LOCUS BK014081 3622 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage SRR5466337_1 genomic sequence, sequence. ACCESSION BK014081 VERSION BK014081.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage SRR5466337_1 ORGANISM ssRNA phage SRR5466337_1 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Kempsvovirus; Kempsvovirus caenivivens. REFERENCE 1 (bases 1 to 3622) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3622) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry SRR5466337 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3622 /organism="ssRNA phage SRR5466337_1" /mol_type="genomic RNA" /isolation_source="activated sludge" /db_xref="taxon:2786387" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Kempsvovirus; Kempsvovirus SRR5466337_1" gene <1..1363 /gene="SRR5466337_1_1" CDS <1..1363 /gene="SRR5466337_1_1" /codon_start=2 /product="maturation protein" /protein_id="DAD52358.1" /translation="GFPPTLGASVLWLSLPVLGRPSKGVSTRASTTLLLEFLMVSRIS TFPVVARDEIVDGWPYGNPGIYTNKFPFVPSTGLTFRTLSSSRNGSSVPGWRQKIARG INATSDFSATLERGYIEPLMDHMRGTTWKGNYGWVYMRKTAGWWSFGLTSVPSAPSAS LVNSVSNRAATAFYKKLASQLTLFQGATALGELAETLRMIKNPAKALRKSVDDYLSTA QKRKRGPKRRLDKDLADTYLEYMFGWAPLIKDIDDARTYLDRRQEQLCNQLIPITAIA SGSESSDVATSQNLNFVNAYARILTSKTVQHRYKGAIRTTVAGNSSFTAGTLGFAPKD FLPTAWELLPWSFVIDYFTNIGDVISAYSIGRMGLAWGCSTLRTESLSTVYGINTTLN IAEVMYRYTRNGSGWLYRKSVNRTSINSVPLPEIQFELPGLGTKWLNLAALTTAKLTT SKH" gene 1391..1855 /gene="SRR5466337_1_2" CDS 1391..1855 /gene="SRR5466337_1_2" /codon_start=1 /product="coat protein" /protein_id="DAD52359.1" /translation="MTVNITSPITGAAQTGLTSPTYTNVSMAGPDANVKQVAVTALGG TQTGVDVHSVARPFTISYWWPKVLRVLPSLSSNGQLASVPMNVYKVITRKGVTPLVGQ PSKTMLITTSIEVPAGADTADAPNVRAALSAHIGTLSQQSAGIGDTGVSGVA" gene 1910..>3622 /gene="SRR5466337_1_3" CDS 1910..>3622 /gene="SRR5466337_1_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD52360.1" /translation="MGHIHPRSLYLDCLHDLASGLPGSVVSRLQDDNFASIEPWPDIS HREMASLKLLTSVLKKFQDDIDQSATDKPALEKFLSVNERCRNWSYQPESTWDEVLMG ELRSVVYDFFYPDGDPLITSSDQIFDRVRSGPGSSIGSSSTDFYTKFFESDLSTSSIG LYRAYRNYIKRLPEWEIAEQFRLSSFGMPTVVSSNRLRFVPKTRDISRSICIEPTLNM GYQLGLGSLIEDRLRSFFGIDLSLQPDINRELSRRGSIDGAFCTIDLESASDSMSLHM LHHIVPSQQLAWFLVGRSENTELPDGHSVKLHMISTMGNGYTFPLQTMLFASIVTAAA RARDFFLGRPRGASDCTFGVFGDDIIVPTGAHYERKRKLFVNYSEYLSRSVLRLLDIT GFVVNSSKSFFEGPFRESCGYDSFRGHNVRGVYLKSLRTTHDRYSAINAFNDWTARTG IPLPRVVHTLLRTVPKRAIPRADDSAVGIRVPFSFIRRYVRHRDTGAILYRTFIAKSR RVNLGEQFQARSKCNPSGLLIAFLNGTIRSGTIVLRSRDVKYRNLYSQTPWWDFPGYG YKPDP" ORIGIN 1 ggggtttccc cccaccctcg gagcatccgt gctctggctc tctctgcccg tactcggccg 61 cccttccaag ggcgttagta ccagggcttc aaccaccctg ttattggagt ttctcatggt 121 ttccagaata agtacctttc ctgttgttgc aagagacgag atcgttgatg gctggccgta 181 tggtaacccg gggatttaca caaataaatt cccgtttgta ccttcgactg gcctcacgtt 241 tcggacgctt agcagcagca gaaatggttc gtccgtgcct ggttggcgcc aaaaaattgc 301 aagaggtatc aacgctacaa gtgacttttc agccactttg gagcgggggt acatcgagcc 361 gttaatggac cacatgcgcg ggactacttg gaaaggaaac tatgggtggg tctatatgcg 421 taagacggca ggctggtggt cctttggact taccagcgta ccttccgcgc catcagcctc 481 acttgtcaac tccgtaagta atcgggccgc taccgcgttt tataagaagc tcgcatcgca 541 gctaaccttg tttcaaggtg caactgcgtt gggtgagctt gctgaaacgc ttcgtatgat 601 caagaatcca gccaaggctt tgcgcaagtc cgtcgacgac tatctgtcaa ccgcacagaa 661 gcggaagagg ggtccgaaac ggcgtcttga caaagaccta gctgatacgt atctcgaata 721 catgtttgga tgggctccgc tgatcaaaga cattgatgat gcgcgtacat acttagaccg 