LOCUS BK013608 4267 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage SRR6960803_6 genomic sequence, sequence. ACCESSION BK013608 VERSION BK013608.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage SRR6960803_6 ORGANISM ssRNA phage SRR6960803_6 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Pipunevirus; Pipunevirus borborovivens. REFERENCE 1 (bases 1 to 4267) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4267) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry SRR6960803 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4267 /organism="ssRNA phage SRR6960803_6" /mol_type="genomic RNA" /isolation_source="activated sludge" /db_xref="taxon:2786622" /country="Japan" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Pipunevirus; Pipunevirus SRR6960803_6" gene 34..393 /gene="SRR6960803_6_1" CDS 34..393 /gene="SRR6960803_6_1" /codon_start=1 /product="hypothetical protein" /protein_id="DAD50718.1" /translation="MSIESQVRIYSVRLLSVTQASFLSSVIDEGDDGRLGNQFLYEPM TYDFIEIVSSGWTGGAKLRVKRISKEKALAYANKLLSGAWIDEIEYHKLYVAIDHLLN GMCDLRSAWEARYSPMS" gene 509..1828 /gene="SRR6960803_6_2" CDS 509..1828 /gene="SRR6960803_6_2" /codon_start=1 /product="maturation protein" /protein_id="DAD50719.1" /translation="MTTGTYTVNPGQIWERDTNDWGTFRWYPYGLKFNRSWSGNDSSK NYTVVQMTVPREDTIVKKRDRRGGEYYAVKRSPPRVVKKRVYAKGFRQPNDFSSDNRR WVYGDLHVYSGTKTNQSVWQLNQLGYVPSFAGTEIFDSNKQLALINKLSEKIQDTDFS AAISLAEVDKTCKMIADRAKTIAKSVAYLRKGNLREALRIISGHDRSKSGQPKRRLDQ TVGARILEVQYGWKPLVQDMYEGAIWLAALQNKPNCHRYSVRSRAIRAANNSGAGIWH RNPHTEVRRQIIAYLEESSFSPTLNLWNPAEILWERTPWSFVCDWVVPIGSYLAARGI ASELKGTFVTTTHLRKRCVGGLMLSPQGSVEYTKARKYENVGAYDPYWSEEFVTRTVS NSLSVPLPTFKGMGQIASWQHCLNAVSLLAVASSASPDKVLRSAGRL" gene 1904..2356 /gene="SRR6960803_6_3" CDS 1904..2356 /gene="SRR6960803_6_3" /codon_start=1 /product="coat protein" /protein_id="DAD50720.1" /translation="MSAMANIVVYDGATTPVAHTCVPVLQKLDGGTVFALWREQVPSL PNEAQVRVEMRQRTLRSGVLETRTRVVVPVMESISGQNAAGYTAAPKVAYEDANEWVN YSHPRSTITGRRVAKQLLTNLSNNVATTVAAATTGVFDEANVQSVMPT" gene 2402..4180 /gene="SRR6960803_6_4" CDS 2402..4180 /gene="SRR6960803_6_4" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50721.1" /translation="MSLFKTWDGLISTEATNEFLTELALAHLGELSSSSYQVGDRIAH FLSERDYRSLCEFKLRPDATTLPDNLYHINQVLAFFKKRSDLDVGADRRGTAWAKFYE SEMLCTRTNNIFKAWQSGNFQFPRNVEAVLHSAQRKISRVLGSCPSLDDLHVYFGPGA TTRVGKRMACAKVKLSQPPVCSEELVPLVGNLLESIPGYTFSSRDDTWDLESTPVDVF IDPGRISFVLKNCFEDRTAVIEPWLNSIGQLGIGSEMAKRLRSRAGIDLRDQSTNRRL AREGSITGDLATLDLSSASDTISTKLVEHLLPPEWFDLLSRFRTGTVKTPFGGEMRLQ KFSSMGNGFTFPLESLIFWALTSSVAAGRETVSVYGDDIICPTEIVEEVMQVLNCVGF VVNKEKSFWDGPFRESCGGDYLSGIDVRPCYIKGPLRGQDAFRLHNYYVRAGHSDFAS