LOCUS BK013585 4211 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage SRR6960799_18 genomic sequence, sequence. ACCESSION BK013585 VERSION BK013585.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage SRR6960799_18 ORGANISM ssRNA phage SRR6960799_18 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Hihdivirus; Hihdivirus caenicola. REFERENCE 1 (bases 1 to 4211) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4211) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry SRR6960799 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4211 /organism="ssRNA phage SRR6960799_18" /mol_type="genomic RNA" /isolation_source="activated sludge" /db_xref="taxon:2786574" /country="Japan" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Hihdivirus; Hihdivirus SRR6960799_18" gene 285..1706 /gene="SRR6960799_18_1" CDS 285..1706 /gene="SRR6960799_18_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50646.1" /translation="MTTGSRVTDYRYDSPFTGVKSLGMYNSRVWTGTDWSPATKVARR LARATRPDPWRIFVTKNWSFLYESTDERQIIARHHELHERWSQQWRKWLDVQKAYHAK KAEDTKRRNEEPHPYNMSLNRFNNTPAGYQVWHNPSKTFLPLVPNRPAAMASIIGYPV PPEIWNTNDDNALIEKFRSKLTSVDGFHGGVAAAELEKTLKMIADTAKTLRRFGQRAS AGDWPGALRVLYNGSSSAHVNGLAGLSKGASNYLAYQFGLKPLYEDMKGLGEYLAYCE ENPKFQRVRVTRLRYQLFDHIGNSGGKCPSRIDETGRIVAYLKRMPSRLDLSGLTDLP SMLWERGYLSFVVDWWIPIGNTLQAMQMARNLEGVFVTTRRTLIRNGPFQSGPTIRVW DDSSTRVTLTLKRTVSSSLVVKLPSLKPIFHPLTEVRIRHANEAAALMLIKRKSIISA AEKLHEKASAFVKPHWGTPSRFG" gene 1742..2203 /gene="SRR6960799_18_2" CDS 1742..2203 /gene="SRR6960799_18_2" /codon_start=1 /product="coat protein" /protein_id="DAD50647.1" /translation="MSNIANIVVYDGAATPVAHTLVPVEVVKDPKSGAITALWREQVA SLPTYAQMTAVARLNRTKVSGVWNTDFRVEVPVMESVSGQNAAGYTAAPKVAYRDTSG LYGHYHERGTIAGRRLSRQVVLNIGNNVSTSVAPATAGVLPELFDTLVAPT" gene 2241..4175 /gene="SRR6960799_18_3" CDS 2241..4175 /gene="SRR6960799_18_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50648.1" /translation="MTRKNEGQWLVQESDDETIRFAETLARIFLERAGDEGKTFRDLL DRRDWIGLLEYTPRRDGITAEIYYALAQAQACFSKLEILPTGIDRRKVALTKFLEGEY RCGVFNRVFEKRSEGELFFSPSVEAVLHCSARKIDAILGPLPPLWETPLRFSPGGATT KTKKKDSDLRNLIADVAQCSEELLADLPRFAELLETLPHLDRFIPRGEDGSMCISVKA GVLNFVRKNAKTERGVTNECPLNKLVQNGYGDIMRDRLKRWGCDLQDDGRQKELAQIG STIEGIATLDLTNASGLICLNLVRDQVPSDWLDMMLWCRTADIFISDLGRVKTLESFA GMGNGITFPLESLLFQAIAEAVCESIGLRFPIHSVYGDDIIISSEAVPLFKEVLDAIG LQINEGKSFVDGPFRESCGADWFDGYDVRPVFIRDNLSIESLYSLHNQFVRKGELDVA GIILNRIPLTHDKLWGPDLYGDGHLVCEDWHESARFVTKDGYYGWEFDTYQHIPKFNF TIEISDRVVPLVMCDAAYRSYLFSSVDEQLMRGLGRDKLGDFDAVLRSVLPLPYSNGT LKREGKRVVRPLLAAFAKSFEPPLLGTKKQTAKDRRRRNWKLRYSKKLKHKPHEDITV