LOCUS BK013710 4061 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage SRR7976299_13 genomic sequence, sequence. ACCESSION BK013710 VERSION BK013710.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage SRR7976299_13 ORGANISM ssRNA phage SRR7976299_13 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Solspiviridae; Fahrmivirus; Fahrmivirus limadaptatum. REFERENCE 1 (bases 1 to 4061) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4061) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry SRR7976299 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4061 /organism="ssRNA phage SRR7976299_13" /mol_type="genomic RNA" /isolation_source="activated sludge" /db_xref="taxon:2786635" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Solspiviridae; Fahrmivirus; Fahrmivirus SRR7976299_13" gene 173..1543 /gene="SRR7976299_13_1" CDS 173..1543 /gene="SRR7976299_13_1" /codon_start=1 /product="maturation protein" /protein_id="DAD51070.1" /translation="MNRIRTLGVLTPPKAWTEVWSKTGLAVATGTGTRVGETQVMADR TIEKFRKKQANGEVFFNPMNKVRAVISDTTGGVTSRVVNTGSSAYNTTYTDSPGIVPY VLKSVGTTLSGTVPRVWYDDTIQPVRLATLPAARAISEACTKAGGLPSKANLLVTAAE YRQLLSLAPDLLGSWTRFFRRVNDQRSRVPVVRRSSSDVQKYQGGQAPVRFLRDQWRD VVQFWLISRFGLRPLMMETMGVLQAIEKLHDQHDRYTSRGVATAQESAAYAGVVRMGI GDWQFATSVHNEIRVRAMQLFEGQLTLAKDVGLAISSVPEAAIDLVRFSFVLNWVVNV NDFFRALGRFTDPSFKSLGSCYVVDETFSTVWQPTGVTSNNVSYAVEKQPSGLLSSTV QLRRRVVGITPPKLVVRSSPLRWTKDARLLDAVALLDVQLRGRNVRGLAGLSQLGRAS GFNNPF" gene 1555..1911 /gene="SRR7976299_13_2" CDS 1555..1911 /gene="SRR7976299_13_2" /codon_start=1 /product="coat protein" /protein_id="DAD51071.1" /translation="MTITVNAKSYTADGFFGNTVSYIGPGQSGAAKDRLVLKKTDPKA TPDFSGVNRYEAKFTRTVTLTGAKTATGEAWKRVEIVTPVGMSDADRDALIGDDAVWE ATAGFKAMVKVGQVNG" gene 2048..3961 /gene="SRR7976299_13_3" CDS 2048..3961 /gene="SRR7976299_13_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51072.1" /translation="MTTFHTGPRPFQGERPHAYSQASLSEELLGNIRQFNEAQQADSG LRVLRSLLSQIVRHPAWADAKPILHALNGPDPVKCLPLAKSLLSQTYDSADEQFIKGQ IGALVKKYPFSTSRKIAEEAGMRVFTTGERRNRHMNALLRARRDVHAQHDLHWSMLSI RRYIRRVLGDAPRWDTYPGACNWGPGSNVGVTGRFTHFARKLLADEWTVTPACYPYAL TLAKRLPMFWDELGFTRSLLSEDGVTQIVVTCVDSDEFEVRFKSRCKFVDYNKISLAK KDADKDRTIASEPLMNQMVQMAFEDDLRNRLLAEGFDLRNQRRNQDYAREGSLGGFNP RCTIDLRNASGSICRELPYDCLPRSWWIALNSCRSPSWHYKGKTTRYHGFVSMGNGFC FPLETLIFAAICNAAHEYCASRPDFVVYGDDIVVRQSEALVVLELLRRYGFAANPDKT FLFGPFRESCGTDWHGGVDVRPVYLDDDLAKLEHRIRAHNAFVRLGSPQWAPWLASHV ANNLPSFVSHFVRPWADETDEAIDGRFHMMQPAKSTHWDKTIQCPAWYGLMFIPKRDK