LOCUS BK013538 3784 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.4_65 genomic sequence. ACCESSION BK013538 VERSION BK013538.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.4_65 ORGANISM ssRNA phage Gerhypos.4_65 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Loptevirus; Loptevirus arvivicinum. REFERENCE 1 (bases 1 to 3784) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3784) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-3784 MN032951.1 1-3784 FEATURES Location/Qualifiers source 1..3784 /organism="ssRNA phage Gerhypos.4_65" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786370" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Loptevirus; Loptevirus Gerhypos.4_65" gene 109..1353 /gene="Gerhypos.4_65_1" CDS 109..1353 /gene="Gerhypos.4_65_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50485.1" /translation="MKRNFSAVPYSFLDGTTGQMKTWYGFHDDFLMVSANHAYSKKQG RWLSGGPFHVQHVDKTHYVGPQLHWMLNGVHWTGQPHFGYGSPNLPIPMTNAVAQQQS TIAQADAWSYGATGWKRSRPGNPTANVLTSVAETLREGLPRIPLDLFNRLTALIQGKN TWRRLHGTNPGSEYLNGIFGWLPLLNDIKDMYETYRNIDKQLAQIYRDNGKGIHRRRE IKNTTTITPIQDTRSSTPFTGGWQNVPPIWTTGSTRLIEVREDIERVWFVGKFRYYIP DIGSSQWKARTTRALFGVNPTPEVIWNLLPWSWLADWFGNVGDVMSNLSSNAVDNLAA EYAYVMRTVETRSRMSSYTTWNDNLLTNREIRSGVMSGEAFSSTIRKTRVVGSPYGFG ANFDSFSNYQLGVLAALGISRV" gene 1379..1729 /gene="Gerhypos.4_65_2" CDS 1379..1729 /gene="Gerhypos.4_65_2" /codon_start=1 /product="coat protein" /protein_id="DAD50486.1" /translation="MFADPQSVTVNAVAQSLPAIERNGQSSVYQKDDATYKLTVSHQY GKRKRFTVRLDAQKIAADPLTSANNLLYSSSVYMVLDGPTIGYTNAELRDIAVALSSW CTSANLLKVLGGET" gene 1862..3763 /gene="Gerhypos.4_65_3" CDS 1862..3763 /gene="Gerhypos.4_65_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50487.1" /translation="MIFRQYTVIWLTGELRKKLQQTLDRRTPITGGVVKSLVWLSEQV LLNCGTRCGVDPTMDVRTLHRRTENEGESFLTITLPSYCKAFEKALDIGRLDPSDLSG YHFRHGLPLFLRGFLSKIFGTDRKLLKDPCIDCIQSVRQICLLHKKVLLPCSERRERK AEQAFLKCEDELDGLDFSEALSGYFDKVSSIVLADILAGIPNGDPYEELRPVHGPGST QEKILGNSKYSLQRWHNRLEAEFPFTEYGVGSLRNLGEDDCPLANVEFIEPENEEPVR VVFVPKTLKTPRVIAIEPVCMQYTQQALLKFLVPLIENSGYAGGHVNFTRQSTNQVLA LRASVDGCLATIDLSEASDRVHSDLVRRLLRVCPILSDMVFACRSTRAKVPSGKIVTL NKFASMGSALCFPMEALTFFCVIVASRLHRAKLPVTGKNVREYSRTVFVYGDDIIVPS DEAPSICDDLSLFGLKVNTNKSFWTGKFRESCGMDAYDGVNITPVYCRRRSPANRRNH SELVSWVEMANQFYRKGLWSVAQKIRDLINSMMRTPLPFVDRNSAGLGWASYSNARTI HRWNRQLHRFETKAMVIRPKRYIDPLSGDGALLKCFRIIGSQANDLKHLYESVRRGAL TLKLQWVPA" ORIGIN 1 cccgggaggg ggggtcggta gctttcgcta ctttggtggg ttacaccacc agtcccgggt 61 tctctgtgaa ccttcacaga aacctgtatt ccaagaggag ggtaaatcat gaaacgcaac 121 ttttcagctg ttccttatag tttccttgac ggaactactg gacagatgaa aacttggtac 181 ggttttcatg atgacttctt gatggttagc gcgaaccatg cttattctaa aaagcaaggt 241 cgctggttat ctggaggccc ctttcacgtc cagcatgtag ataagaccca ctatgtgggt 301 cctcaactac attggatgtt gaatggagtt cattggacag gccaacccca ctttgggtat 361 ggttctccca atctcccgat tcccatgact aacgcggttg cacaacagca gtccactatt 421 gctcaggctg atgcctggtc atatggagct actgggtgga aacgctcacg tccaggaaat 481 cctactgcaa atgttttgac ctctgtggcc gaaactttgc gtgaaggact tccaagaata 541 ccacttgatc tcttcaatag gcttactgcc cttatccaag ggaagaatac ctggcgaagg 601 ttacacggaa ccaatcctgg ttctgagtat ctcaatggta tcttcggttg gctacctctc 661 cttaatgata ttaaggatat gtacgaaact tatcgaaata tcgataagca actcgcacag 721 atttaccgtg ataacggtaa aggtatacac cgtcgtcgtg aaatcaagaa taccactact 781 attaccccca tacaggatac tcgttcttcc actcccttca cagggggatg gcagaatgta 841 cctcctatat ggaccacggg ctcgactaga cttatcgagg ttcgtgagga tatcgaaaga 