SVRKHIAEDIALTGPDGFGDGHLIGEWTPCRKKEHTARGWGGVLFDTWCYAKREFNKR LPGDDILPVYSIYTREGTSADPVKRLADEEQLFMRWLINHTYEEDMPGFYEAQAYRFT RHGVPVNYIPGTKGCKRISIYTLASQ" ORIGIN 1 ctcctttcca tactcactta atcggagaaa atcatgtcaa tcgaaagcca agttcgcatt 61 tattctgtcc gtctacttag cgtcacgcaa gctagttttc ttagctcggt gatcgacgaa 121 ggtgacgatg gtcgtttagg gaatcaattc ctttacgaac ctatgacgta cgattttatt 181 gagatcgtgt cgtctggttg gacagggggt gctaagttgc gagttaaacg catctcaaaa 241 gagaaagcgc ttgcttacgc aaacaaactc ctgagcgggg cctggattga cgagattgag 301 taccataagc tctacgtcgc tatagatcac ctccttaacg ggatgtgtga tctaagaagc 361 gcgtgggagg ctaggtactc tccgatgtca tgagctggat tggagagcca tccgctgggg 421 tgcctaaaac aggcctccct ccgtatacct tccggtaacg ggaagtaaaa ggtaaagcgt 481 ttcatcgcgc gagcgaggag ttactgcaat gaccactggc acatacaccg tcaacccagg 541 tcaaatatgg gaacgggata caaacgattg gggaaccttt cgttggtatc cttatggttt 601 gaaattcaac cgatcctggt ctgggaatga ctcttccaaa aactacaccg ttgtgcaaat 661 gacggtgccc cgtgaagata caatcgtgaa aaaacgcgat cgtaggggtg gtgagtatta 721 cgctgtgaag cgcagcccac caagagttgt gaagaaaagg gtgtatgcca aaggatttcg 781 ccaaccgaac gattttagtt cggacaaccg tagatgggtg tacggcgatc tccatgtgta 841 ctcgggcact aagactaatc aatccgtctg gcaattaaac cagcttggat atgtcccttc 901 ctttgcagga accgagattt ttgattcgaa caaacaactt gctttaatca acaagttgag 961 cgaaaaaatt caggacactg acttctcggc ggcgatttcg cttgccgagg tggacaagac 1021 ctgtaagatg atcgctgata gggccaagac aattgctaag tctgtggcat acctccgtaa 1081 aggaaacttg agggaggccc ttcgaatcat aagtggtcac gatcgttcca aatctgggca 1141 acctaagagg cgtctcgacc aaacagtcgg tgcgcgtatt ttggaagtcc agtatggatg 1201 gaaacccctt gtacaagaca tgtacgaggg agcgatctgg ttagcagcct tgcaaaacaa 1261 gcccaattgc caccggtact ccgtgaggag ccgggcaata agggcggcaa acaacagcgg 1321 cgctggtatc tggcatcgaa atcctcatac tgaggtcaga cgtcagatta tcgcgtatct 1381 cgaggagtct tcattcagcc ccacattaaa tctgtggaac ccggctgaaa tcctctggga 1441 acgcacgccc tggtccttcg tctgcgattg ggttgtaccc atcggttcgt acctagcagc 1501 gcgaggcatt gcctctgaac tgaaagggac gttcgtgacg accacgcact tgcgaaagcg 1561 gtgcgtaggc gggcttatgt taagcccaca gggatcagta gagtacacga aagctcgtaa 1621 gtacgagaac gtaggggctt atgaccccta ctggtcggaa gagttcgtga ctcggacagt 1681 tagcaactcg cttagtgtcc cattgcctac ctttaagggc atgggccaga tagcgtcgtg 1741 gcaacactgt ctaaatgctg ttagtcttct cgcagttgct tcatccgcaa gccctgataa 1801 ggtactcaga agtgcaggtc ggctttagcc gttgcactta ttatcaggtt aaccatccgg 1861 gtatggacac cctcaaccat gcctttaatt tgaggaatat caaatgtcag caatggctaa 1921 tattgtcgtt tacgacggcg caacaactcc tgtcgcacat acgtgtgtgc ctgttcttca 1981 gaagctcgat ggtggcactg ttttcgccct ttggcgcgaa caggtcccct cgttgcctaa 2041 tgaagctcag gtccgcgtcg aaatgcggca aaggaccttg