LOCUS BK013592 3948 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage SRR6960799_11 genomic sequence, sequence. ACCESSION BK013592 VERSION BK013592.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage SRR6960799_11 ORGANISM ssRNA phage SRR6960799_11 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Piponevirus; Piponevirus borborocola. REFERENCE 1 (bases 1 to 3948) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3948) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry SRR6960799 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3948 /organism="ssRNA phage SRR6960799_11" /mol_type="genomic RNA" /isolation_source="activated sludge" /db_xref="taxon:2786567" /country="Japan" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Piponevirus; Piponevirus SRR6960799_11" gene <1..1509 /gene="SRR6960799_11_1" CDS <1..1509 /gene="SRR6960799_11_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50667.1" /translation="APQGALVTAKTTAGWIWDYQSHLAISSRAFATHVAAGGRSSYSL NSEVNMKTQKDLNTTNYTDVYVHHQREGNYPADFGTYHSGTNYEVRVLTRSTGIWKPG GGRKPEQPYQNTRIQYRVPHGKVVAYERNRGYGEGRHVFNGSVGTFFQDGFIGTLVPA HHGGSVASFPDISSLGVNPDLLSQAEVKCYNKLDALPRGSALFDAAVAAGERRETARM LMSAVYGTLNLARAVHGIGGRGRQWEWGVSEVLKDAFGVNVHPARLRRRYQNRLRKLK KSTLAGEITRGVATASLMADMWLTYRLGVTPLMSELDGLYNIVKHQPADPSNFTFKVT ARHYRERASMQQRGTDYKSSGRQEFYASELHGYTVTLVAAPTEAVTDTLSQLGLDNPA GTIWELTTLSFVVDYFVNVGSFLQALNVPKRFKFVDGSWTQRIVRTYSTSMIGPEANA RGVATCDHTRRFVYEQFPVPIPPLSLNGEDLTAKRFLTMAALAVVKLRKLLQ" gene 1541..1933 /gene="SRR6960799_11_2" CDS 1541..1933 /gene="SRR6960799_11_2" /codon_start=1 /product="coat protein" /protein_id="DAD50668.1" /translation="MPISINDGKASPVAHVFSQDREQQGATPALFVNRANTDGPMSWE TIESHTRLAVKSTDEHVTRHVFKIPKIGTKDGAPYVIGYRKVFVTVASNQAVSSEDDL ADAYALAANWLANASVKTAGKKLQPFTG" gene 2048..3898 /gene="SRR6960799_11_3" CDS 2048..3898 /gene="SRR6960799_11_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50669.1" /translation="MGTSKPRNSRGPNSAVSLDLQDFTRRFFDALDADGAFTGPGPVE LTRMGYRPAAERFAVTYIADEMFSKYDDGKPSAQKRAKAVERFLQAEHQCALVNQKLE PSAIGQEPWWMDERSDADDDLVVVGLVLKRARSLISRVLGAFPGWVKVMENANFGPGA TTRLPRAKGHHAYKWANNSQVTRAASSPLREIMAEMPGFTSVLLEERSTHEIVLGNKL DWVAKNYKTDRTIAIEPCWNMFLQKGVGTLIRRRLKRVGIDLDDQTTNQLLACIGSIT GELATIDLSMASDCVAYRLAEFVIRPDWFEAIATLRSPVGFYTLDDVDHCIVYEKLSS MGNGNTFEVETLIFWGIARAVSELIGCADHRLSVYGDDIIVPSGIADEVCNILKQVGF VTNSDKTFTSGPFRESCGAHWFQGVDVKPFYVREAVDSLDRLFLLHNNVCRWFQQNPD ICNPDEVDRLLHWIRSHAPKEWRKPSLLSLQQGDGGFFGTFTQVRPRKPGVKKFGWDG WVTDVLLFRSKYDKPAPSRVDLTEDDERNSWPLLSKPDWASLWRLEWAQARWYHGRIP ASMWSRWEPSFLSALGRLQKAAADVPYQERYWYEGTLVTPSHAVESVWWA" ORIGIN 1 gccccgcaag gggcactggt gacggctaaa acaacggccg gctggatctg ggactatcag 61 tcccatcttg ctatcagctc acgcgcattt gcaacgcacg tggcagcagg gggtcgtagt 121 tcttactccc tgaacagcga ggtaaatatg aagacgcaga aagacttaaa cacgaccaat 181 tacacggatg tgtacgttca ccaccaacgg gaaggaaact acccagcgga tttcggtacg 241 taccattcgg gcacgaacta cgaggtcaga gttttgaccc gttcgaccgg tatatggaaa 301 cccggaggcg gtcgtaagcc agaacaaccc tatcaaaata cccgcattca gtatcgtgtt 361 ccacacggca aagtcgtggc atacgagagg aatagggggt atggggaagg caggcatgtc 421 tttaatggat cggtgggcac atttttccag gatggattta taggcacact cgtccctgcg 481 caccatggtg gttctgtggc atcgtttcct gatatcagca gcctcggggt aaacccggat 541 ctcctgagtc aggcggaagt caagtgttac aataagcttg acgcactccc gcgaggaagt 601 gcactgttcg atgctgcagt agcggctggc gaaaggcggg aaactgcccg tatgctcatg 661 tccgcagtct atggtaccct gaaccttgct agagccgtcc atggaattgg aggacgggga 721 aggcaatggg aatggggcgt ctcagaagtt ctgaaagacg cgtttggagt aaatgtgcat 781 ccggcaagac ttcgccggag gtaccagaac cgtttgcgaa aactcaagaa atccaccctt 841 gcgggtgaaa taacgagagg tgtcgcgacg gcttcactta tggctgatat gtggttaacg 901 tatcgtctag