LOCUS       BK013658                4194 bp    RNA     linear   VRL 09-FEB-2021
DEFINITION  TPA_asm: SsRNA phage SRR5467091_16 genomic sequence.
ACCESSION   BK013658
VERSION     BK013658.1
KEYWORDS    Third Party Data; TPA; TPA:assembly.
SOURCE      ssRNA phage SRR5467091_16
  ORGANISM  ssRNA phage SRR5467091_16
            Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes;
            Timlovirales; Steitzviridae; Jiforsuvirus; Jiforsuvirus
            asiadaptatum.
REFERENCE   1  (bases 1 to 4194)
  AUTHORS   Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H.,
            Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C.
  TITLE     Leviviricetes taxonomy
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4194)
  AUTHORS   Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H.,
            Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland,
            Western Road, Cork T12YT20, Ireland
COMMENT     THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from
            DDBJ/EMBL/GenBank entry SRR5467091
            
            ##Assembly-Data-START##
            Assembly Method       :: metaSPAdes v. v3.11.1
            Sequencing Technology :: Illumina
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..4194
                     /organism="ssRNA phage SRR5467091_16"
                     /mol_type="genomic RNA"
                     /isolation_source="activated sludge"
                     /db_xref="taxon:2786466"
                     /country="USA"
                     /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota;
                     Leviviricetes; Timlovirales; Steitzviridae; Jiforsuvirus;
                     Jiforsuvirus SRR5467091_16"
     gene            190..1539
                     /gene="SRR5467091_16_1"
     CDS             190..1539
                     /gene="SRR5467091_16_1"
                     /codon_start=1
                     /product="maturation protein"
                     /protein_id="DAD50895.1"
                     /translation="MTVSFRIRGGQKPSYRYTVGNNLTTTSDITGSYDVGYIVEKLTS
                     EKHIFANRPHKLSKWEKRYLQYYGKRDFGGPFSVQRRAAQVAPAFIQYASSNPSHVGS
                     WWDFRGYLVPSKAPLGLPAPSSVPPLISATLMRGKGIEGWNKWKPTATQVNTGQALGE
                     LRSIGGLPVSPKMIQELRELGRVLRHPLQTLRHATRTGIPGHDALRYAGSGYLGYQFG
                     IKPYVQDIMATTKAVLDFDKNLRQLVRDNGRPVRRKGRVSLTETSSTVHTQSSTLGGM
                     CRPSLATQLHDGIQQMDVTTAISLEFWFSGRFRYHLDPFREHGLGPIPDREKYQLQRI
                     LYGIDPTDVTLIWELMPWSWLIDWIVPIGPMINNLVNDQTDRLVADYAYIMGHSMSSE
                     STVVRGKLKNSGPFTSTCFVYDEIKQRAVASPYGFGVSFTGFSPKQLAILAALGVSR"
     gene            1604..1963
                     /gene="SRR5467091_16_2"
     CDS             1604..1963
                     /gene="SRR5467091_16_2"
                     /codon_start=1
                     /product="coat protein"
                     /protein_id="DAD50896.1"
                     /translation="MLADPQSVTINAVAQSLPAIARGVNTSTYQKDDGTVKLSISHQY
                     GKRTRRTARLDFSKIVADPLVPATNQKVSMSAYLVIDHPLTGLTNAEIKQVVDGLTAY
                     LTASSGAKVTSMVAGES"
     gene            1979..2080
                     /gene="SRR5467091_16_3"
     CDS             1979..2080
                     /gene="SRR5467091_16_3"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="DAD50897.1"
