LOCUS BK013632 4387 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage SRR5466369_2 genomic sequence. ACCESSION BK013632 VERSION BK013632.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage SRR5466369_2 ORGANISM ssRNA phage SRR5466369_2 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gihfavirus; Gihfavirus pelohabitans. REFERENCE 1 (bases 1 to 4387) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4387) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry SRR5466369 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4387 /organism="ssRNA phage SRR5466369_2" /mol_type="genomic RNA" /isolation_source="activated sludge" /db_xref="taxon:2786405" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gihfavirus; Gihfavirus SRR5466369_2" gene 502..1881 /gene="SRR5466369_2_1" CDS 502..1881 /gene="SRR5466369_2_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50808.1" /translation="MPYFREYFKDRSFTQFSSVASVNDIPVIQESTVVDSFRSRPHRN AVISKEIPDSTADPYAYFLDNMSKSKYRKLLRERNLPEQGEPDRGHSFSLSKFSLHGS MIDITRVTKSFGFPEGTSWFNDQFLRPSGTPSGQHSWLTPAPLPNGGALLTFAQNAYA KVAPTSVVFDAAQFLGELREGLPRLVPDLLKSGANVFKKAGSDYLNVEFGWKPFINDL IKAGEALSNATHALKGTNQRVHRRYGTPPSYTIDAEINSGPISMGHGHRGISTRFPEF DDGSAVGGTALTGATVSHALRTTERSRWFEGEFTSFMKLGFDPSNYFDRLDALVNVKL TPDVLWELAPWSWLIDWGLQIGDTIKANELAANDRLVMHYGYAMETTRSRDLVSVDMS ACLRSKPATSSYTYYPGLDKSATYVSETVYKRRLRANPYGFRIGGLQGLSASQVAILG ALGLTKSGR" gene 1939..2298 /gene="SRR5466369_2_2" CDS 1939..2298 /gene="SRR5466369_2_2" /codon_start=1 /product="coat protein" /protein_id="DAD50809.1" /translation="MLADPISVKVAGAATNHPRVSVGKEYNEYSVADATSKVRVGHSA SKTANRSFVTSIGTKVAADPISAVNQSVTRTITISVSRGKFGFSNAELKQSILDLCEF LTASTGANIDKLLGGES" gene 2298..2396 /gene="SRR5466369_2_3" CDS 2298..2396 /gene="SRR5466369_2_3" /codon_start=1 /product="hypothetical protein" /protein_id="DAD50810.1" /translation="MEGVITALLVVLISGFFTVSVVGIATYASRRS" gene 2507..4306 /gene="SRR5466369_2_4" CDS 2507..4306 /gene="SRR5466369_2_4" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50811.1" /translation="MKSLLTLHNLVLASVGQHCSIGIDRDVSYLSVRWEDEGDSFLTI TLPRFAKALERGLETGQWPGHEPLGFKRNGGLPAFMRGFLTRIFGKDGRILDDPDVEC VWAVRQVCYLSHKIERDCTPERERAAFSQFVRTDGELIGLPGRIDRGKLLSFERTADR LFGDLFSMLDRKIAHYELVPKHGPGAVAERKSQLEKRSYDYWTERLESVFPYWRYTRN TGYAASDLPIPTDTEIPVRVVSVPKTQATPRIIAIEPSSVQYAQQGLKREIYEWIGKH TLGSVLGFQDQSRNQMLACEASISGSHGTLDLSEASDRVHWFLVWRMVHRWPHLWDFL RATRSYRAQVPGEGIIPLQKFASMGSALTFPLEAMIFTILSLCGIEDSRSTKLRTRDL PGVLSVYGDDIIVPVDTVGAVVDWLEHFGAKVNRAKSFWNGKFRESCGAEYYRGTDVS VVRLRQDLPRSQRDAAELASLVDFRNRCYRAGLWVLIPQLDEELESLIRLPLSNVLPT DLELGRFTPYLARETFLPHHPVVWRVNHDYQVKERRVPYLSPRSESYVVDGEAGLLEW