gtgttactcc tctaatgtcc gagcttgatg gtttgtataa catcgttaag 961 caccaacccg ctgatccttc aaactttacg tttaaggtca ccgctcgcca ctatcgggag 1021 cgtgcatcca tgcaacaacg tggaacggac tataagtcta gcgggcgtca agagttctat 1081 gcatcggaac tccacggcta cactgtgact ctagttgccg cgccaacaga ggcggtaaca 1141 gatacattgt cacaactcgg gcttgacaac ccagccggga cgatctggga actcaccact 1201 ctcagttttg tcgttgacta cttcgtcaat gtcggcagct tcctccaagc gcttaatgtg 1261 cctaagaggt tcaagttcgt cgacggcagt tggactcagc gtatcgtgcg tacatatagc 1321 acgtctatga tcggacctga ggccaatgct cgtggagtcg caacctgcga ccacacgaga 1381 cggtttgtgt acgaacagtt tcccgtaccc atacctcccc tgtcactaaa cggtgaagat 1441 ctcactgcaa agcgcttcct aactatggcc gctttggccg tagtgaagct caggaaactc 1501 ctacagtagt acctatcccg cccaaaggag ggcatcggtt atgccgattt caatcaacga 1561 tggtaaagct tcaccggtgg ctcacgtttt cagccaagac cgggaacaac agggggcaac 1621 ccctgcgctg tttgtgaacc gcgcgaacac ggatggaccc atgtcatggg aaaccatcga 1681 gtcgcacacc aggctcgcag tcaagtcgac tgacgagcac gtcacgcgcc acgtcttcaa 1741 aatcccaaaa atcgggacca aggacggagc tccgtacgtg atcggatacc gaaaggtatt 1801 cgtgacggtg gcttcgaatc aggccgtcag cagtgaggat gacctcgctg atgcctacgc 1861 tctggcagcc aactggctgg ccaacgcgtc ggtgaagacg gctggtaaga agctacagcc 1921 gttcacgggt taactatccc gtgggcgtgt ctgttgctaa gttgcagggg actgtctcag 1981 tatcatctag gcagattctt atttctcctg ttgttttcct cggatggtgt ttcctaggag 2041 tacttatatg ggtactagta agcctcgtaa ttctcggggc cctaacagcg cggtctcact 2101 tgacctccaa gactttacac ggaggttctt cgacgccctc gacgcagacg gtgccttcac 2161 aggccccggc cccgtcgagc tcacacggat gggttaccgt cccgctgcag agcggttcgc 2221 ggtaacgtac atcgctgatg agatgttctc gaagtatgac gacgggaaac cgtcagctca 2281 gaaacgagcc aaggctgtcg agcgttttct tcaagccgaa caccagtgtg ctctagtgaa 2341 tcaaaaacta gagccgtccg ccattggcca agagccgtgg tggatggacg aacgcagtga 2401 cgcagatgac gaccttgtgg tcgtcggcct cgttcttaaa cgggcccgaa gtctgatcag 2461 ccgcgtcctg ggagctttcc caggctgggt taaggtgatg gaaaacgcca attttggtcc 2521 cggggcaacc accaggttac ctagagccaa aggccatcat gcttacaagt gggctaataa 2581 ctcacaagta acacgcgctg catcaagtcc gctccgtgag atcatggcag aaatgccagg 2641 atttacctct gtccttttgg aggagcggtc cacgcacgaa atcgtgctag gaaataaact 2701 tgattgggtt gcaaagaact ataaaactga ccgcacgata gctatcgaac cttgctggaa 2761 tatgttcctc cagaagggtg taggtacgct cattaggcgt aggttgaaga gagtggggat 2821 cgacttggat gaccaaacaa caaaccagct gcttgcctgt attggaagca ttactgggga 2881 gttggccacg attgatttgt cgatggctag tgactgtgtc gcttataggt tagctgagtt 2941 cgtgatccgc cccgattggt tcgaagcgat tgctacgctg agatctcctg tcggattcta 3001 tactctagac gatgtcgacc attgtatcgt ctacgagaaa ttatccagta tgggtaatgg 3061 gaatacgttc gaagtcgaga ccctgatttt ctggggtatc gctagggcgg tttctgagct 3121 catcggatgt gcagaccatc gactttcggt ctacggagat gacattatcg tgccatccgg 3181 catcgctgat gaagtctgta atatcctgaa acaggtgggt tttgtcacga acagtgacaa 3241 aactttcact agtggtccgt ttcgcgaaag ctgcggagcc cactggtttc agggggtcga 3301 tgttaaaccg ttttacgtac gagaggcggt cgactcactt gatcgcttgt tcctgctaca 3361 taacaacgta tgcaggtggt ttcagcaaaa ccccgatatc tgcaaccccg atgaagttga 3421 tagattactt cattggatcc gcagtcacgc cccaaaggag tggcgcaagc cctccctact 3481 gtctttacag cagggcgacg ggggtttctt tggtaccttc acgcaagtga ggccacggaa 3541 gcctggagtc aaaaagttcg gatgggatgg ttgggtaacc gacgttctcc tatttcgttc 3601 caagtacgat aaaccagcac cctcacgggt ggacctaaca gaagatgacg aacggaactc 3661 gtggccactg ctttctaagc cagactgggc ctccttatgg aggctcgaat gggctcaagc 3721 acgatggtat cacgggcgaa tccccgcatc tatgtggtct cgctgggagc cgtctttcct 3781 aagcgccctc gggcgtctac agaaagcggc cgcggatgtg ccataccagg aacgttattg 3841 gtatgaaggc acacttgtta caccctcgca tgcagtcgaa agcgtctggt gggcttaatc 3901 gccccgcttg gctatcggct gcacggtcgg acaaccgttt aaaacctg //