                     /translation="MRIIDILFILALGCIPGVIALAFFLGRSYSPVV"
     gene            2145..4097
                     /gene="SRR5467091_16_4"
     CDS             2145..4097
                     /gene="SRR5467091_16_4"
                     /codon_start=1
                     /product="RNA-directed RNA polymerase"
                     /protein_id="DAD50898.1"
                     /translation="MKSLMRLLECVLADAGTWCSTSTTRDFETVTRRVEHEGISFITI
                     TLPVFCQDFESCLDIGRVDSSFFLGFKRNGALPAFLQGLLSQVFDASDGTLLEEVNHL
                     AVHAVRQICLLNKKVLLPCSKERERKAFDSYLETDRSVLAFENSLSKFWTSSPEDDQG
                     ASNARASTGFSHSRENSDRGSSGSGSSDTSPSSILGDKTPIEFSHFSEVSNLLWGSLF
                     TADSFRVDSRRVLPKHGPGSTAERLPSNRRFSLPVWHRRLDHWFPAADFVIPNSGYID
                     RLDGVQFVDPEQERPVRVITVPKTLKGPRIIAIEPACVQYTQQAILEILVDRLENYRF
                     TSGSVNFSDQTENQRMALSSSKTGRFATIDLKDASDRVSSRLVWQMLERQPIFRSMVF
                     ACRSTRAEVPGHGIHTLSRFASMGSALCFPIEAMVFYTIVLSAILRAEGSRLTPNSLV
                     KAKRSVRVYGDDIIVPVEYVQAVKRELEWFNLRVNDRKSFWNGKFRESCGLDAYDGTP
                     VTPVYVRRNLPASHRDSEELVSAVSLGNQLYEAGYWRSATYVRSVIDRLATVPYVSKN
                     SSILGWTSYYTNYEIQGWDENLHRYLVKGNVVSSKLRHDHLDDYGALMKFFLKRGSDP
                     YFDAKHLERYGRPLVVYTKLRWAPPY"
ORIGIN      
        1 ggctcccgaa agggagcccg tgctttagtg caacaccacg caggtatcac tatcaagtga
       61 ttgcggaacg tgattagccg gttcgctacc ggggaggcac gttccgtcct gcggcctact
      121 caagtaggtc cgaagaattt ggacattaga atccatatct tcttctttcc tccataaggg
      181 actttgtcaa tgactgttag ctttcgtatc agagggggcc agaaaccatc ctatcgttat
      241 acggttggaa acaacctgac aacgacttcg gatattactg gctcctatga cgtcggctat
      301 atagtcgaaa aactcacctc tgagaagcat attttcgcaa atagaccgca taagctgtct
      361 aaatgggaaa agcgttacct ccaatactat ggaaaacgcg atttcggtgg acctttctcg
      421 gttcaacgaa gagctgctca ggtcgcccct gctttcatac aatatgcaag cagtaacccg
      481 tctcatgtag gatcctggtg ggactttcgt gggtacttag taccttcgaa ggcgccgctt
      541 ggcctacctg cgccgagttc tgttccccct ctaatctctg caacgcttat gcgaggcaaa
      601 gggatcgagg gttggaacaa gtggaaaccg actgctaccc aggttaatac tgggcaagct
      661 ttaggtgagt tgcgctcgat cggcggattg ccggtatctc ccaagatgat tcaggagctt
      721 agagagctcg gtagagttct gcgacacccg ttgcagactc tccggcacgc tacgcgtact
      781 ggtatacctg gtcatgacgc tttgcgttat gcaggatccg gttacctggg ttatcaattt
      841 gggattaaac cttacgttca agatatcatg gccaccacta aggcggttct tgatttcgat
      901 aagaacttac gacagctcgt tagagataac gggcgtccag ttcgacgtaa gggtcgagtg
      961 tcattgacag agacgagtag cacggttcac acgcagtcct ccactcttgg tggaatgtgt
     1021 cgtccgtccc ttgctactca actccacgat ggcatccaac aaatggatgt gacaacggcg
     1081 atctccctag agttttggtt ctctggtaga tttcgctatc acttggatcc tttccgtgaa
     1141 cacggattag gacccattcc tgatagggag aaatatcagt tgcaacgtat actttatggt
     1201 atagatccaa ctgacgtcac cctcatttgg gaattgatgc catggtcctg gctgatcgat
     1261 tggatagtgc ccattgggcc tatgatcaat aacttagtta atgatcaaac cgatcgcctt
     1321 gtagcagact acgcgtatat catgggacac tcaatgtcct ctgaatccac tgtagtcagg
     1381 ggtaaactga agaactcagg ccccttcacc tcgacttgtt tcgtctacga cgaaatcaag
     1441 caacgagctg ttgctagccc ttatggtttt ggcgtgtcgt ttacgggttt tagtccgaaa
     1501 caactcgcca tcctagctgc tctcggcgta agtcgatagc ctaggaaatg cccccttaca