FHDSIRQSDLRDRYDSKERSSTFNIKRRWVEVR" ORIGIN 1 tttccctttc tctttgcttc gggaagcgag atgctcagaa cctatatcct ggggcagtca 61 gagttcacag ccagcctgcc ggacagatac aagctgccgg accgggcatg gctcagattg 121 aacgctggcg gcaggcctaa cacatgcaag tcgaacggta acaggaagaa gcttgcttct 181 ttgctgacga gtggcggacg ggtgagtaat gtctgggaaa ctgcctgatg gagggggata 241 actactggaa acggtagcta ataccgcata acgtcgcaag accaaagagg gggaccttcg 301 ggcctcttgc catcggatgt gcccagatgg gattagctag taggtggggt aacggctcac 361 ctaggcgacg atccctagct ggtctgagag gatgaccagc cacacccggg ccgccagaag 421 cgacccggga ccgtcgatgc caatcgacac tcacctgcac tgtgtacaga ggagtttgct 481 cttttaccgt atggaggata gatgccttac tttagggagt atttcaaaga taggagcttt 541 actcaatttt cgagtgtagc ctccgtcaac gatatccctg tgattcagga atccacagtg 601 gtcgactcct ttcggagtcg gcctcatagg aacgccgtga tctcgaaaga gattccggat 661 tccactgcgg atccctatgc ttacttcttg gacaatatgt ctaagagcaa atatcgcaag 721 cttttacgcg agcgtaacct gcctgagcaa ggagaacccg ataggggcca ctccttttct 781 ctgagtaagt tttcactgca tgggtccatg atagatatta cccgggtgac taaatcattc 841 gggtttcctg agggcacatc ctggtttaat gaccagttct tgcggccctc tggtactcca 901 tctggacagc attcctggtt gacgcccgca cctctcccta atgggggagc tctgctgacg 961 tttgcccaga atgcgtatgc aaaagtagca cctacgtcgg tcgttttcga tgcggcccag 1021 ttccttgggg agctccgtga ggggctcccg cgtcttgtcc ctgatcttct aaagtcaggt 1081 gcgaacgttt tcaagaaggc tggttcagat tacctgaacg ttgagttcgg gtggaaaccc 1141 tttatcaacg acctcatcaa agcgggagaa gcgttaagca acgcgactca tgcactcaaa 1201 ggtactaacc agcgagtgca ccgacgctat gggacaccac cgtcctacac catcgacgcc 1261 gagattaact cgggtcccat ctctatggga cacggacatc ggggtatttc tacccgtttt 1321 ccggagttcg atgatgggag cgctgttggc ggaaccgccc tcacgggcgc aaccgtttca 1381 cacgctctta ggacaacgga acgttctcgt tggtttgaag gggaattcac cagttttatg 1441 aagctgggct ttgatccgtc gaattacttc gacaggctcg acgctctagt gaacgtaaag 1501 ctgacccctg atgtcctttg ggaacttgcc ccgtggtcct ggctgatcga ttggggtctc 1561 caaatcggag acaccatcaa ggctaatgaa ttagccgcga acgatcggct ggtgatgcac 1621 tatggctatg ccatggagac tactagatca cgtgatctcg tctctgtgga catgtctgcg 1681 tgcctccgtt ctaaaccggc cacctcgtcg tatacttatt atcctggttt ggataaaagt 1741 gctacgtacg taagtgagac ggtctacaag cggaggctcc gtgccaaccc atacggtttt 1801 aggatcggtg gcttgcaagg tctttcggcc tcgcaggttg ccatccttgg cgcgcttgga 1861 ctcacaaagt ctgggcgata ggtttggtca gccttaactg acttttttct accaattcca 1921 aaacaatgga gggcttccat gctcgctgac cctatttctg tcaaggttgc gggagccgcg 1981 accaaccacc cacgcgttag cgtgggtaaa gagtacaacg agtactcggt tgcagacgcc 2041 acctctaagg tgcgcgtcgg tcactcggct tccaagactg ccaaccggag cttcgtaacc 2101 agtattggta cgaaggtggc tgctgacccc atttctgcgg tcaatcagtc cgtcacccgc 2161 acgatcacca tttcggtgtc tcgaggcaag