LOCUS BK013424 4024 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.4_64 genomic sequence. ACCESSION BK013424 VERSION BK013424.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.4_64 ORGANISM ssRNA phage Gerhypos.4_64 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Huhbevirus; Huhbevirus chthonovivens. REFERENCE 1 (bases 1 to 4024) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4024) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-4024 MN033061.1 1-4024 FEATURES Location/Qualifiers source 1..4024 /organism="ssRNA phage Gerhypos.4_64" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786369" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Huhbevirus; Huhbevirus Gerhypos.4_64" gene <1..1249 /gene="Gerhypos.4_64_1" CDS <1..1249 /gene="Gerhypos.4_64_1" /codon_start=2 /product="maturation protein" /protein_id="DAD50075.1" /translation="TRGPHVLRNTPNQRRVNLIMPDRYRETSALIGTFTDVYTGVKSP ASSVITRRWSNLIDGAGGHYGYPNFPSDRDVGGKFTLHFSETQSFPQYLGEIQGYGPY SNISYKGSWMATLPLYGDPGFYWDGNSFGHAAVAYDKMKPDHPNMNLLNAIYELKDVP EMLRQRFQKNGLASLGSYYLGLKFGWEPLLKDVRDFVLTHLNAQKTLKQLIRDEGKPV RRRITLESASRDPVENSGPGAGPTEPLFNSYMYDGTHSQFAYRELITSKTWASAQFRY WLPPGPRDVEWKARMLAAIFGLKPTPSSVYKAIPWSWLVDWFSNVGHVISNLDTSLVD RLAADYFYVMRQDGVTRSRTSTLGFFTKGSLAPFTATSLATSFSGTKTRIKGDPFGFG TPQNSLSGVQLSILGALGLSRIR" gene 1307..1660 /gene="Gerhypos.4_64_2" CDS 1307..1660 /gene="Gerhypos.4_64_2" /codon_start=1 /transl_except=(pos:1307..1309,aa:Met) /product="coat protein" /protein_id="DAD50076.1" /translation="MLADPQSVTINGVATSLPRTQQGPTQNVYTSSDGKTVMTTKQNI TSARFRREVRLAQTKIAADPISAVNKESGFSAYLVIDEPRNGVFTDTEIGYVIDALKA WLSSANYAKVLGGEF" gene 1808..3958 /gene="Gerhypos.4_64_3" CDS 1808..3958 /gene="Gerhypos.4_64_3" /codon_start=1 /transl_except=(pos:1808..1810,aa:Met) /product="RNA-directed RNA polymerase" /protein_id="DAD50077.1" /translation="MKRPTMLVQAILRQLSLDLDLSVERDLQRVADRFEHEGLSFFTI TLPQLSDALERGLEAGTFTCPSAFARHGRLPRFLGGFFKRVFDKDGRLLNEPCPFTIA GIRQVCRFFKKLKLPCSPRRNAKAIRHFIEVEGELRAMTSQVERKDIILDKISGILWS QDFPELSYLDLVCHHGPGVTADRYASNQRYRITKWNHRSEYSFPSDLHCYPNYGIAAE VGGTGEGTGCRTGVEYLELKDENPVRVVFVPKTQTAPRVIAIEPSHVQYMQQSVKDFL YTTLETHALTRHSIRFTRQDVNQRLAYQASKDRRLATLDLKDASDRVHLHLVQRIFKT SGLLEYLEDARSLHAVLPNGTNIVLFKYASMGSALCFPVEAMVFYTLIQSAMHILDGG RPSSRSISRYSKLIDIYGDDIIVPVEYADFVVKYLESYALKVNVNKSFKDSSFRESCG ADFFAGVPVNPVYARMLPHDSSQRWDASTIMSWNATADLFYQRGQWHVAQVIRDLLRR VVKRTIPRARKPGSGLSHLSFLFDTHCHYDKELQGWKQKRIVFDPVKRKDQIDGDEIA CLNKWGISSYRRDSFGNEGVGNSFKRRPTWLYVGGSRPQVRKSRTDMGRECIPVDASV