LOCUS BK014117 3802 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage SRR5467090_12 genomic sequence. ACCESSION BK014117 VERSION BK014117.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage SRR5467090_12 ORGANISM ssRNA phage SRR5467090_12 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Alehxovirus; Alehxovirus asiovicinum. REFERENCE 1 (bases 1 to 3802) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3802) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry SRR5467090 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3802 /organism="ssRNA phage SRR5467090_12" /mol_type="genomic RNA" /isolation_source="activated sludge" /db_xref="taxon:2786450" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Alehxovirus; Alehxovirus SRR5467090_12" gene 73..1260 /gene="SRR5467090_12_1" CDS 73..1260 /gene="SRR5467090_12_1" /codon_start=1 /product="maturation protein" /protein_id="DAD52483.1" /translation="MPARTRTYQSPPLKGGRRFRKLFGTWQDQPYPIAPFTFKHVCSD VTGNRDGSNGLTIDKEQYGILPLNGFDSDQNEYQGWYPAGMMVLPAHMATAAPSTNEL INMLVTRSNPGRAEVSIPRAVAELRELPSLVRQGGDLYRRYFQSPMRRRDRDRLRHGL QAANDGQGIYLAYEFGVAPIISDMHKLLDFQARFDRRAKELARFFSNGGSKRRLQLGN YSATDTVNNVPVVSGAGGTWYARRTRTTRVDCWGTIRWRPAAGVAIPQTHAQLMHQAR RAVLGLGPTQLGDAWDIIPFSWMVDWFADVGNFLHTWNNRIPATMSNICVMRRSTTKF EFERLDHKEVKGGSGYTMRVTKTRHVGSSQAPITLNNNFMSTWRLSIVSALAATRHRR VAR" gene 1284..1661 /gene="SRR5467090_12_2" CDS 1284..1661 /gene="SRR5467090_12_2" /codon_start=1 /product="coat protein" /protein_id="DAD52484.1" /translation="MLGTSLTVTLDGSGGTAKVLPLINQDGYSAEYFLDDTTVTYRAK VRHSKDRVPAGSQAFDRHTVTFTRYTKPTEALPLGSLSEVSFTIRNDPNGVSSEIIDV SEAMSFYMVKAGGIAAKLLGWES" gene 1762..3744 /gene="SRR5467090_12_3" CDS 1762..3744 /gene="SRR5467090_12_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD52485.1" /translation="MKSYEHFFLGLYDAILSDVIDMYPTLRQSIGYDKARLLSLVEAR GLSFLTIDLPELGKHFEQCLASGTFTSPRLPGGTPGRRRGGIIPRLFSGIYLRIFDYS GMLRADADVHAIRVLRQLYYTAKKAKLECSDVRIQQAIAEFYSVDRGVRSSTLNWAED ELRGLGDDKIHFGYRRLNPHDDPSLLPQEAELGGPSSVSVDWERLNHIQVVCDIIATQ LGFFDPFEWRTKHGPGAVADLRSGFVSKYEFPCWPSKLETSFPIADFAFANYSLWADD VSRKDGHNGRFSHHEPPSRLISVPKTQKGPRLIAAEPTCYQWTQQSVKDFLTERVRRT SIDETVRFRDQTRNQSAALLASRDQSKATIDLSSASDRISCWHAERAFRRNNTLLRAL HATRTRWIENSIDSRSPRFHVLKKLSTMGSAVTFPVQTILFANIAVGALLHSRGLPVT TKTIRAASQEVRVFGDDIIVPTDVGASVLGALGDLGFKVNRSKTFVNGYFRESCGCDA YKGVDVTPTYTSTYPSRDRPESLVSSIAVRNNFYRNHYYKAAEYIQRTVMREAPFLKL PTVSPDSGTLGWIDYSPSPNHHLKSRRKLGDSVLEYQMHALKTRSRRLPDRESSRLLQ YFTEEPDPMLAWESGIPSRPKVLLNLRWEALDPGRR" ORIGIN 1 gacccataat gggtctctcc gtagtcgaag ttggctatta acatcccgtt acccaatgct 61 tgagcgcttc caatgccagc ccgtactagg acttaccagt ctcctccgct caaaggtggg 121 cgacgtttta ggaaactttt cggaacatgg caagatcagc catatccgat agctcctttc 181 acgttcaaac acgtttgttc ggatgttacc gggaatcgag atgggtccaa tggactcacc 241 atcgataagg aacagtacgg tatactacct ctgaatgggt tcgattcaga ccagaatgag 301 taccagggat ggtacccagc tggaatgatg gtcttacccg ctcatatggc taccgcagca 361 ccgtcgacta acgaattgat aaatatgctt gtaaccagga gtaatcctgg tcgagctgaa 421 gtatcaattc cgcgcgcggt ggcagagcta cgggaactcc cgtcgctcgt gcgtcagggt 481 ggggatttat accgtcggta cttccagagt ccgatgcgtc ggcgcgatcg tgaccgtctc 541 agacatggtc tgcaggcggc caacgacggc caaggcatct atctggcgta cgagttcggt 601 gtagctccca tcatctctga catgcataaa ttactggatt tccaagctcg tttcgatcgc 661 agagcgaaag aacttgctag gttcttcagt aacggtggaa gcaaacgtag actgcagctt 721 ggcaactact cagctaccga cacggtcaac aacgttccag ttgtttccgg tgccggtggc 781 acttggtacg cgcgaagaac tcgcacgacc cgagttgact gttggggcac cattcgttgg 841 cgtcccgcag ccggtgttgc tattccgcaa