ttcggcttct ccaacgctga gttgaagcag 2221 tcgatcctcg atctgtgcga gttcctcacg gctagcaccg gtgctaacat cgataagttg 2281 ctcggcggtg agagctaatg gagggcgtca ttacggcgct tctcgtagtc ctcatctccg 2341 gcttcttcac ggtgtctgtc gtaggtatcg caacctacgc cagcaggcgg agttaaaact 2401 cctgaggtac cttctccaaa agagaagaaa cctcggcctg tagccacttg tgtacggtag 2461 gtgtctgaga gcggcggagc tggatcacca cccttgaaag gggatgatga aaagcctgtt 2521 aactctccac aacctcgtgc tggcctcggt aggccagcac tgttcaatcg gcatcgaccg 2581 ggatgtatca tacctctcgg tacgatggga agatgagggt gatagcttcc taactatcac 2641 tctgccacgt tttgctaaag ccctcgaaag gggactcgaa acaggacagt ggccgggtca 2701 cgaacctctt ggtttcaaga ggaacggagg gctccccgct tttatgcgag gtttcctcac 2761 ccgtatcttc gggaaggatg gtcgaatact ggacgacccc gacgtggaat gcgtctgggc 2821 tgtgaggcag gtttgctacc tgtcccataa gattgagcga gactgtaccc ccgaaaggga 2881 acgtgctgct ttctctcagt ttgtccgtac cgatggtgaa cttattggtc ttcccggtcg 2941 tattgaccgg ggaaaactcc tttcttttga gaggacggct gataggctct ttggtgacct 3001 tttctctatg cttgatcgca agatcgcgca ctatgagttg gtccccaagc atggcccggg 3061 tgcagtcgct gagcgcaaat ctcaactcga gaagcgttct tatgactact ggacggaaag 3121 actcgaaagt gtttttccgt actggcgtta taccaggaat actggttacg cggcatctga 3181 cctgcccatt cccactgata ctgagatacc tgttagggtt gtctcagtcc cgaaaaccca 3241 agccaccccc cggatcattg cgatcgaacc ctctagcgtg cagtatgcac aacaggggct 3301 gaagcgcgag atttatgagt ggattggcaa gcacacctta ggaagtgtgt tgggtttcca 3361 ggaccaaagt cggaatcaga tgttagcttg cgaggcaagc atctccggct cccacggtac 3421 ccttgacctc tctgaggctt cggaccgtgt tcattggttc ctggtatggc gtatggtaca 3481 tcggtggccc catctctggg atttcctacg tgccacgcgc tcatatcggg cgcaggttcc 3541 tggggagggt attatacctc tccagaaatt tgcatctatg ggatctgctc tgacgttccc 3601 actcgaggct atgatcttca cgatcttgtc tctgtgtgga atcgaggaca gtcggagtac 3661 gaaactccgc actcgggatc tcccgggtgt cctttcagtc tatggtgacg atattatcgt 3721 tcctgtagac acggttggcg ctgtagtcga ttggcttgaa cacttcggtg ccaaggtcaa 3781 ccgagccaaa tccttctgga atggaaagtt ccgggagtca tgtggtgcgg aatattaccg 3841 cgggacagat gtttccgtcg taagactccg ccaagacctt cccaggtcac agcgcgatgc 3901 agctgaacta gcctcgttgg tggacttcag aaaccggtgt taccgtgccg gcctatgggt 3961 ccttataccg cagcttgatg aggagttgga atccctcatt aggttgcctt tatccaacgt 4021 gctaccaaca gatctcgagt taggtcggtt tacaccgtac ctagcccggg agaccttcct 4081 tccccatcac cctgtggtgt ggcgtgtaaa ccacgactac caagtgaagg aaaggcgcgt 4141 cccttacctc tctccgcgca gcgaaagcta cgtcgtagat ggcgaggccg gtctgttgga 4201 gtggtttcat gactcgattc gccaatcgga tcttagagat cgctatgaca gcaaagagcg 4261 ttcctccacg ttcaacataa aacggaggtg ggtcgaagta cgttaagtac ctcgatggta 4321 ggagttccaa acctacctgc gggggcctag gataatccta ggcctggggg atgtcacagt 4381 tgttaag //