggtcttg gtactggatt caaacatgga cctggtgctg tttccgaacg 2401 attaaagaat tgggagaaat cccacttccc atattggtcg gataagctcg aatacctctt 2461 tcctttcgat ctctgcggca aaaccgcggg ggacgttagg gatcgtcctg ttaaccatga 2521 aatggctagc agattgattt gtgttcctaa gaccgctaaa ggtcctaggc tcattgctgc 2581 agagcctaca tcacaacagt ggtgtcagca agcagttctg agttttatgg ttgagcaatt 2641 tgggaaacac tttcgtggat cctttattga tctccgtagt caacataaat caggcgatct 2701 ggtattgaaa gcttcacgag ataggtcttt ggctaccgtt gatttatcgg atgccagtga 2761 ccgtctttcg tgttggaccg tggaacgcgc actgagaaga tttccttctc ttttgcatta 2821 tctgcacgcc gcacggacga ggctcttgag agacgatatt tctcaggaac cgagcttctt 2881 aaaacttaag aagttcgcct cgcagggaac agcaacaact tttccagtcc aatctttagt 2941 cttcttgatc atagctttgg ctgctacagt cgaaggtaaa ccaagttggc gtaagttctg 3001 gaagttgtca gaccaggttc gtgtgtttgg cgatgatata atattgccga cacacgggta 3061 tgagcgattg atccgcataa tggaattgct tcagttgaaa gtgaatatag ccaaaagcta 3121 cgctcacgga cactttcgcg agtcctgcgg agtcgatggg taccgaggtt acgatgtaac 3181 tccggttaaa ccaaagactt taatcgccga cagcccggct tcgtgtcagg ctgttgtaga 3241 cacatccaac aatctcttta ataaaggatt atggtatgca tcagacagcc tcacaaacac 3301 cttacctcca cgtattcgac gtggactgcg ggttgtggct cgacacggaa ctgggttcag 3361 tggtctcgcc tcgtattctg gaagcgatga atctcatctt gctaaaagat ggaattctcg 3421 ccttcatagg tacgaagtca gagtttggat cttacgtggt ccaactcgaa cagagacgac 3481 tggaggattc cacagcttgc tggacttctt tgccagcaag cacaataatg agcatgctcg 3541 gattgtctct gagcattgtg gaatccggaa aaccagagat ggttttctat gggagcccca 3601 taacagtgac gctcgcatgt ctgttggccg accggtcctt catggagcac accgacgaag 3661 agattcgtag gttgcttcca tgggctaatg ttgtccaact cccatcttgg gggttgtgct 3721 ccattggctg tagggactta ttcggacaga cagtccatgc agatgagtat cacgaggcga 3781 gagcctactt gtaggacatt ggtctatgta gaccacgtgt ctacatagtc ctctcatcta 3841 cttgtgttat gggtgtatgg gtttaatctt tgctccacag aaatgtgggg ctcagagcaa 3901 ctctgggaag tgcact //