LOCUS BK013564 3800 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.4_59 genomic sequence, sequence. ACCESSION BK013564 VERSION BK013564.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.4_59 ORGANISM ssRNA phage Gerhypos.4_59 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Rainacovirus; Rainacovirus tellurivivens. REFERENCE 1 (bases 1 to 3800) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3800) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN035640.1 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3800 /organism="ssRNA phage Gerhypos.4_59" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786363" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Rainacovirus; Rainacovirus Gerhypos.4_59" gene <1..1302 /gene="Gerhypos.4_59_1" CDS <1..1302 /gene="Gerhypos.4_59_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50576.1" /translation="LRRAPFGCLPSKTLRGPVMGQSYPQTISRLRKWSFDAPQYTFVP FDGHVPPFCQAPHSGSGSPLVLTATEVVTRGASPAAWKFLIQAGLQAGSVLSGTGYKL VPGSGGYNYQGSGPNACFQGSVSGINHVAGFPIPNSTPSSLADSLAREQLLGRYLSAT KSWRGGNFLAEFRETVHMLRHPIQSLGVSTTHFVRGVHGIKHLAFSHPREYAKRLGNL WLAWSFGWKPLFDDIKDANTAIHKLASGTGHDTIKLTGNGSEASTASYSFSNASSPIS VYAAYASYIKTVREVRYIAAFRARPESFGTVADTFGVDPYDLVPAVWEAIPWSFFIDY FLNVQGVIDSWRYASSNFAWGIRGTKSTVTRVFSDWYVANVPVNTSTNVAVSGSEASV TLKGRTLITSPPYVGFRFRVPGPGFTQVGEYQRAYCSDCGF" gene 1360..1830 /gene="Gerhypos.4_59_2" CDS 1360..1830 /gene="Gerhypos.4_59_2" /codon_start=1 /product="coat protein" /protein_id="DAD50577.1" /translation="MSITWASPITGSAQTGLTSPTYTTTSDTAPPGNPGKQVAVTALG GTQTGVTPHSVASPFTLNFTRPASLKVLGVPNPVTGVITLIPTNTYKLITRKGVLPLA GQAFKVMNISTELDVPAGADTADPQNIRAALSAHIGSLTQQSAGLGDLLINGVL" gene 1830..2039 /gene="Gerhypos.4_59_3" CDS 1830..2039 /gene="Gerhypos.4_59_3" /codon_start=1 /product="hypothetical protein" /protein_id="DAD50578.1" /translation="MDITFDLETLLTSLEFRKKLNESLESQNLALRIAILTPTGLVLG ETPYISPFDGEDTGVGHVDWDRRAE" gene 2099..>3800 /gene="Gerhypos.4_59_4" CDS 2099..>3800 /gene="Gerhypos.4_59_4" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50579.1" /translation="MRINADVLYSNLLVDLGDVVDPALPSWAVDSTSKQVACYLLRDT LLKKFNEEEKPSPNACLAAFKKFTAVNDKCAEWSLVLDRTSDEELINSVKMELYRFWY VGGDSPLISDLREVYLEGRAGPGASISARGQDFYTKMFDSPLSSTRGLPEIWERCVSM GGLSFEAEASRLLNHGYDVVESSRYSFVNKTTAVARGICTEPTINMWFQLGIGRMLER RLGSFYGIWLDTQPNRNRELARAGSIDGTVCTIDLESASDSLGLKMLREMLPRSWMAL LEMFRCPSTILPTGSVLDLNMVSTMGNGFTFPMQTILFSAVVKGVAKRLGVKTDSSNF GVFGDDIICPSSIYRTVKRVLTILGFVVNSDKTFVEGPFRESCGADYHLGMNVRGVYI KKLLTLQDLFVAINNLNRWSAKTGVFLNRSVCYLASFLRHGYPVPLDENDDAGIHTPL YFTRNLRRNKVGSIGYKARAPSEYAFYILGDVIWTFRDQVRRNYNPAGLYISLLFGGI RGYRVLLRQRRVLYVTKRRSTPRWDWLPPRPLEGLHGPQGYRRLVDAWYWNLLGSSFG T" ORIGIN 1 cttcgccgag ccccttttgg gtgtctccca tcaaaaacac tgagaggtcc cgttatgggt 61 caatcttacc cccagacaat ttctcgtctg cgtaagtggt cctttgacgc acctcagtat 121 acgtttgtgc cctttgatgg gcacgtgcca ccgttctgtc aggccccaca ctccgggtct 181 ggcagtccgc tggtattaac ggctaccgag gttgtgacac gtggtgcctc gcctgccgca 241 tggaagtttc ttatccaggc gggtcttcag gcgggttctg tgctgtcagg aactggttat 301 aagcttgttc ccggttctgg tgggtataat taccagggct cgggtcctaa tgcttgtttc 361 caggggagtg ttagtggtat taaccacgtt gcgggatttc ctatccctaa ctctactccc 421 tcctctctcg cggactcgtt agcccgcgaa cagctattgg gtcgatatct ctcagccact 481 aagtcgtggc gtggaggtaa ttttcttgcg gagttccgtg agacggtcca tatgcttcgc 541 catcccattc agtccttagg cgtgtccacc actcatttcg ttcgtggtgt tcatgggatt 601 aagcatttag ctttctctca cccgcgtgaa tacgcgaagc gcttagggaa cctatggttg 661 gcttggtcat tcggttggaa accgctcttt gacgacataa aagacgctaa cacagcgatt 721 cataagctgg ctagcggcac tgggcatgat accataaagt taactggaaa tgggtctgag 781 gcttcgacag cctcgtactc