SNERVCSVQDRLYEHGNSSRVLPDLAELCDTSCCGSREGEPSSSTGSFGSFVEEWWPD PLSHLTDDKTGLDFLTSTKRGSFKSKCRWISLVS" ORIGIN 1 cacccgggga ccccacgttc tacggaacac tccaaaccaa aggagagtaa atctcatcat 61 gcccgacaga tacagagaaa ctagcgcact gataggcacc tttacagatg tctacacagg 121 cgtgaaaagc cctgcatctt ccgtcattac gagaaggtgg tcaaacctta tcgatggtgc 181 cggcggacat tatggctacc ccaattttcc ctcagatagg gatgtaggtg gtaagtttac 241 tttgcatttc tctgaaacgc agagtttccc acagtatctt ggagaaatcc aaggctatgg 301 accttactcc aacatctcct ataaaggaag ttggatggct acccttccac tatatggcga 361 tcccggtttt tactgggacg gcaatagttt tgggcatgcc gcagtagctt atgataagat 421 gaagcctgat catcccaaca tgaacctcct taatgccatt tatgagctta aggatgttcc 481 tgaaatgctt agacagcgat ttcagaaaaa cggacttgcg agcctgggta gttattacct 541 cggtctcaag ttcggttggg aacctcttct gaaagatgtg agagactttg tgctcacgca 601 tctaaatgct cagaagactt tgaaacagct catccgtgat gagggaaagc ctgtcagacg 661 ccgtattact ttggagtctg ccagtcgcga tcctgtggaa aattccggac caggggccgg 721 tccaaccgag cccctgttca attcgtacat gtacgacgga acacattcac agttcgcgta 781 ccgtgagcta atcacatcca aaacttgggc ttcagcccag tttaggtatt ggttgccccc 841 gggcccacga gatgttgagt ggaaagctag aatgttagct gcaatctttg gattgaagcc 901 gacaccctct agcgtctaca aagctatccc gtggtcgtgg ttagtcgatt ggtttagcaa 961 cgtaggccat gttatttcta acctggatac gtcactagtc gaccgtttgg ctgcagatta 1021 cttctatgtg atgcgccaag atggagttac gcgttcgcgt acttccactc ttggtttctt 1081 cactaagggt agtcttgcac catttaccgc gacttccttg gccacctctt tctcgggaac 1141 taaaacccgg attaaaggtg atccctttgg ttttggtaca ccacaaaata gtttaagtgg 1201 tgtccagcta tcgatccttg gggctctagg tttgtcccga attcggtagt gattacccag 1261 cctgcgggaa tgcaggtgaa taacgtacca aagtaaggag cttctagtgc ttgcagatcc 1321 acagtccgtc accatcaatg gtgtagccac ttctctgccg cggacccaac agggccctac 1381 gcagaatgtg tatacatcga gcgatggtaa gacggtcatg acgaccaagc agaatattac 1441 gtctgcaagg tttcgtcgtg aggtccgtct ggctcagacg aagattgccg cagatcctat 1501 ctcggcagtc aacaaagagt caggcttcag tgcgtatctc gtcattgacg agccacgcaa 1561 tggagtattt acggatactg agatcggcta tgttatcgat gcactcaagg cttggctttc 1621 ttctgccaat tatgccaagg tgctcggcgg cgagttttga tcacaaatcg gcagataatt 1681 tatctgctga ccgagatcac gctcgtctgg atgattttgc ttttaattgc atttcatcta 1741 acatagtctt cgatagcaag gagtaagcct agacggtcct gcttcctaca tataaatgga 1801 ggttgcagtg aaaagaccga ccatgctcgt ccaggccatt ctgagacaac tcagtctgga 1861 cctagacttg tccgtagaac gcgatctgca acgtgttgca gatcgatttg aacacgaggg 1921 gctttcgttt tttacgatta cccttcctca gctttctgat gctctcgaaa