LOCUS BK013661 3858 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage SRR5467091_1 genomic sequence, sequence. ACCESSION BK013661 VERSION BK013661.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage SRR5467091_1 ORGANISM ssRNA phage SRR5467091_1 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Rainacovirus; Rainacovirus pelocola. REFERENCE 1 (bases 1 to 3858) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3858) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry SRR5467091 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3858 /organism="ssRNA phage SRR5467091_1" /mol_type="genomic RNA" /isolation_source="activated sludge" /db_xref="taxon:2786459" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Rainacovirus; Rainacovirus SRR5467091_1" gene 36..1319 /gene="SRR5467091_1_1" CDS 36..1319 /gene="SRR5467091_1_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50906.1" /translation="MRTTYPLTKSYEDRLTFTQQRRTRTTSLSLGLCKPEVKDVSTRL VVLPNEVYLGASPNSWRDNLRRGTSATSTLHGYRYTLKGGHGMIGVYGSGNPGDPNGC YVREDSEAPLCVYRGNVRAPLDETLSLLADDKARSNLLSKYLKVRKTFRGGNFIAEFR ETVQMMKRPVKALEGGFKKFAAEVKKGRGIKGKRRYASMLSDAWLSWTLGWSPLFSDV HDAAEALARLSTSNRFDGKRITGVGMDETSICHNPGNYNAYILLNRVDRLSSMVKYVA MIKARPDKFLTFADSFGITPGDVIPAVWEAIPWSFLIDYFVNVNEVLDGMQWASGDVA WVNCGVKNDNEIVYSVAPGNLPSGLHTQITCTPLRLNTVYKSRFASGIPYPRFHFKIP GIRGDINIAALWASAWSSRPVGYDVRKGLKKPKGW" gene 1355..1825 /gene="SRR5467091_1_2" CDS 1355..1825 /gene="SRR5467091_1_2" /codon_start=1 /product="coat protein" /protein_id="DAD50907.1" /translation="MSIGITSPITGSAQTGLTSPTYTVANDVAPPGNPGKQVAVTALG GTQTGVTVHSVAAPFTCNFTRPGNLRVLGSPNPVTGVVNLVPMNTYKLITRKGVTPLA GQPIKVMNITTTCDVPAGADVADPANVRAAFSLHIGALNQQSAGFGDLAISGIL" gene 1836..2099 /gene="SRR5467091_1_3" CDS 1836..2099 /gene="SRR5467091_1_3" /codon_start=1 /product="hypothetical protein" /protein_id="DAD50908.1" /translation="MELTFEFDRLIAEDLNVVRNLNCDLRSRQPWVASSSFRVIATVY PTGEIGIEHQDDDGVPYVAVLGRVRDSFFSGGCNIRLGSMSGE" gene 2131..3840 /gene="SRR5467091_1_4" CDS 2131..3840 /gene="SRR5467091_1_4" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50909.1" /translation="MHLSADVLFSKLQTDLGYKIDTGLPGWSIDSTVEEVCCYSLLGS LLKKFVEGDSPAPQACASALDKFLAVNKRCAEWELQLEFTKDAEVLGLIKQELEDFWY ADGCTPLIEDIRACFFDGRAGPGASIKALGTDFYTKMFSGPLSATSGLPEIWERCVTA DDRFFLAEARRASIYGTTVVASSNYSFVNKTTTIARGICTEPSINMWMQLGAGAILER RLKSFFGIDLAKQPDLNRRLAQRGSVDGSVSTIDLESASDSLGLKMLRTILPKGMMDI LCIFRCPKTKLPTGSELVLNMISTMGNGYTFPLQTVVFSSVVRAVARWHGVRLTRDTF