LOCUS BK013640 3510 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage SRR5466725_17 genomic sequence, sequence. ACCESSION BK013640 VERSION BK013640.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage SRR5466725_17 ORGANISM ssRNA phage SRR5466725_17 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Gahlinevirus; Gahlinevirus luticola. REFERENCE 1 (bases 1 to 3510) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3510) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry SRR5466725 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3510 /organism="ssRNA phage SRR5466725_17" /mol_type="genomic RNA" /isolation_source="activated sludge" /db_xref="taxon:2786415" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Gahlinevirus; Gahlinevirus SRR5466725_17" gene 164..1249 /gene="SRR5466725_17_1" CDS 164..1249 /gene="SRR5466725_17_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50834.1" /translation="MGPITGPFNEIVDVIGRYSSRTIWKQKPPYNLRLPYRARLTTSN NPYHSPASYGFDPGQNELDLVRNKCYDRFMVELRKLSTSPAGWGMTLASHQQARSMFN KRGANLLEYITKLERNFRSTRKRRTTKEWSSFFLEYRFGWEPILKDIHASMEIIASQP KTGLISSSARGFYEIKPKRDPSDFDTLISVNGQIRYRMMADVEVSNPNVYLLNTLGLV NPAVVAFDRIPWLFVLDWWTNFAQMASSLTDFYGLSVSNGTTTKKISNKGTYGYFRSG GKPVLDQYGYQTESILRELGTPSPRFAIKPFEGLSMVRGATAIALTLQLLTPEVTPGS LKRGRFYKWEPIGKNDNPFLKLRQRKK" gene 1304..1705 /gene="SRR5466725_17_2" CDS 1304..1705 /gene="SRR5466725_17_2" /codon_start=1 /product="coat protein" /protein_id="DAD50835.1" /translation="MPQMADVTVKKSDGTSNSVYVALTPSAGDKTPAVWRCNADSSIP AHRTEFRLVSGWNDKRNARRVETSGSAPYVSNDASGRPQIMGRVNFGGGAIYVDQNVP DAFVNDKVAEYANFCASPLVKASYASGYAPV" gene 1727..3424 /gene="SRR5466725_17_3" CDS 1727..3424 /gene="SRR5466725_17_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50836.1" /translation="MILSTAVVESTLRVCEGAATPRALTVAILLRYGEWDQLVSLRVD PMRYDHAESYYRDAVVTELLRKVQGLPLTVNLHEEAIKSFFESEAQCYRTNERLSPYL EGGSHPLYDERIGRIVRAARKKMTQIIGRPEKTNQGHFGPGATFADRGANTTVAHKMS SNPVLTTLALPFMFDWVDTQWAKAVAAREDSSFSIVRGNRFTSVPKDSTKNRGICIEP SVNLYYQLGVGAILKKRLRATGIELAVPEGPYLPNGLSGIIGLATGIDGQERHKRKAR DASSSGSHATVDLSSASDTVCSNIVKLLLPDDWYEILSDLRSPYTLMGDNWVKLEKFS SMGNGYTFELETLIFLCLIMGLASEMGLDYVIGEDVLVYGDDIIVPSEFAGETLAMLK FFGFTPNERKTFCSGHFRESCGGDYFQGANVRPYNLEGDPCEPQELIAYANGLVRLGD RDFISDHFRRHLRRAWFCVLDAIPSHIRRCRGPEHLGDIVIHDHPDYWGYLHDHGDSQ MSWIRVYRPARFRRVTWDNFTGRVQLACATLGYGDGTLGIIPRDSVSGYKVGRVSVS" ORIGIN 1 ctcgcgggaa cctcgttctg ttggctatca ctcgacctga gtggtttctg ccttcagagc 61 cctttataaa aagggctcta tcctttggtc ggttcactac cgatccgtta aatcaaaggg 121 aattgtctct gtgcgatctc cttgcaaatg gaggttgaaa aacatggggc caatcacggg 181 accgttcaac gagatagtag acgtcattgg acgctacagc tctagaacaa tatggaagca 241 aaagcctcca tataatctcc gcttacctta tagggctcgt ttgactacgt cgaacaaccc 301 ctatcactct cccgcgtcct atggtttcga ccctgggcaa aatgaactcg atctagtacg 361 taacaaatgc tacgatcggt tcatggtgga gttgcggaaa ctctcaacgt cgcctgctgg 421 ctggggtatg accctagcat cgcaccagca agcgcggtca atgttcaaca agagaggcgc 481 caacctcctt gagtacatta ccaagttaga gagaaatttt agaagcacca ggaagcgccg 541 caccactaaa gaatggtcgt cgtttttcct tgagtatcga ttcggctggg agccgatcct 601 caaagatatt cacgcttcaa tggagataat cgctagtcaa cccaagactg gcctcatatc 661 atcctctgct cgagggtttt atgagattaa gcctaaacgg gacccatctg attttgacac 721 gttgatttcg gtcaatggtc agattagata ccgtatgatg gctgacgttg aggtttctaa 