aggtccggag ttctcgagac 2101 gcgtactcgc gtagtggttc ctgtaatgga atctattagt ggccaaaacg cagcaggtta 2161 tactgctgcg ccgaaagtag cttatgagga cgcgaacgag tgggtaaatt actcccaccc 2221 tcgctccacc atcactggtc gccgcgttgc gaaacagctt cttacgaacc tgtcgaacaa 2281 cgtagccaca accgtggcgg ctgctaccac cggcgtcttc gacgaggcca acgtccaatc 2341 ggtcatgcct acttaattgt agtctgacca cacggcaata tcctttataa ggagtaatgc 2401 aatgtcttta tttaagacgt gggacggtct catctcgacg gaggccacaa atgagttcct 2461 tacagagctc gcccttgctc accttggcga actatccagt tcgagctacc aagttggtga 2521 tcgtattgct cattttctta gtgagcgtga ttacagatca ctttgtgagt ttaaactgcg 2581 ccccgatgca accaccctac ctgataatct gtaccacatc aatcaggttt tagcgttttt 2641 caaaaaacgt agcgaccttg atgttggtgc ggacaggcgg gggaccgctt gggcgaagtt 2701 ttatgagtcc gagatgctgt gcaccaggac gaacaacata tttaaagcat ggcaatccgg 2761 gaattttcaa tttccccgga acgttgaggc tgtacttcac agtgctcagc ggaaaattag 2821 ccgtgttcta ggtagctgtc cgtctctgga cgatttgcat gtgtatttcg gacctggggc 2881 aaccacgcga gtgggcaaaa ggatggcgtg cgcgaaagtt aaactatcgc aaccgcccgt 2941 gtgtagcgaa gaactggtgc ctctagtagg aaatctacta gagagcattc caggctatac 3001 gttctcgtcg cgagacgaca cgtgggacct ggaatccacc cccgttgatg tattcatcga 3061 cccgggtcgg atcagcttcg tcctgaagaa ctgcttcgag gaccgtaccg cagtaattga 3121 accgtggtta aattccattg gtcagctggg tattggttcc gaaatggcaa aacgccttag 3181 aagcagagct gggatcgacc ttcgtgacca gtcgactaat cgtcggctag cccgcgaagg 3241 ctcgataacc ggggacttag caaccctgga cctaagtagt gcatctgaca cgatctcgac 3301 gaagttagtc gagcatttgt tgccccccga gtggttcgat cttctgtccc ggtttaggac 3361 agggaccgtt aaaacaccgt tcgggggaga gatgcgtctc cagaagttta gctcaatggg 3421 aaatggtttt acattcccgc ttgagtcgct tatcttctgg gccctcacaa gctcagttgc 3481 cgccggtcgc gagaccgtgt cggtgtatgg cgacgacatc atctgcccta cagaaatcgt 3541 agaggaagtg atgcaagtgt tgaactgcgt tggtttcgta gtcaacaaag agaaatcctt 3601 ttgggacggc ccttttcgcg aatcttgcgg aggggactac ttatcaggaa tagatgtacg 3661 cccttgttac ataaagggac cactccgagg ccaggatgct ttccgattgc acaattatta 3721 cgtgcgagca gggcattctg actttgcgtc atcagtgcga aagcacatcg ctgaagatat 3781 agctctcacc ggcccagacg ggtttggtga tggccactta atcggcgaat ggacgccgtg 3841 ccgtaaaaaa gaacatacgg cacgcgggtg gggtggtgta ctctttgata cctggtgcta 3901 tgcaaagcgc gagtttaaca agcgcttgcc aggagacgac attcttccag tgtacagcat 3961 ctatacccga gagggtacaa gtgccgatcc ggtgaagcgt ctagcggatg aagagcaact 4021 ctttatgcgg tggctgataa accacacgta tgaagaggat atgccgggct tttatgaagc 4081 ccaagcatat cgctttacgc gtcatggtgt cccagtgaat tatattccgg gcaccaaagg 4141 gtgcaaacgt atttctatct acaccctagc atcgcagtga atgcgaccta gactccggcc 4201 ttacggccgg tgacagcacg gaaagacgcg ttggagggac ggaagtccta caaatgtgtg 4261 gccgccg //