GVFGDDIICPTEISRDVIRALNMLGFVVNHSKSFVEGPFRESCGADWFRGVNVRGVYI KRLNSVQDTYVAINSLNLWSARTGVALNHTVTYLYESLRGKSEVPLDEGFDTGVWVPN AYRTRKVTAAKGRLQAYVAWKAEPDRFYITDGYCWTFKHQRMRDYNPCGLLLALLGGY IRGYKVSVRRRKTLYVKKRLTTPCWDRWVPAEVSDPRGSVSLRQFVSAWHWNLLGSSA LPG" ORIGIN 1 gggctagcaa cctgtaaaaa caccaggagt acccaatgag aactacgtat cctctcacaa 61 agagttatga ggatcgtctg actttcacgc aacaacgtcg tactcgaacc acgtctctca 121 gcctagggct ttgtaaaccc gaagtgaagg acgtctcgac gcgactggtt gttttgccaa 181 atgaggtcta cttaggggcc tctccgaatt cttggagaga caacctcaga cgagggactt 241 cggcaacttc aaccttgcat gggtatcgtt acactctaaa gggtggccat ggtatgatcg 301 gagtttatgg ctccgggaat cctggcgatc ctaatgggtg ctacgtgcgg gaggactcag 361 aagcgcccct ctgtgtttat agagggaacg ttcgtgctcc acttgatgag actctttcac 421 tccttgcgga cgataaagcc cgctctaatc tgttatctaa gtacctaaag gtccgcaaga 481 ccttccgtgg tggaaatttc atcgcggagt tcagggaaac ggtgcagatg atgaagcgtc 541 cagtcaaggc tctcgaaggc ggatttaaaa agttcgctgc cgaggtcaag aaaggacggg 601 gtattaaggg caaaagacgc tacgcgtcca tgctctctga tgcctggctt agctggacac 661 tcggttggtc accgttgttc agtgacgtgc acgatgccgc agaagctttg gctaggttat 721 ctactagcaa tcgtttcgac ggtaagagga taaccggggt ggggatggac gaaacatcca 781 tttgtcacaa cccgggtaac tacaacgcct atattttgct aaatagggtt gacaggttat 841 cgtccatggt taaatacgtg gcgatgatca aagcacgtcc ggataagttt ctcactttcg 901 cagattcgtt cggtattacg ccgggcgatg ttatacctgc ggtgtgggaa gcgataccgt 961 ggtcgttcct tattgactac ttcgtgaacg ttaacgaagt tctcgatggg atgcagtggg 1021 cgagcggcga cgtcgcctgg gttaactgcg gagtcaaaaa cgataacgaa atcgtttact 1081 ctgtagcccc tggtaacttg ccgtctgggt tacacaccca gatcacttgc actcccttac 1141 gcttgaatac ggtttataag tccagattcg cttctggcat tccgtaccct cgcttccact 1201 ttaagatacc gggtatcagg ggcgacatta acatcgccgc cctttgggca tccgcgtggt 1261 cttcgagacc tgtaggctac gatgtccgta aaggactgaa gaagccgaaa ggttggtagt 1321 ggttttcctt tcatcctcca tttaggtgat atatatgagt atcggtatta caagtccgat 1381 cacgggcagc gcacagactg ggctgaccag cccaacctac actgtcgcga acgacgtcgc 1441 cccaccggga aatccgggaa aacaagtcgc cgtcacggca cttggtggta cacaaactgg 1501 cgttaccgtc cactctgtgg ccgcgccgtt tacctgcaac ttcacccgtc ctgggaatct 1561 ccgagttttg gggtccccca atccggtcac tggagttgtc aatctggttc cgatgaacac 1621 ctacaaactt atcactcgta agggtgtcac ccctttggcc ggacaaccga tcaaagtgat 1681 gaatatcacc actacctgtg acgttcctgc aggtgcggat gtagcagacc ctgccaatgt 1741 tcgggcagcg ttctcgcttc acatcggcgc tcttaaccag caatccgctg ggttcggaga 1801 tctcgcgatc tccggcatcc tctaaggaga