781 ccctaacgtt tatctcctca acacactggg actcgtgaac cctgctgtcg ttgcttttga 841 ccgtataccc tggttgttcg ttttggattg gtggaccaac ttcgcccaaa tggctagttc 901 gctcactgat ttctacggac tctcagtatc caatggtact actaccaaga agatatcgaa 961 taagggaact tacggttact tccgttctgg agggaaaccc gtacttgatc aatacgggta 1021 tcaaacagag tcgatcttgc gtgaactcgg gacaccgtct cctcgtttcg caattaagcc 1081 ttttgaaggc ttatccatgg tgcgtggcgc cactgccatt gcactgactc tccaactgtt 1141 gacccctgag gtcacacccg gctcactgaa gcgtgggcgt ttctacaagt gggaacctat 1201 cggaaaaaac gataatcctt tcttaaagtt gcgtcaaagg aagaagtaaa ttctttttcc 1261 ccttcagctg tcggtttata aaccaccctt cgaaaggtag atcatgcccc aaatggctga 1321 tgtcacagtg aaaaaaagcg acggtacctc caactccgtc tacgtagcac tcacaccgtc 1381 agcgggggat aaaacccccg ccgtgtggcg ttgtaatgcc gactcctcca tcccagccca 1441 ccgcactgaa ttccgtttgg tgtcgggttg gaacgacaaa cgaaatgccc gccgggtgga 1501 aacatccggc tccgcaccct acgtcagcaa tgacgcttcg gggcggccgc aaatcatggg 1561 tcgtgtcaat ttcggaggag gcgctatcta cgttgaccag aacgttcctg acgcattcgt 1621 gaacgacaaa gtcgctgaat acgccaattt ctgtgcgagc ccgcttgtga aagctagcta 1681 cgcatctggt tacgctccgg tttaaccaga tcagaaagga acaaatatga ttctatcaac 1741 tgctgttgtg gagtccacct tgcgcgtctg cgaaggtgcg gcaactcccc gtgccctgac 1801 ggtagcaata ctgctcaggt acggagagtg ggaccaactc gtttcactcc gagttgatcc 1861 catgcgctat gaccacgctg aatcctatta ccgtgatgcg gtcgtcactg aactccttag 1921 aaaagttcag ggactgccgc ttacggttaa ccttcacgag gaagctataa aaagtttctt 1981 tgagtcggag gcccagtgtt acaggaccaa tgaaaggttg tctccttatc tcgaaggggg 2041 ttcccacccc ctctatgatg agcgaatcgg gcgtatcgta cgcgcggctc ggaaaaagat 2101 gacccaaata attgggcggc ctgaaaaaac aaaccagggt cattttggcc ctggagcgac 2161 atttgccgat agaggagcaa acactactgt tgctcataaa atgtcatcga accccgtctt 2221 gacaactctt gctctacctt ttatgttcga ctgggtagat acgcaatggg cgaaagccgt 2281 tgctgcaaga gaagactcgt cttttagtat tgtgcggggt aaccgattca catcggtccc 2341 taaagattcc acgaaaaatc gtggcatctg catcgagcct agtgtaaact tatactatca 2401 gctcggtgtg ggtgcgatcc ttaagaagcg cctacgcgcg actgggattg aactcgcagt 2461 accggaaggt ccttatctcc cgaatggttt atcggggata attggactgg ctacaggaat 2521 cgacggacag gagcgtcata agcgtaaagc tcgtgacgca tccagctcgg gttcccatgc 2581 caccgtagac ttgtcctccg caagcgatac cgtttgtagc aatattgtca agttgctatt 2641 gcccgacgac tggtacgaga ttctctcgga ccttcggtca ccctacaccc tcatgggtga 2701 taattgggtg aaactagaaa aattctctag tatgggaaac ggttatacct tcgagctcga 2761 aactttgatc ttcctttgtc tgattatggg tttggcctcc gaaatggggt tggattacgt 2821 gattggcgag gatgtcttgg tgtatgggga cgacatcatt gtccccagcg agttcgcggg 2881 cgaaacgcta gctatgttaa agttttttgg cttcaccccg aacgaacgca aaacgttctg 2941 ttcgggccac tttcgcgaaa gctgcggtgg ggattacttc cagggggcca atgttaggcc 3001 ctataacttg gaaggagatc cgtgtgaacc acaagaactc attgcatacg ctaatggtct 3061 tgtccgactt ggtgatcgcg attttattag cgatcatttt cgtcggcatc ttaggcgggc 3121 ttggttttgc gtcctggacg ctataccgag ccatatccga aggtgtcgtg gtcctgaaca 3181 tctaggtgat atcgttatac acgatcatcc agactactgg ggctacttgc acgaccatgg 3241 agattcgcag atgagctgga tacgggttta tagaccggcg cgttttcgac gcgtcacctg 3301 ggataacttc acaggtcgag ttcagctagc atgcgcaacc ttgggctacg gagacggcac 3361 tttgggtatc atcccacgtg actctgtttc cggatacaag gttggacggg tgtcagtatc 3421 gtagggctgt gaaagcccga acccatctat aaactggtgg gatggtattg attttaaaag 3481 taatggaacc ttacactttg ggtttctggg //