cttcagtaac gcctcctcgc ctatctctgt atatgctgct 841 tatgcatcat atattaagac ggttagggag gtcaggtaca ttgctgcttt tcgtgcgcga 901 ccggaatcgt ttgggactgt tgccgatact ttcggtgttg atccctacga tttagttcct 961 gctgtttggg aagctattcc ctggtcgttc tttatcgatt acttccttaa tgttcaggga 1021 gttatcgact cctggcgata tgcctcctct aatttcgcat ggggaattcg cggtacaaaa 1081 agtaccgtga cccgtgtgtt ttcggattgg tatgttgcca acgtgcccgt taatacgtcc 1141 actaacgtgg ctgtaagcgg gagtgaggcg agcgtgactc tgaaaggacg aacgctgata 1201 acgtcgcctc catatgttgg gttccggttt cgcgtgccgg ggcctgggtt cactcaagtg 1261 ggtgaatacc agcgcgctta ttgctcagat tgcggcttct aaaccgcagc atgggcgtta 1321 gcagctcaat tcctttgatt ctactaacca aggaacccaa tgtccatcac atgggcatcg 1381 ccaattactg ggtctgcaca gacgggctta acaagtccga cttacacgac aaccagtgac 1441 accgcccctc cgggaaatcc gggaaagcag gtggctgtaa cagcgttggg tggcacacag 1501 actggcgtaa ctccccattc tgtggcttct ccattcaccc ttaatttcac tcgaccggcg 1561 tccctcaaag ttcttggggt accgaatcct gtgacgggtg ttattacgct catccctacc 1621 aacacgtata agctgatcac ccgcaagggt gttctgcctc tagcaggtca ggcgttcaaa 1681 gttatgaaca tttcgaccga actagacgtg ccggctgggg ccgatacggc agatccgcag 1741 aatattcgtg cggctctttc tgctcatatt ggctccctta ctcagcaatc tgctgggctg 1801 ggggatttgc tcatcaatgg tgtcctataa tggacatcac ttttgatctt gagacgttgc 1861 ttacttcgct tgagtttcgt aagaagctca acgagtcgct tgagagccag aatcttgccc 1921 tgcgtatcgc tatccttact ccgactggtc tggtattagg ggaaaccccg tatattagtc 1981 cattcgatgg tgaggatacc ggcgttgggc atgttgactg ggataggcgc gccgagtagt 2041 tctcgacggc ttctcaatcc tcgaaagagg tgacgtttcg tagcgtagga gatccaccat 2101 gcgtattaac gctgatgttc tttactccaa tctacttgtc gatcttggtg acgtcgtcga 2161 cccggcatta cctagctggg ccgttgattc aacttctaaa caggtagctt gctatctgtt 2221 gagggatacc ctcctgaaaa agtttaatga ggaggagaag cccagtccaa atgcatgtct 2281 tgcagctttc aagaaattta cggctgtcaa cgacaagtgt gcggaatggt ctctcgtgtt 2341 ggatcgtacg tcggatgaag agcttataaa ctccgtgaaa atggaacttt ataggttctg 2401 gtacgtcggg ggagattctc ccctcatctc agaccttagg gaagtttacc ttgagggtag 2461 agccggaccc ggtgctagta tatcagctcg tggtcaggat ttctacacta agatgttcga 2521 cagtccatta tcatccacaa gagggctccc ggagatttgg gagcgttgtg tctcgatggg 2581 cggccttagt tttgaggctg aagcctccag gctgttgaac cacggatacg acgtagtaga 2641 gtcaagtcgt tatagcttcg ttaataaaac gacagctgta gcccgcggta tctgtaccga 2701 acccacgatt aatatgtggt tccaactcgg tataggtagg atgcttgaac gtcgtttggg 2761 cagcttttac ggtatttggt tagatactca gccaaaccgt aaccgtgagc tagcacgcgc 2821 aggttctatt gatggcacgg tatgtaccat cgatttggag tctgcgtctg actctttggg 2881 gctcaaaatg ctccgtgaga tgctacccag atcttggatg gctcttttgg agatgtttcg 2941 atgcccctcg acgatcctcc caacagggag tgtgctggat ctgaatatgg tcagtacaat 3001 gggcaacggg tttactttcc cgatgcaaac catactcttt tccgcggttg taaaaggagt 3061 tgctaaacgt ctcggtgtaa aaactgattc gtctaacttc ggcgtatttg gcgacgacat 3121 tatttgtccg agctcgatat accgcacggt taagcgggta ctaacgatac ttggctttgt 3181 cgtgaactcc gataagacct ttgttgaagg tccgtttcgg gaatcttgcg gtgccgatta 3241 tcatctcggc atgaatgtca ggggagtgta tattaaaaag ctcctcacac tgcaagacct 3301 gtttgtcgcc atcaacaatc taaacagatg gtctgctaag accggtgttt ttcttaaccg 3361 gtctgtatgc tatctcgctt catttttgcg acacggttat cccgtgcctc ttgatgagaa 3421 cgatgatgca ggcatccata cacctttata ttttacgcgg aatttgcgta gaaataaggt 3481 gggctctatt ggctacaaag ccagagcccc aagtgagtac gccttttata ttctaggcga 3541 tgtcatttgg acgtttagag atcaggtacg acgaaattat aaccctgctg ggttgtatat 3601 aagtctcctg tttggcggta taaggggata tagggttctt cttaggcaaa gaagggtcct 3661 ttacgttacg aagcgcagat caaccccgcg atgggattgg ctgcctcccc gcccccttga 3721 gggtcttcat ggccctcagg gatacaggcg tctcgttgac gcctggtact ggaatctttt 3781 aggttccagt tttgggacag //