ggatgatgga gcttacattt gagttcgatc 1861 ggcttatcgc cgaggacctg aatgttgtaa gaaacctgaa ttgcgacctt cgcagccgtc 1921 aaccatgggt tgcgtcctcg tcattccgtg ttatcgctac cgtctaccct accggggaga 1981 ttggtatcga gcaccaggat gatgacggcg tgccttatgt tgcggtgctg ggtcgtgttc 2041 gggactcttt cttctcgggc gggtgcaata tccgccttgg aagtatgagc ggggagtaat 2101 ccccttactt aaccagatag gagtaccacc atgcacctta gtgctgatgt tcttttctcc 2161 aaactacaga ccgaccttgg ttacaagatc gataccggct tgccgggatg gtctatagac 2221 tctactgtcg aggaggtgtg ttgttatagc ctcctaggaa gcctccttaa gaagtttgtt 2281 gagggggatt ctcctgcacc acaagcctgc gcctcagctt tggataaatt cttagctgtt 2341 aacaagcgtt gcgctgaatg ggaactccag ttagagttta cgaaagacgc agaggttctt 2401 gggctcatta aacaagagct tgaggatttt tggtacgctg atggctgcac gcctctaatc 2461 gaggatattc gtgcatgctt tttcgacggt agggctggcc ccggagcaag tatcaaggct 2521 ctgggtaccg acttctatac gaagatgttc agtggacctc tctctgcgac aagcggtctc 2581 ccggaaattt gggagcgttg tgttacggcg gatgatcggt ttttcctggc cgaggccagg 2641 cgagcatcta tctacggcac aactgttgta gcgtcaagta actatagctt cgttaataaa 2701 acgacaacta tcgcgcgagg catctgtacc gagccgtcca tcaatatgtg gatgcaactc 2761 ggtgccggtg ctatcctgga gagacgttta aagtccttct ttggaataga tctggccaaa 2821 caaccagatc tcaatcgccg attggctcag cgcggttctg tagatggcag tgtatcgacc 2881 atcgacttgg aatccgcgtc ggactctctg ggtctcaaga tgcttcgtac catactcccg 2941 aaagggatga tggacatact ttgcatcttt cgttgcccca agacgaagct accaacaggt 3001 agtgagcttg tgttgaatat gatctcaacg atgggaaatg gttatacatt cccattgcag 3061 acggttgtat tctcctcagt tgttagagct gtggcgcggt ggcacggggt taggttgacc 3121 cgtgacactt tcggggtctt cggggacgac atcatatgtc ccactgagat ctcgcgcgat 3181 gtaatccggg ctttaaatat gctcggcttc gtcgtgaacc actccaagtc ctttgttgag 3241 ggaccgtttc gtgaatcctg cggcgccgat tggtttcgcg gcgtcaatgt taggggcgtc 3301 tatataaaac gcctcaacag cgtgcaggac acgtatgtag ctatcaacag tttgaacctg 3361 tggtccgcaa ggaccggtgt ggctttaaac cataccgtta cttatctata tgaatctctc 3421 cgcggtaaga gtgaggttcc tctagatgag ggctttgaca caggcgtctg ggtcccgaac 3481 gcataccgta cccgaaaggt gacggctgct aagggccgcc tccaggccta tgtggcgtgg 3541 aaagcggagc ccgatcggtt ttatatcacc gacgggtatt gctggacctt caaacaccag 3601 cgtatgcggg actacaaccc ttgcgggttg ctactcgcat tgttgggcgg ctacattagg 3661 ggatacaagg tctccgtcag gcgacggaag actttgtacg ttaagaagcg cctcaccacc 3721 ccttgctggg ataggtgggt ccccgctgag gtatcggacc ctcgtggatc cgtatctctc 3781 aggcagtttg tttctgcctg gcactggaat cttttaggct ccagtgcttt accgggttaa 3841 tttccgggca agtgaacc //