FGTPLPGSCGVRATTLYIFG" ORIGIN 1 gctggctcct tcatactgtc aagtatctgg tttagaagct tctgtttcag ccttttgacg 61 ggctgatcag tcggccgtta cctattcggt acggttacat agtatgcaaa gctataaaag 121 gttcatgacc tctttgcagt gcaaactacc gcccgaaagg gtgtcttggg cgctatgtac 181 ttcttccaga tatgtatgaa cagtgaagga cagctgatcc ctcggttgaa ccgagtggag 241 ctctggcgta agccttgggg ttaacctcct agaaaaggaa tgctatgaca acaggatcca 301 gagtaacgga ttatcgttac gactccccct ttaccggggt aaagtccttg ggtatgtaca 361 actcccgagt ttggaccggt acggactggt cgcctgcaac gaaagttgct cgcaggctag 421 cacgtgctac tcgtcctgat ccatggcgta tctttgtgac taaaaattgg tcctttctat 481 atgaatcgac agatgaacgg cagataatcg cccgacatca cgagttacat gaaaggtggt 541 cacagcagtg gcgtaagtgg ctcgatgttc aaaaagccta ccacgccaaa aaggccgaag 601 atacaaaaag gcggaacgag gaacctcatc cttacaacat gagtctgaat cgttttaaca 661 acacgcctgc cggctatcag gtttggcaca atccctcgaa aactttccta ccgctggtgc 721 cgaataggcc cgctgcgatg gctagtatca taggataccc tgtgcctccc gagatctgga 781 ataccaatga cgacaatgcg ttgatcgaaa agttccggtc aaagttgacg tcagtcgatg 841 gtttccatgg tggtgttgcg gcagctgagc tcgaaaagac gctcaagatg attgctgaca 901 ctgctaaaac gcttcggcgt tttggtcaaa gggcctcagc cggagactgg cctggtgcgc 961 tccgtgtttt gtacaacgga tcgtcctccg cccatgtgaa tgggcttgct ggtctatcta 1021 agggtgctag taattatcta gcttaccaat ttggcctaaa acctttgtat gaagatatga 1081 aggggctagg tgaatacctc gcttactgtg aggagaaccc aaaatttcaa cgggttcggg 1141 tgactagatt gaggtaccag cttttcgatc atatcgggaa ttctgggggc aagtgcccct 1201 cccgtattga tgaaactggt cggatcgtgg catacttgaa acgtatgccg tcgaggcttg 1261 atttatctgg ccttaccgat ctaccctcga tgctttggga aagaggctac ctgtcctttg 1321 tcgtggactg gtggatacca atcggaaata ctctccaggc catgcaaatg gcacgtaatc 1381 tggaaggcgt ctttgttaca acgagacgta ccttaatccg aaatggccct tttcagagtg 1441 gcccgacaat tcgtgtctgg gacgactcat caacgcgtgt tacacttacg ttgaagagaa 1501 ccgtttcctc gtcgctcgtt gtcaagctac catcgctaaa gcctatcttc catcctttaa 1561 cggaagtcag aataaggcac gcgaacgaag cagctgcact aatgttgatt aagcggaaaa 1621 gtattatctc tgccgcagag aagctccacg agaaggctag tgcgttcgtg aaaccccact 1681 ggggaacacc gagccgcttt ggctgatgtg gttttatatc ctttcaaatt gaggtaacgc 1741 aatgtcaaat attgcaaaca tcgtcgtata cgacggggcg gcgacgcccg ttgcacacac 1801 tctggtcccg gttgaggttg taaaagaccc gaaatcgggt gctatcacag cactttggcg 1861 tgagcaagtt gcatcgctcc cgacctatgc ccagatgacc gcggtcgctc ggttgaaccg 1921 aacgaaggta agcggcgtgt ggaacacgga ttttcgcgtg gaagttcccg tgatggaatc 1981 tgtatctggt cagaacgcag cgggttacac tgctgccccg aaagtagcat atcgtgatac 2041 gtccggttta tatggacact atcacgaacg gggcacaatc gctggacgtc gtttgtcgcg 