781 ccgccaagag caattgtgta atcagttaat accgattacc gcaatcgctt caggcagtga 841 atctagtgat gttgcgactt ctcagaattt gaacttcgtg aacgcatacg cacgtattct 901 aacctctaaa acggtacaac accgctataa aggggcgata cgtactaccg tagcagggaa 961 ctcaagcttt acagccggga ctttaggttt tgcacctaaa gacttcctgc ctacagcttg 1021 ggaacttctg ccatggtcgt tcgtgatcga ttacttcacc aatataggtg acgtaatttc 1081 ggcttattct atcggccgga tgggactggc ctgggggtgt tctaccctca gaactgagtc 1141 cttatccact gtttatggta ttaataccac cttaaacatc gccgaagtta tgtaccgata 1201 tacgagaaac ggctccggat ggttgtatag gaagtctgtg aaccgtacgt caataaactc 1261 ggtcccccta cctgaaattc aatttgaatt accaggccta ggaaccaagt ggcttaattt 1321 agccgcattg accactgcga aactcactac ttcaaaacat taacctcgtt aaacccagga 1381 gtacagtcca atgactgtca acatcacctc acccattacg ggtgcggccc agaccggtct 1441 gacctcgccg acgtatacaa atgtcagcat ggccggaccg gacgcgaatg tcaaacaagt 1501 tgcggttacc gcccttggcg gaactcagac cggtgttgac gttcactccg tagcacgccc 1561 gtttaccatt tcgtactggt ggccgaaagt acttcgcgta cttccgtccc tcagctcgaa 1621 tgggcaactg gcatcagttc ccatgaacgt atataaggtg atcacccgca aaggtgttac 1681 acctttggtc ggtcaaccgt ctaagaccat gctgattacg acctctattg aggtcccggc 1741 aggggcagat acggctgacg cgcccaacgt tcgtgcggct ctcagcgccc acatcggtac 1801 cctcagccag cagtctgctg gcataggtga cacgggtgtt tccggagtag cataaaatgc 1861 ttccggttag cgctgagcgt aaaaagaaac tgatacggag tgctaagcga tgggccacat 1921 acaccctcgt tctttgtacc tcgattgctt acatgacctt gcctccgggc tcccaggaag 1981 cgttgttagc cgtcttcagg acgataactt cgcctctata gagccctggc ctgatatctc 2041 ccatcgagag atggctagcc tgaagcttct tacgagcgtc ttgaagaaat ttcaagacga 2101 tatcgatcag agtgcgacag acaaacctgc cctcgaaaag tttcttagcg ttaatgagcg 2161 ctgcagaaac tggagctatc agcctgaatc cacctgggac gaagtcttaa tgggcgagct 2221 gcgaagcgtc gtctatgact tcttctatcc agatggagac cctctcatca cttcttccga 2281 ccaaatcttt gatcgggtgc gaagtggtcc tgggtcgtct ataggtagct cgtcaacgga 2341 cttctatacg aagttctttg aaagtgacct atcgacttca agcattggtc tgtaccgagc 2401 gtatcggaac tacattaaaa ggctaccaga atgggaaatt gcggagcaat tccgtctttc 2461 tagttttggg atgcctacgg tagttagcag taaccgtcta cggtttgtac ctaagacgcg 2521 cgatatctct aggagcatat gcatcgagcc taccctcaat atgggttatc agctcggtct 2581 aggctctctt atcgaggata ggcttcgatc gttcttcgga atagatctta gccttcaacc 2641 cgatataaat agagaactga gcagacgcgg ttccatcgat ggtgcattct gcaccataga 2701 tttagagtcc gcttctgatt caatgtccct tcacatgctt caccacattg ttccaagcca 2761 acaattggct tggttcttag tgggtcgcag tgaaaacaca gaactgcccg acgggcactc 2821 ggtgaagctt catatgatat ctacgatggg taacggttat acgtttccat tgcagaccat 2881 gctgttcgct tctatcgtta ctgccgccgc acgtgccagg gatttcttcc ttggtaggcc 2941 acgtggggct agcgactgta cttttggtgt ctttggggac gatattattg tgcctaccgg 3001 ggctcactat gaacgtaagc gtaagctttt cgttaattat agtgaatacc tcagtagatc 3061 agttttgcgt ctccttgaca tcacaggatt cgtcgtgaat agcagtaagt ccttctttga 3121 aggaccgttt cgcgagtcgt gtggttatga ctcctttcgg ggccataatg tacggggcgt 3181 atatctaaaa tcgctccgta cgacgcacga tcgttatagt gccatcaacg ctttcaacga 3241 ctggaccgca cgtactggca tccctctacc gagggttgtt catacgttgc tcaggactgt 3301 ccctaaaagg gccataccta gagcagacga ctcagctgtt ggaatacgtg ttccgttctc 3361 cttcattaga cgctacgtaa gacatcgtga tactggagct attttatata gaacctttat 3421 cgcaaagtcg cgtcgcgtca atttgggcga acagtttcag gcgcgctcta agtgtaaccc 3481 ttccgggctg cttattgcgt ttctgaatgg cactattagg tccggtacta tcgtccttag 3541 aagtagggac gttaagtacc gaaacctgta ctcacagacc ccctggtggg actttccagg 3601 ttatggctac aagcctgatc ct //