SIEGHSRFATALYHAALKGSDSEMPFAERRETLVRVARFSHSGSRSTWEPEAVRPMVR LSSSSLFIKVFGP" ORIGIN 1 gtggtggggg gccttggact tcgttgactg ggctaaccac ccagccagtt tcgaggaacc 61 ggggtgtggc ttagctgcca cactaggatc ctggagtccg ctaacaggga gatcgaaacc 121 tcccttgtta gtactattgt ttgtgtatcg ttgtaatcat aggagcctta tcatgaaccg 181 tatccgtaca ctaggggtat taaccccgcc caaggcatgg actgaagtct ggtcgaagac 241 cggactcgcc gttgccactg gaacggggac ccgggtgggg gagacgcaag tgatggctga 301 ccgaaccatt gagaagtttc gcaagaaaca ggccaatggc gaggttttct ttaaccctat 361 gaataaagta cgcgcagtca ttagcgacac aaccgggggg gtgacctccc gcgtcgtgaa 421 cactggttcg tccgcgtaca atacaactta cactgattcg cccggaattg tcccgtacgt 481 gctgaaatct gtaggcacga ctttgtcggg aacagtacca agagtgtggt atgatgatac 541 catacaaccc gttcggctag ctacattgcc ggcggcgagg gcgatatctg aagcatgcac 601 caaagctggg ggtttgccct caaaagcaaa cctgctcgtg accgcggcgg agtaccgtca 661 gcttctatca cttgcacccg acctcctcgg atcttggacc cggttcttcc gtcgtgtaaa 721 cgatcagcga agcagggtcc ctgtggttcg tcgctcctct agcgacgttc agaaatacca 781 gggaggacag gcaccggtgc gtttcctgcg tgaccaatgg agggatgtcg tccagttctg 841 gctaatcagc cggttcgggc tccgacccct catgatggaa acaatgggag tgcttcaagc 901 aatagagaag ctacacgatc agcatgaccg ctatacgagt cgtggcgttg ccacggctca 961 agaatcagcg gcgtatgctg gcgttgtacg gatggggatt ggcgactggc agttcgcaac 1021 aagcgtgcac aatgaaatac gtgtgcgcgc gatgcagctg tttgaagggc agttaaccct 1081 ggctaaagac gtcggattag cgatttccag tgttccggaa gccgcaattg atcttgtccg 1141 atttagtttc gtcctcaact gggtcgtgaa cgtgaatgac ttctttcgcg ctcttggccg 1201 cttcaccgat ccatcgttta agtcgttggg ttcctgctac gttgtcgatg aaacattttc 1261 gacagtttgg caaccaacgg gtgttacgag caacaatgtc agttacgctg ttgaaaagca 1321 gccctctggc ctgttgtcct cgaccgtgca gcttcgccgc cgtgtcgtgg ggatcacacc 1381 accgaagtta gtcgtccgct cctcgccact taggtggaca aaggatgcac gcctccttga 1441 cgcagttgcg ttgttggatg tgcagttacg cgggcgcaac gtccggggtt tagctgggct 1501 gtcacagctt ggtagagctt ccgggtttaa taatcctttc taaagaggtt catcatgacc 1561 attacggtca acgcaaagtc gtacaccgcc gacggtttct tcggcaacac ggtctcctat 1621 atcggccccg gtcaatccgg tgccgccaag gatcgcctgg tgctgaagaa gactgatccg 1681 aaggcaaccc cggacttttc tggggtcaac cgctacgaag ccaagttcac tcgcacggtc 1741 accctcacgg gtgccaaaac tgcgactggc gaagcttgga agcgtgttga aatcgtcacc 1801 ccggtcggca tgtccgacgc ggatcgtgac gcactcatcg gcgacgatgc agtgtgggaa 1861 gccactgccg gctttaaggc aatggtgaag gtcggccaag ttaatggcta aacgcattgg 1921 ggtgctaaca ttcgtgttta gcatcctgta cgcgatcttc gaggtgcttg gcgccgttgt 1981 aacagcgtgc caagcaatcc