2101 acaggtcgtg cttaacattg gcaacaatgt cagcacctca gtcgcgccgg caactgcagg 2161 cgtcttgcct gagttgttcg acaccctcgt tgcacctacc taaacttttg ttagccgctc 2221 tcttttgaaa ggagtttatt atgacccgaa aaaatgaagg tcaatggcta gttcaggaaa 2281 gtgatgatga gacgatcaga ttcgcagaaa cgcttgctcg gatttttctt gagcgagccg 2341 gggacgaagg taagacgttt cgtgacctgc ttgatcgcag ggattggatc ggtttacttg 2401 agtatacccc cagacgtgat ggaatcactg ctgaaatcta ttatgcccta gctcaagctc 2461 aagcttgttt ttcaaagctt gagatcttgc cgactggcat tgatagacgt aaagtagccc 2521 tcacgaagtt tctggagggt gagtatcggt gcggtgtatt taacagggtc ttcgaaaaac 2581 gttctgaagg tgagcttttc ttctctcctt ccgtcgaggc agtacttcac tgctccgcgc 2641 gtaaaataga cgctatccta ggccccctgc ctcctttatg ggagacgccg cttcgatttt 2701 cacccggtgg agctaccact aagacaaaaa agaaggacag cgatctgcgt aacttaatag 2761 cagacgttgc ccaatgtagc gaagagctgc tcgcggactt gccaaggttc gctgagttgc 2821 tggagacatt acctcatctc gatagattta taccgagggg tgaggatggt tccatgtgta 2881 tttcggtgaa agctggagta ctaaacttcg tccgaaagaa cgcgaagact gaacgcggtg 2941 tcaccaacga gtgtccactc aataagcttg tacagaatgg atacggtgac attatgcgcg 3001 atcgtctaaa gcgttggggt tgtgacttac aagatgacgg gcgtcagaaa gagcttgctc 3061 agattggaag cactatagag gggattgcaa ccctcgacct caccaatgcc tctggcctga 3121 tatgcctgaa tctcgtgaga gaccaggttc catcagactg gctggatatg atgctttggt 3181 gtcgcactgc cgatatattc atttcggatc tcgggcgcgt taaaacgctc gaaagctttg 3241 ctggcatggg gaatggtatt acgtttcccc ttgagagcct tttgtttcag gctatagcag 3301 aagctgtgtg cgaaagcatc ggtctacggt tcccaataca ctcggtttac ggagatgata 3361 ttatcatatc ttcggaagcc gtgcccctgt tcaaggaagt tcttgacgcg attggactgc 3421 aaattaatga aggtaaatcc tttgttgatg gtcctttcag ggagtcgtgt ggagccgatt 3481 ggttcgacgg atacgacgtt aggcctgtgt ttatccgaga taatctttcc attgagagtc 3541 tttactctct acacaatcag ttcgtccgga agggcgagtt ggatgttgcg gggattatct 3601 tgaaccgtat accactaacc catgataaac tatggggtcc cgatctctac ggagacgggc 3661 atctagtgtg cgaggactgg catgaaagtg ccaggttcgt cactaaagat gggtactacg 3721 gttgggagtt cgatacgtat cagcacatcc caaagttcaa cttcacgatc gaaatatctg 3781 atcgggtcgt acctctggta atgtgtgatg cagcttacag atcttatcta ttctcatctg 3841 ttgatgagca actcatgcga ggcctcggcc gagacaagtt gggcgacttt gatgccgttc 3901 tgagatctgt tcttccttta ccttattcca acggtactct aaaacgcgag ggtaagcggg 3961 ttgtaagacc gctactcgct gcgttcgcga agagctttga gcccccgtta ctggggacga 4021 agaagcaaac cgcgaaggac cgtaggcgta ggaactggaa gcttcgttac tccaagaagt 4081 taaaacacaa gccgcacgaa gacatcacag tgtttggtac gcccctgccg gggtcctgtg 4141 gtgtacgtgc aacaacgttg tacatttttg gatgattaac taattcatcc atggttcggg 4201 cgcattttcc c //