gaggcttaga 1981 agctgggacg ttcacatgcc ctagtgcttt cgcacggcat ggaaggctcc cccgatttct 2041 cggaggtttc ttcaaacgtg tgttcgataa ggacggtagg ttactcaatg aaccatgtcc 2101 ttttaccatt gctggtatta ggcaagtttg tcgcttcttc aagaagctga aacttccgtg 2161 tagcccgcgc aggaatgcaa aagctatacg acatttcatt gaggtcgaag gcgaactccg 2221 cgcgatgacc tctcaagttg agagaaagga tattatcctt gacaagattt ctggaatact 2281 atggtctcag gattttcctg agcttagtta ccttgatctt gtttgtcatc acggccctgg 2341 tgtcactgct gatcgttatg cctctaatca gaggtatcgc atcacaaagt ggaaccatag 2401 atcggagtat tccttccctt ccgaccttca ctgctaccca aactatggga tcgcagccga 2461 agtcggaggt acaggggaag gaactggctg tcgtaccggt gtcgaatatc tcgaactaaa 2521 ggatgagaat cctgttcggg ttgtattcgt accgaaaacg cagacagcgc cacgagtcat 2581 agcgatagaa ccttcacacg ttcagtatat gcagcaatcc gttaaggatt tcttatatac 2641 gacgttggag actcacgcac tgactagaca ttccatacgg tttacccgtc aagatgtcaa 2701 tcagagactc gcctaccaag caagcaaaga tagacgacta gctacgctag acctgaaaga 2761 tgcttctgac cgtgtgcatt tgcacttggt tcagagaatc tttaagacct cagggctact 2821 cgaatacctc gaggatgctc gttctttgca cgctgtacta cccaacggta ctaacattgt 2881 cctgtttaag tatgcatcta tgggatcagc tttatgcttt cctgtagagg caatggtatt 2941 ttataccctt atacagagtg caatgcacat actcgatggg gggcgtccga gttcacgatc 3001 aattagccgt tatagcaaac tgatcgatat ctacggggat gacataattg tccctgtaga 3061 gtacgcggac ttcgttgtga agtacctaga gagctatgct ctaaaggtta atgtcaacaa 3121 gtcgtttaag gattcatcct ttcgcgaatc ttgtggtgcg gacttcttcg caggtgttcc 3181 ggttaatccg gtctacgcgc gaatgttgcc gcatgacagt tcacaacgct gggatgcaag 3241 tacaataatg tcatggaatg cgaccgctga tctcttttat cagagaggac agtggcacgt 3301 tgcccaagtc attagagact tgcttcgtcg agtggtgaaa cgtaccatcc ctagagcaag 3361 aaaacctggc tccgggctat cacatcttag tttcctattt gacactcatt gtcattatga 3421 caaggagctt caaggatgga agcaaaagag gatagttttt gatccagtca aaagaaagga 3481 ccaaatagat ggagacgaaa tcgcctgcct caacaaatgg ggcatttctt cttacagacg 3541 cgacagtttc ggaaacgaag gtgttggtaa ttccttcaaa cgtaggccta cttggctata 3601 cgtcggagga agccgacccc aagttcgaaa aagtcgaact gatatgggaa gagaatgcat 3661 cccggttgac gcatccgtca gcaacgaacg ggtatgcagt gttcaagaca gactgtatga 3721 gcatgggaat tcctcccgtg tccttccaga tctggctgag ctctgcgaca cgtcgtgttg 3781 cggatctcgt gaaggagaac catcatcttc aacagggagc ttcggctcat ttgtagaaga 3841 atggtggcca gacccgttaa gtcatctcac tgacgacaaa acaggactgg atttccttac 3901 tagtacgaag cgcggcagct tcaagtcgaa atgccgatgg atcagcttag ttagctgata 3961 ggggtttatt ccccggagga gatggattag cataattcat ccaagctccc accatgttgc 4021 ttcg //