LOCUS BK014068 3567 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage SRR6960799_25 genomic sequence, sequence. ACCESSION BK014068 VERSION BK014068.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage SRR6960799_25 ORGANISM ssRNA phage SRR6960799_25 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Shuravirus; Shuravirus limicola. REFERENCE 1 (bases 1 to 3567) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3567) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry SRR6960799 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3567 /organism="ssRNA phage SRR6960799_25" /mol_type="genomic RNA" /isolation_source="activated sludge" /db_xref="taxon:2786582" /country="Japan" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Shuravirus; Shuravirus SRR6960799_25" gene 135..1217 /gene="SRR6960799_25_1" CDS 135..1217 /gene="SRR6960799_25_1" /codon_start=1 /product="maturation protein" /protein_id="DAD52315.1" /translation="MSSPRITYEESHFPSSQMRNYVRSQNGVYGDKKSVYPYTFYRAR SFGAQKHTNGAISAIDAPNTRSLYDLKSSSGIPPWARPSYNKCYARLRESVNGEAEAL LGATIATWGESSSMIRNRLLSLVGAAKALRSGNFKAFLRALRAPAKSKHKNKIRALPD EFSSLWLEYWFGWSPLIADIYSAVNVIQSPLPNGTARARAKAENAWKEKPYPYQEMTY WVKVRHQILVDVTLENPNLWLANQLGLANPALVAWDLIPFSFVADWFFDVSGFLGSFT DFLGLKIDNPCVTHTGEWYDTDFIKAPLWSGGPQTCVGNYMRRHSTLLRPLPNTQFRT NLGSSITRAASAASLLTKLLVGNPKG" gene 1239..1631 /gene="SRR6960799_25_2" CDS 1239..1631 /gene="SRR6960799_25_2" /codon_start=1 /product="coat protein" /protein_id="DAD52316.1" /translation="MPSMANITVKDSANADVIYVVATPSAGDRSPAIWRANALSPIIG FRPSFSVMTRDNQKQSGRIMEASFKFPILGNVSGQTVLLATVPYTFAGTIPTNIDSAL ALNAFTQFGNLCASALVRSIVSDGYAPT" gene 1754..3517 /gene="SRR6960799_25_3" CDS 1754..3517 /gene="SRR6960799_25_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD52317.1" /translation="MSDIARPIKRAATLLFQSLNTPMTLSCEILLRYGEWDQLATRWI DPGNFLDCPSGVRLYRHAAQAADFLRKMGGLPSTFDTKAAAYDNFWKCQKKCKETNLL FEYLLDGGTYGPYSERLVSILERARKTTRRIMGPVPDHLTGGFGPGTCFGLEGSTFKT LADKLWLTPTVTQQAQAVFKHTVEGTLWDRKRVEMGLPYLSIVEGNKFTTVAKDAKTD RGICIEPLGNLYCQLGVGKYLKERLAMMGLYVHREVHNEDPLRHMLARPRPNGQRLHN RLAEMASRDGSWATIDLSSASDTIAKKLVEYLLPPQWFSLLSSLRSPKTLIYSDLTKR NVWVLNEMFSTMGNGFTFELETIIFAALSSAVAGLEIGVELFVYGDDIIVPTHASKDV IAILRSCGFIPNEKKTFTRGLFRESCGGDYFCGIWVRSCFVKKEPESPLEWISLHNEI RIRFPHMRVLLKHIVDQIPERLRCYGPQSAVDSYLHTSVASKVKRYVPRKHIEDYSLM CLRYARIRKSIPQSEDDGIYWIRTIAGMPHRIPLERWGHEFTVSLALLGVSSEGVEPR GSVTGWRIVPWSITHLLHRLH" ORIGIN 1 cccccccctt aactgactag cttcacgtgg taacaccaca tgaagttgta tcacgttcac 61 atcacgtgaa cgcttaagac aacatcttaa gttcccggcc ttgtggcatg gaacccacca 121 gtctgggagt gtatatgtct agtccccgaa taacctacga agaatcgcac ttcccttctt 181 ctcagatgag gaactatgta cgctcccaaa atggcgtata tggagataaa aagtctgtat 241 atccatatac tttttatcgt gcgaggagtt ttggtgcgca aaaacacacc aatggtgcta 301 tatcggccat tgatgcccca aatactcgtt ccttatacga tttaaaatcg tcttcaggaa 361 tccctccgtg ggcccgaccg agctacaaca aatgttacgc tcggcttagg gaaagtgtca 421 atggcgaagc tgaagcctta ctaggtgcaa ctattgccac ctggggcgaa tcatcttcta 481 tgattcgcaa taggctcctt agcttggtag gtgctgccaa agctttacgc agcggcaact 541 ttaaggcatt tcttcgtgcc ttgagggcgc ctgccaagtc taagcacaag aacaaaattc 601 gggccttgcc cgatgagttc agcagcttat ggctggaata ctggtttggt tggtctccct 661 taattgcgga tatatattcc gcggttaatg tcatccaaag tcccttacca aatgggactg 721 ccagggctcg tgcgaaagca gagaatgcct ggaaagaaaa gccttatcct tatcaggaaa 781 tgacttattg