actcatgcgc agcttatgca ccaagcacgg 901 cgtgccgtac ttggtcttgg gccaacgcaa ttgggggatg catgggatat tatcccattc 961 tcctggatgg tcgattggtt cgcagatgta ggtaacttcc tacatacgtg gaataatcgc 1021 attcctgcta ctatgtcaaa catctgtgtg atgagacgta gtaccaccaa gtttgagttt 1081 gagcgccttg atcataaaga ggtcaagggc ggctcaggct acacgatgcg cgtgacgaaa 1141 actcgccacg tcggatcgtc tcaagcacca atcacgttga acaacaactt tatgtcaacg 1201 tggcgactgt ctatagttag tgcgctggct gctactaggc atcgccgagt agctcgttag 1261 agcctaacta caggatagaa gaaatgctag gtacctccct tacggttact cttgatggtt 1321 ccggtggaac cgccaaggtg ttgccgttga tcaaccaaga tggttatagc gccgagtact 1381 ttctcgacga tacgaccgtt acctatcgcg caaaagtgcg ccatagcaag gaccgtgtcc 1441 cggcgggttc gcaggcgttt gatcgtcaca ctgtgacttt cactcgctat acgaagccga 1501 ctgaggcact gccccttggt tccctctccg aggtgtcgtt cacgatcaga aatgatccga 1561 acggcgtctc atcggagatt atcgacgtgt cggaagccat gtctttctac atggtcaagg 1621 ctggcggtat tgccgccaaa cttctgggct gggagtcgta gactcctaag tccattccgc 1681 cgcgtaactt ctgctttgtg cagaagctta gggagtacat agccatagat cgttaaccac 1741 acctgtagta ggagtgacac gatgaaaagc tatgaacact tcttcctggg tctctacgat 1801 gccatccttt cggatgtcat cgacatgtac cctaccctaa gacagagtat tgggtatgat 1861 aaagcccgac tactctctct tgtcgaagca agaggtctct cgttcctcac gatcgacctt 1921 cccgaactag ggaaacactt tgaacagtgt ttagctagcg ggaccttcac ctcaccacgt 1981 ctgcctggtg gaacaccagg tagacgtaga gggggtataa tcccgagact tttctcgggg 2041 atatacctaa ggatcttcga ctatagtggg atgcttcgtg ccgacgcaga tgttcacgcc 2101 atccgtgtcc ttcgtcaact gtactataca gctaagaagg caaagttgga gtgttcagat 2161 gtcagaatcc agcaagcaat cgctgaattc tactccgtcg accggggagt ccgatcctca 2221 acccttaact gggcagagga cgagctccga ggacttggag acgacaaaat ccattttgga 2281 taccgtcgtc ttaatcctca cgatgatcct tcccttcttc cgcaagaagc ggaattaggt 2341 gggccatcgt ctgtctccgt tgactgggag cgacttaacc atatacaagt cgtatgtgat 2401 ataatcgcca cccagctggg attcttcgat ccctttgaat ggagaacaaa gcatggacca 2461 ggtgctgttg ccgacctacg tagtgggttc gtatcgaaat acgaattccc ttgttggccg 2521 agcaagctcg aaacatcttt tcctattgcg gacttcgctt tcgcgaacta ttcgctatgg 2581 gcagacgatg tttctcgtaa ggacggacat aacgggagat tctcccatca tgagccacct 2641 tctcgactca tatctgtacc aaagacgcag aaaggcccac ggcttatcgc cgcggaacct 2701 acttgctatc aatggacaca gcagagcgtt aaggatttcc ttactgagcg agtacgaagg 2761 acctcgattg atgagactgt tcgctttcgc gaccaaactc gcaatcagtc cgccgcactc 2821 ctcgcttccc gagatcagag caaggcgacg attgacttgt cgtctgcttc tgatcggatt 2881 tcgtgttggc acgctgaaag agcttttaga aggaataata ccctcctcag agccttacat 2941 gcgacccgta cgagatggat tgaaaattcc atcgatagta ggtctccaag atttcatgtc 3001 ttgaagaagc tatcaaccat gggaagtgct gtcacctttc ctgtgcagac gatcctgttc 3061 gctaatatcg ccgtgggcgc tctcctacat agtaggggat tgcctgtgac gaccaaaacg 3121 atcagggcgg ctagtcagga ggtccgagtc tttggagacg atattatcgt ccccactgac 3181 gtgggtgcct ctgtattggg agcactaggc gaccttggat tcaaggtcaa ccgatcgaag 3241 actttcgtaa atggttattt tcgagagtct tgcggttgcg acgcgtacaa gggtgtcgat 3301 gtgacaccta cgtatacgtc cacctaccca agtagagaca ggcctgagtc ccttgtgtca 3361 tcgatcgctg tacgtaataa tttctatcga aatcattact ataaagcggc cgagtacata 3421 caaaggacag tcatgcggga ggctcctttc ttgaagttgc ctaccgtatc accggactca 3481 ggtactcttg gctggataga ttacagtccg tcacctaacc accacctcaa gtcgaggagg 3541 aagctcggtg actctgtact cgaataccaa atgcatgcgc ttaaaacgcg tagcaggagg 3601 cttccagaca gagagagctc gaggttactt cagtacttca ctgaagagcc cgaccccatg 3661 cttgcatggg agtctggcat accctcgagg cctaaggtct tacttaacct taggtgggaa 3721 gccctagatc ctgggcgccg ttaggcgccc agcatactag gcactttgta ggtttaatcc 3781 tactgaaggg gtacactttg ct //