     1561 tattgtgtgt gtggggaaac ctcctaaatc aaggaatcgt gccatgctgg ccgaccctca
     1621 atctgtcact atcaatgcgg tagctcaatc gctacccgcc attgcccgtg gcgtcaacac
     1681 ttccacttat cagaaagatg atggaactgt taaactgtcc atttcccacc aatacgggaa
     1741 gcggactcgt cggactgcgc gcttggactt ctccaagatc gtagccgatc cgcttgtgcc
     1801 tgcaacgaac cagaaggttt cgatgtctgc atatctcgtt attgatcatc ccctcacggg
     1861 tctgaccaac gccgagatca agcaagtcgt tgatggcctc acggcctatc tgactgcttc
     1921 tagcggtgcc aaggtgactt ccatggtcgc tggtgaatcg taattcgagg atcgcgcaat
     1981 gcggatcatc gatatccttt tcatcctcgc ccttggttgc atacccggag taattgctct
     2041 ggccttcttt cttggccgta gctattctcc tgtggtgtga aggcagctga ggtcgcacat
     2101 ggctatggat gcttgagccc ccaatcatta gattaggagt aagcatgaaa agccttatgc
     2161 gattacttga gtgtgttctc gcagatgcgg gaacatggtg tagcactagc accacccgtg
     2221 actttgaaac agtcacgaga cgtgtcgaac acgaaggtat atcgtttatt acgattaccc
     2281 ttccggtttt ctgccaggac ttcgaaagtt gtcttgacat tggccgggtt gactcatcgt
     2341 tctttcttgg tttcaagagg aacggggctc tccctgcgtt tttgcaaggt ttgctcagtc
     2401 aggtgttcga cgccagtgat ggtaccctgc tcgaggaagt gaatcacctt gcagttcatg
     2461 cagttcgaca gatctgcttg ctcaacaaga aagttttact tccatgttca aaagaacgtg
     2521 aaaggaaagc ctttgattca tacctcgaga ccgacaggtc agtccttgca tttgagaact
     2581 ctctatccaa attctggact tctagtccag aagatgatca gggagcttcg aatgcccgtg
     2641 cctctaccgg cttctctcac tcaagagaga attctgatag aggatcttct ggaagtggaa
     2701 gtagtgatac ttccccttct tcgatcttgg gagataaaac tccaattgaa ttctctcact
     2761 tctcagaagt gtcgaatctc ctttggggtt ctctcttcac tgccgattcg tttcgagtcg
     2821 actctagaag agttctacct aagcatggac ccggttcaac agctgaacgt cttccatcta
     2881 atagaagatt ttcattgcct gtttggcacc ggaggcttga ccactggttc ccagctgcgg
     2941 actttgttat ccctaattca ggatacattg accgactaga tggagtccag tttgtcgacc
     3001 cggaacagga acgcccagtt agggtcatta ctgttcctaa aacgctgaaa ggccctagga
     3061 tcattgcgat tgaacctgca tgtgtgcaat acacacagca ggccattctg gaaatcctag
     3121 tagatcgtct ggagaattac agattcacta gtggatctgt taacttctcg gatcaaaccg
     3181 agaaccagag gatggccctt agctcctcta agactggtcg ttttgcaacg atcgatctaa
     3241 aggatgcttc ggaccgcgtt tcatcccgcc ttgtctggca gatgcttgaa cgtcaaccga
     3301 tatttcggtc gatggtcttc gcttgccgtt cgactcgtgc ggaagttcct ggacacggta
     3361 ttcatacctt gtcccggttc gcgtctatgg gttcagctct atgtttcccg attgaggcaa
     3421 tggtattcta taccatcgtt ctcagcgcaa tccttagagc tgaagggtcc cgtctaactc
     3481 ctaattcgct tgttaaggcg aaaaggagtg tgcgtgtcta cggtgacgat atcattgtcc
     3541 ccgtagaata tgtgcaagct gtgaagcgtg agctcgaatg gtttaatctt cgagtaaacg
     3601 accgcaaatc attctggaac ggaaagttcc gtgaatcttg tggcctggac gcctacgatg
     3661 gtactccggt aacaccggtt tacgtacgta ggaatttgcc agcttcacac cgtgactccg
     3721 aagagctcgt tagtgctgtc tctctcggta accagcttta cgaggctggt tactggagat
     3781 ccgccactta cgtgcgttcc gtaatcgatc ggcttgctac cgttccttac gtatcgaaaa
     3841 actcttccat actcggttgg acttcgtact atactaatta cgaaatccag ggctgggatg
     3901 agaatttaca ccgttacctt gtgaaaggca acgttgtctc ttccaagctt cgccatgatc
     3961 atctagatga ttatggtgcc ttgatgaagt tcttcctcaa acgtgggagc gatccctact
     4021 ttgatgcgaa gcacttggaa cgttacggac gtcccttagt cgtctacacc aaactaaggt
     4081 gggcaccccc gtactaagta cggagggtag gtgatgggta taagaaagct ctttccttaa
     4141 tcggaaatct ttcttccatc tagagaggac tagtgtatct ctccaagaga ggtg
//