901 gtatggtttg tcggaaagtt ccgatactat attcccgata ttggttctag tcagtggaag 961 gcgcggacaa ctagggcact ttttggtgta aatcctacac ctgaagtgat ctggaatctg 1021 ctaccctggt catggttggc tgactggttt ggaaatgtag gggacgtcat gtccaatcta 1081 tcttccaacg cagttgacaa ccttgccgcc gagtatgcgt atgtcatgcg gaccgtggaa 1141 acacggagcc gtatgtcatc gtataccacc tggaatgata atctcttaac caacagagaa 1201 atcagatcag gtgtgatgtc tggcgaagcg ttttcttcga cgattcgcaa gactcgggtg 1261 gtaggctctc cttacggatt cggcgctaat tttgatagtt tctcaaacta tcaacttggc 1321 gtcttagctg cactcgggat ctctcgagtg taaccttgtc cccgtttcgg agctccaaat 1381 gtttgctgac cctcagtctg tcactgtcaa cgccgtagct caatcgcttc ctgcgattga 1441 acgtaatggt cagtcctcgg tttaccagaa ggacgatgct acgtacaagc ttactgtcag 1501 tcatcagtac ggaaaacgta agcgctttac tgtgcgtctt gacgcacaga agatcgctgc 1561 cgatccactg acttctgcca ataatctctt gtactctagc tccgtctata tggtcctcga 1621 tggcccgacc attggctaca cgaatgccga attgcgcgat attgcagttg ctctttcgag 1681 ctggtgcacg tcggcaaatc tgctcaaggt gttgggtggt gaaacctgat ttgaacgatg 1741 agaaactttc atcccattgt tcttgtctac ttcatcacca tactgacact gatttgtatc 1801 ggatgtgaat tcgatgcaaa ttttatcaac tggtactatg ggaatctttc catagtaatg 1861 gatgatcttt cgtcagtata cggtcatatg gcttactggg gagcttcgta agaagctaca 1921 gcaaaccctg gaccgacgaa cccccataac aggaggcgtc gtgaaaagcc ttgtatggct 1981 ctcggaacag gtcctgctaa attgcgggac taggtgtggt gtcgacccga caatggatgt 2041 gagaacactc catcgtcgta ccgagaatga aggtgaaagt ttcttaacta tcactcttcc 2101 gtcctattgt aaagcatttg aaaaagcgct tgacataggt cgcttggatc caagtgactt 2161 aagtggttac cactttcgtc acgggctccc cttatttcta aggggtttcc tttccaagat 2221 attcggtact gatcgtaagc ttcttaagga tccttgcatc gactgcattc agagcgttag 2281 gcagatttgc ctattgcata agaaggtctt actcccgtgc tcagaaaggc gcgagagaaa 2341 ggcagagcag gcgttcctta agtgtgagga tgaactcgat ggtcttgatt ttagtgaagc 2401 tttatcaggt tattttgata aagtttcatc tattgtcctt gcggacatcc tcgcagggat 2461 ccccaatggg gatccctacg aagaactcag accagtccac ggtcctggtt caacccagga 2521 gaaaatactt ggaaattcca agtattctct acaacggtgg cacaatcgtc ttgaggctga 2581 atttcctttt accgaatatg gtgtcggatc actccgaaac ctcggtgagg atgattgccc 2641 tcttgcgaat gttgagttca tcgaacccga gaacgaagaa cccgtcaggg ttgtattcgt 2701 tcctaagact ctgaagacgc ctcgtgtcat agcaattgaa cctgtgtgta tgcagtatac 2761 acaacaggct ttgctaaagt tcttggttcc actaatagaa aatagtggat atgccggtgg 2821 tcacgtaaat tttacgcgcc aatcgacaaa ccaagttcta gctcttcgcg cttcggttga 2881 tgggtgctta gcaaccatag accttagtga ggcgagtgac cgagtccatt cagatctcgt 2941 gcgtcgattg cttcgcgttt gccctatcct ctcggatatg gttttcgctt gcaggagcac 3001 gagggcaaaa gttcctagtg gcaagattgt cactttgaac aaatttgcct cgatgggttc 3061 agccctatgt ttcccgatgg aagctttgac gttcttttgc gtcattgttg cgtcgagatt 3121 acatagagct aagcttccgg ttaccggtaa gaatgtacga gagtacagtc gtaccgtttt 3181 cgtctatggg gatgatatca ttgtcccctc agacgaggca ccttcgattt gcgatgacct 3241 aagcctgttc gggctgaaag tcaacacaaa caagtctttc tggactggga agttcagaga 3301 gtcttgtgga atggacgcct atgatggagt aaacataaca cccgtttact gccgtcgtag 3361 aagtccagca aatcgacgga accatagcga gctcgtatcg tgggttgaga tggcaaacca 3421 attctatcga aaaggtttgt ggtctgtggc ccagaagata agggatctca tcaattctat 3481 gatgaggact cctttaccct tcgtcgatag gaactcggca ggattaggtt gggcgagcta 3541 cagcaatgct cgtacaatcc atcgttggaa tcggcaatta catcgctttg aaaccaaagc 3601 tatggttatc cgacccaaac ggtacatcga tcccctttca ggggacggtg cactcctgaa 3661 gtgcttcaga attattggct cacaagccaa tgaccttaag catctctatg agtccgtgag 3721 gcgtggagcc cttacactaa agctccaatg ggtcccggct taaaccgccg gggttgagga 3781 agta //