cagtaaggtg agtccttcgg ctcacaaaat cgtttggggg 2041 ttgtacgatg acaacgttcc acaccggccc tcgccccttc cagggtgaga ggcctcatgc 2101 ctactcgcag gcttcgttaa gcgaggaatt gctcggaaat attcggcaat tcaatgaagc 2161 gcaacaagcg gatagtggtc tccgtgtttt gagatcgctg ttatcgcaaa tagtgcggca 2221 cccagcctgg gcagacgcca agccgatcct ccacgccctc aatgggccgg acccggtgaa 2281 gtgtttgccc ttagcgaaat ccctgttgtc acagacgtat gacagcgctg atgagcaatt 2341 catcaaggga caaattggtg cactggtaaa gaagtatcct ttcagtactt cgcgtaaaat 2401 tgcagaagaa gccgggatgc gtgtcttcac gacaggcgaa cggcggaatc ggcacatgaa 2461 cgccctcctt agggcgcgac gcgatgtgca cgcgcagcat gaccttcact ggtcgatgct 2521 tagtatacgc cgttacatta ggcgtgtgct aggcgatgct ccacggtggg acacctaccc 2581 aggtgcatgc aattgggggc ccggaagtaa tgttggtgta acgggccggt tcacgcactt 2641 cgccaggaag ctcttggcgg acgagtggac cgtgacacca gcttgctatc cctacgcatt 2701 gactctggcc aagcgactcc cgatgttttg ggacgagcta ggtttcacgc gatcgctctt 2761 aagtgaggat ggggtgaccc agatcgttgt gacttgtgtg gactcagatg aatttgaagt 2821 ccgcttcaag agtcggtgta agttcgtaga ctataacaag atatcacttg ccaaaaaaga 2881 tgccgataaa gaccgaacta tcgcatcgga gcccctcatg aatcaaatgg tccaaatggc 2941 ctttgaggat gacttgcgca ataggttgct ggcggaaggt ttcgaccttc gtaaccagcg 3001 gcgcaaccaa gactatgccc gggagggcag ccttggcggg ttcaaccccc gttgtaccat 3061 tgatcttcgg aacgcgagtg gcagcatttg tagggaatta ccctatgatt gtcttcctcg 3121 tagttggtgg atcgccttga attcatgccg ctctccgagc tggcactata aaggcaagac 3181 gacccggtat catgggttcg tttctatggg caatgggttc tgtttccccc ttgagactct 3241 aatatttgct gcgatatgca atgctgcgca cgagtattgc gccagtcgac cggactttgt 3301 ggtctatggc gacgatattg tcgtgaggca aagcgaagcc cttgtcgtct tggaattact 3361 gagacgatac ggattcgcag caaacccgga caagaccttt ttattcggtc cttttcggga 3421 gtcctgtgga acagattggc acggcggggt cgatgtacga cctgtgtacc tggacgatga 3481 tctagcaaaa ctagaacatc ggatcagagc ccacaacgca tttgtgagac ttggtagccc 3541 ccaatgggca ccttggttgg cgagccatgt cgccaataac cttccttcct ttgtaagtca 3601 cttcgttcgc ccttgggcgg atgaaactga cgaagcgatt gatgggagat tccacatgat 3661 gcaaccggcc aagtcgacac attgggataa aacaatccaa tgtccggcct ggtatggctt 3721 gatgttcatc cccaaaaggg acaagagcat cgaggggcac tcgcggtttg cgaccgcgtt 3781 gtaccatgcg gcactaaagg gttccgactc tgaaatgccg ttcgccgaac gtcgtgagac 3841 gctggtgagg gtggcacgct tcagccactc gggttcccgg tctacttggg aaccagaggc 3901 tgttcgaccg atggtacggt tgagcagctc gagtctgttc attaaggttt ttgggcctta 3961 gtgccaggct cacagccttc tgcctaatca gcagtagggg ggagacaggg tccgaccgcg 4021 gaagcgggcg ggcaaccttg ccacctcgag ggacgatgca g //