LOCUS BK014070 3382 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage SRR6960799_19 genomic sequence, sequence. ACCESSION BK014070 VERSION BK014070.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage SRR6960799_19 ORGANISM ssRNA phage SRR6960799_19 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Nadsecevirus; Nadsecevirus borborocola. REFERENCE 1 (bases 1 to 3382) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3382) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry SRR6960799 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3382 /organism="ssRNA phage SRR6960799_19" /mol_type="genomic RNA" /isolation_source="activated sludge" /db_xref="taxon:2786575" /country="Japan" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Nadsecevirus; Nadsecevirus SRR6960799_19" gene 152..1429 /gene="SRR6960799_19_1" CDS 152..1429 /gene="SRR6960799_19_1" /codon_start=1 /transl_except=(pos:152..154,aa:Met) /product="maturation protein" /protein_id="DAD52321.1" /translation="MPSQTRITRHRTTVNYRTYNAVGNPSGVDEFYQERSRIWNNSAL KTKVARARYILQNGFLPTQPYQDDLQQVVNSKRICATGRLKGTSNPLATYEWWLVPNV ARVPVSIDDSYLVLLENQAFEKLNSKLSGSGANLPVTLAEARSTIDMIYGAAQRILVA YNHVKRLQFRSAARALGLPRTPHGVSRTQSVQQNWLAYRYGWRLVVMDIESFCKTIYD LLRTKPIVLRMEARKQAHLEWRDVFPGVQFSAPGSGLIIFSVTNHVELHRDYDVRVGY MYQLENVSLAGAQSMGLLNPFVLAFELTPASFMLNWCSNLGSWLEGLTAFQGKKFLDG WACRAMQSSVRHRYANCVPVDVATINSGEINSFHSPWVIERRFQRRIIPGFTHPGIRL EFDMNVQRTLDLLAIVKQVFLDPKRPMTLPRIS" gene 1466..1843 /gene="SRR6960799_19_2" CDS 1466..1843 /gene="SRR6960799_19_2" /codon_start=1 /product="coat protein" /protein_id="DAD52322.1" /translation="MATIANITLKDSANAAKTYVPEAVQTGAKASWVNRDQGTSVGVK RANVAIPKKQGKYDRVNGRITHPVVNATTGELDFANYFSFEAQTHERSTLAQKQELMN SAAAMLGLAPIFTLCTTGESISG" gene 1858..>3382 /gene="SRR6960799_19_3" CDS 1858..>3382 /gene="SRR6960799_19_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD52323.1" /translation="MGSTETSVNLDNASKRRVKRETEALIQMGSAFQLTEADYLEVAK VMWASLDTPISLSCALLLKYQEYEQLVTRTVRPQDYCDVPLVSSWCSPLQFRDDYLAV SVLAKWPNFEHADLDPVGACEGADLAAEIHCRKTNERLARVRFSPRGDEAAYLHLMFR MQADISRVLGAFHPTEWLEACRFGPGKASAQTGTIDYEKLLSQPSVTADFAALGAALL AESTPWLEAVSGVAPDVFSHECGEEEMVYRFDMTLEPGDRNRMVPKNAKTMRGIRPQP GLNVFAQLGIGEMIRHRLRLNGLDLDNQTPNQHLAQKGSLRGSTLVTVDLKGASGHIA RRLPPFLLETANPGWLHAMQLTRTTRMLPHGASDEAAKSDAAWVPMESFSAMGNGYTF ELETLIFWAAVRACRQKVQDDAPYRVYGDDIICGCKTADLLLPFLDFLGFPLNLKKTF LEGPFRESCGADWWDGTNVRPIFFSVTAEEIHEDNENGTSILRWLQTCNAIRRLARAR " ORIGIN 1 cctggagagg tcggaccacc cgggaacatt cgggacctag agcattcgct cgtggtctgt 61 gtccaaatgc accagcctaa ctcagctgga ttttataccg gtagctccat aaaccatgga 121 gtgacggtag cactattcgc gaggtagtac cgtgccttca cagacccgca tcacacgaca 181 tcggacaacc gttaattacc gcacttacaa cgcggtcgga aatccttctg gagtggatga 241 gttctatcag gaacggtcgc ggatttggaa taatagcgcg ctcaagacga aagtcgcccg 301 ggctcgttat atcctccaaa acggcttctt gccgacgcaa ccataccaag atgatcttca 361 gcaggtcgtc aacagtaagc gaatatgtgc gacggggcgg cttaagggaa cgtcaaaccc 421 cttagctacg tacgagtggt ggctggtacc taatgttgca cgggtgccag tatcaatcga 481 cgattcgtac cttgtactac ttgagaacca ggcgttcgag aaattgaact ccaaactctc 541 cggtagcggt gcgaaccttc ccgttacact cgctgaggcc cgttcgacca tagatatgat 601 ctacggagca gcccagcgaa ttctcgtagc ctacaaccac gtaaagcgct tgcagtttcg 661 aagcgcagca cgggctttag