ggtgaaagtc cgtcatcaaa tccttgttga cgtaactctg gagaatccca 841 acctttggct ggcaaaccag ctcggattgg ccaacccggc attggtggct tgggatctta 901 tccctttctc attcgttgcc gactggtttt tcgatgtatc aggtttcctc gggtccttca 961 cggacttctt gggactgaag atcgacaatc cgtgtgtcac acacactggt gagtggtatg 1021 acacagactt cataaaggct ccgctttggt cgggtggccc acaaacgtgt gtaggtaact 1081 atatgcgtcg ccattcaacg ttgctacggc ctttaccaaa tacccaattt cgtactaact 1141 tgggtagttc catcacccgt gctgcatccg cagcttcact cctaaccaaa ctgctggtcg 1201 gcaacccaaa agggtaagac cagttaaggg aagtcatcat gccatccatg gcaaacataa 1261 cggtcaaaga cagcgctaac gccgacgtga tttatgtcgt cgctacgcca tctgctgggg 1321 atcgctcccc ggctatttgg cgtgcaaacg ctctgagtcc catcatcggc ttccggccat 1381 ctttttcagt gatgacgcgg gacaaccaga aacagagcgg tcgtatcatg gaagcgagct 1441 tcaaattccc gatccttggg aatgtgagcg gtcaaaccgt tttgctcgct accgtgccat 1501 acactttcgc cggaactatt ccgaccaaca ttgactcagc tttggccctt aatgcgttta 1561 cgcaatttgg gaacctttgc gcgtctgcgc tggttcggtc tattgtctct gatggttacg 1621 cgcccactta aacgtagggt gcttggcctc attgacttaa ccggcagtgc tttttggact 1681 atagcaggta tttacctgat aatcatagtc ctccttatgg cagttcttgt tctacctaca 1741 ataggtaacc aagatgagcg acattgcccg cccgataaaa agggctgcga cattgctatt 1801 ccagagcctc aacactccca tgacactgag ttgcgaaata ctccttcgtt atggcgagtg 1861 ggatcaacta gcgacacgct ggattgatcc aggcaacttt ctagattgtc ccagcggcgt 1921 tcggttatac cgacatgcgg cgcaagccgc tgatttcctc cgtaaaatgg gggggttacc 1981 gagcaccttc gatacgaagg cggccgctta cgacaacttc tggaaatgcc agaagaagtg 2041 caaagaaaca aatctcctct ttgaatacct gttggacgga gggacctatg gtccctactc 2101 cgaacgtctc gtttcaatcc tggaacgtgc acggaaaacc accaggcgga taatgggacc 2161 ggtgccagat caccttactg gtggttttgg cccgggcact tgcttcggac ttgaaggttc 2221 gacgttcaag acgttagcgg ataagctatg gctaacacca actgtgactc aacaagcgca 2281 agctgtgttt aaacacaccg ttgaaggaac cttatgggac cggaaacgtg ttgagatggg 2341 tcttccttat ctgtccatag tcgaaggcaa caaattcaca accgttgcca aagacgcaaa 2401 gacagaccgc ggtatctgta ttgaaccgct ggggaacctc tactgtcagc tcggagtggg 2461 gaagtacctt aaggagcgtt tagcaatgat ggggctttac gtgcatcgtg aggtgcacaa 2521 cgaagatcct cttcgccaca tgctagcgcg gccccgccct aacgggcaga gactgcataa 2581 tcggttggcc gagatggcta gccgagatgg cagctgggct actatagacc taagtagtgc 2641 ttcagacact atagcgaaga aacttgtgga gtacttatta cctccgcagt ggttttcgct 2701 attatcatcg ctacgctctc ctaaaacact catatactcc gatttaacta agaggaatgt 2761 atgggttttg aacgagatgt tctccaccat ggggaacggt tttacattcg aactcgaaac 2821 catcatattt gcggcattat cttccgctgt tgctggtcta gagatcggtg tggaactatt 2881 cgtgtacggc gacgatataa tcgtcccgac tcacgctagc aaagacgtca tagccatcct 2941 tcgctcatgt gggtttatcc caaatgaaaa gaagactttc acccgcggat tattccgcga 3001 gtcttgcggt ggtgactatt tctgcggcat ttgggttcgt agctgtttcg ttaagaaaga 3061 gcccgaatcg ccgttagagt ggatatctct tcacaatgag atccgtataa ggtttcctca 3121 tatgcgggtg cttttaaagc acattgtgga ccagattcct gagcgtcttc gatgctacgg 3181 ccctcaaagc gccgtagact cctacttgca caccagcgtt gccagtaagg ttaagcggta 3241 cgtgccccga aagcatattg aggattactc cttgatgtgc cttaggtacg cgcgcatccg 3301 taaatccatt cctcaatctg aggatgatgg tatctactgg ataaggacaa tagctggtat 3361 gccccaccgt attccattgg aacgatgggg gcacgagttt actgtttcac tcgcgctact 3421 aggagtatcc tccgagggtg ttgagccacg cggctctgtc acaggctgga ggattgtgcc 3481 ctggagtatt acacaccttc ttcataggct tcactaggga tttccctata ctgatgggtc 3541 ttcttagcaa ttgaccctga agccgta //