gtctccctcg gacccctcac ggggttagcc gcacgcagtc 721 agtccagcaa aactggcttg cgtatcgcta cggctggagg ctcgtcgtaa tggacatcga 781 gtccttttgc aagacgatct acgatttgct acgtaccaag cctatcgtcc ttcggatgga 841 agcccggaaa caggcccatc tggagtggcg agatgtcttc cctggtgtac agttttccgc 901 accgggaagt ggcttaatca tcttctctgt cacgaaccac gtagaattac accgtgatta 961 tgatgtcaga gttgggtaca tgtaccagct tgaaaatgtt tctctcgctg gtgcccagtc 1021 gatgggtttg ctgaacccat tcgtgttggc gtttgagtta acgccggcca gctttatgct 1081 gaactggtgt agcaaccttg gctcttggct cgagggtctc acggcgttcc agggtaagaa 1141 gttcctggac gggtgggcct gtagagctat gcagtcaagt gtgcgtcatc ggtacgcaaa 1201 ttgcgtccct gtcgacgttg ctacaatcaa ctcaggggaa attaactcgt ttcactctcc 1261 ttgggttatc gagcgccgtt ttcaacgacg gattatacca ggatttactc accctggcat 1321 acgtctcgaa tttgacatga acgttcagcg cactttggat ctgcttgcta ttgtcaagca 1381 agtgttctta gatccgaaaa ggccgatgac gcttccgcgc atcagctgaa ctcttccatc 1441 cctttttctt tctgaggcat ccaccatggc tactattgcc aatatcactc tcaaagactc 1501 cgctaacgcc gctaagacgt atgtaccgga agcggtccaa acaggggcaa aggcctcctg 1561 ggtgaaccgt gaccaaggta cgtccgttgg cgtcaaacgg gctaacgtcg ctatcccaaa 1621 gaagcaaggg aagtacgatc gcgtgaatgg tcgcatcacc catcctgtgg tgaatgcaac 1681 gaccggcgaa cttgatttcg ccaactactt cagcttcgag gcccaaaccc atgaacgatc 1741 cacgctagca caaaagcagg agctgatgaa ctcggctgct gcaatgcttg gcttggctcc 1801 gatcttcacc ctgtgtacca ccggcgagtc aatctccggc taacatagga tgacgacatg 1861 ggctcaactg aaacttcagt gaacctggat aatgcgtcca aaagacgtgt taagcgcgaa 1921 acagaagcgc taatccagat gggttccgct ttccaactta cggaagcgga ctacctcgag 1981 gttgccaaag ttatgtgggc aagtcttgat actccgatct ctttgagctg tgctctcctc 2041 ctaaagtatc aggagtatga gcaactagtg acacgaacag tacgtccaca agactactgt 2101 gacgtgccgc ttgtttcgtc gtggtgttcg cccctgcaat ttagggatga ctacctggcg 2161 gtcagcgttt tggccaaatg gccgaacttt gagcatgcgg atcttgaccc ggtcggtgcc 2221 tgcgaaggcg ccgatcttgc ggcagaaata cattgtcgca agacaaatga gcgtctcgct 2281 agagtccggt ttagtccccg aggggacgag gcggcatact tgcatctaat gtttaggatg 2341 caggccgata ttagccgtgt tctaggagcg tttcacccca ccgagtggtt ggaggcatgt 2401 aggttcggtc caggtaaggc ttcggcccaa actggtacga ttgactatga gaaactactt 2461 agtcaaccga gcgttactgc tgacttcgct gctctagggg cggctctcct tgcagagagt 2521 accccctggc tcgaggctgt gtcaggcgtt gcacccgacg tcttctccca cgaatgtggg 2581 gaggaagaga tggtgtatcg cttcgatatg acattagagc ctggcgaccg taaccgtatg 2641 gtccccaaga atgcgaaaac catgcgaggg attcgtcccc aacctggttt aaacgtattc 2701 gcacaactgg gtattggcga gatgattcgt catcgtcttc gcctgaacgg tttagatttg 2761 gataaccaaa ctccgaatca acacctagct cagaaaggaa gcctccgtgg atccacatta 2821 gtaactgtgg accttaaggg agcctccggg cacatagccc gtaggttacc gccgtttctt 2881 ctcgaaacag cgaaccccgg ttggctacat gccatgcagc tgacacggac aactcgcatg 2941 ctgccccacg gggctagtga cgaggctgcc aaaagtgatg ctgcgtgggt tcctatggaa 3001 tcctttagtg caatgggcaa tggctacaca tttgaattgg agaccctgat cttttgggcc 3061 gccgttcgag catgtagaca gaaggtccaa gacgacgcac cttaccgtgt gtacggtgat 3121 gacatcatct gtggttgtaa gactgcagac ctgttgttgc ccttcttgga cttcctaggg 3181 ttcccactta acctcaagaa aacttttctt gagggaccgt tccgcgaaag ttgcggtgcg 3241 gattggtggg acgggaccaa cgtaagaccg atcttcttca gcgtgactgc tgaggaaatt 3301 catgaggata atgaaaatgg aacatccatt ttgcgatggt tgcaaacgtg taacgcgatc 3361 cgccgcctcg cgcgggcccg ta //