LOCUS BK013736 3420 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage SRR7976310_12 genomic sequence, sequence. ACCESSION BK013736 VERSION BK013736.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage SRR7976310_12 ORGANISM ssRNA phage SRR7976310_12 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Tohvovirus; Tohvovirus borborohabitans. REFERENCE 1 (bases 1 to 3420) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3420) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry SRR7976310 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3420 /organism="ssRNA phage SRR7976310_12" /mol_type="genomic RNA" /isolation_source="activated sludge" /db_xref="taxon:2786674" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Tohvovirus; Tohvovirus SRR7976310_12" gene 89..1291 /gene="SRR7976310_12_1" CDS 89..1291 /gene="SRR7976310_12_1" /codon_start=1 /product="maturation protein" /protein_id="DAD51153.1" /translation="MTTPAQNVNIASAGINTQQQTTSGGVTNPPVMLIRAQSRFVRIR AASVNNPIRIDKTRKPSNWVSKGGYFGQDLGDMRVIHPNGSYRTSSGVLIEPPTSLGS IPTIVSIADGNSYAIRDALGHYAEANMQLGVAMREARGTAELVGKYYQKASQTLGRLD SELRKGENSNFKRAMKDFASGWKSAPSRYLEYIFGLRPLADEINNSLEVLSDKKERGF AFKMKLRGKYKVSDGTKVPRNAMTFCTALVQTNVVQKHKASLIFVLPDWFWDELPPVT SFSEAWQSASLSFILDRMVPVTSWLRGFEGLQLRPFFTEGSSTCFMSRVGTEAFMNPS SGYSAHPSVLPCTWREYYMSRVAYESFPTEAVMRLPRLRNELKLAQMDQYAALAGQRM ANLSRLLR" gene 1316..1687 /gene="SRR7976310_12_2" CDS 1316..1687 /gene="SRR7976310_12_2" /codon_start=1 /product="coat protein" /protein_id="DAD51154.1" /translation="MAITLNTKVYNWGQFDKNGVGQYLETSSGIPTGFSQLTAKVNGD SVGKSRKVKWRLIIPHITIVDTAFAPAGTLLGVDYINLDADLAATGSLADRQDSRLRL AGLVTNAQFISAWDNFVQPSS" gene 1759..3363 /gene="SRR7976310_12_3" CDS 1759..3363 /gene="SRR7976310_12_3" /codon_start=1 /transl_except=(pos:1759..1761,aa:Met) /product="RNA-directed RNA polymerase" /protein_id="DAD51155.1" /translation="MNVKVKETKLKYREFPAKPALLERRDVTHAFFSQTMLSIGFPDI KPSEAIAMPMPDLYQGVRSFRQEYWAAEMWSKHPFELGVDREQAAKLAFYEAETRCKE SNERLYDGWNKPWSNSRRSTLSKARRLISQLIGDITPHEVVRRAGWGPGVSTSLKRSR CSHQHKWEFGAHATKAALPWVTGLFEWASLPDREITLVTGNKVTTVPKNAKTERTIAV EPDWNMFFQRGMGSAIRKRLNRVGLLHPDSQIRNQRLAAAGSQSNTFGTIDLSSASDS VSLALCELLLPAHVFEMMLSLRSSIGTYDGVSASYEKISSMGNGFTFELETLLFWALG TSVTAGGVVCYGDDIIVACHEDGLRVIELLEFCGFKVNAKKTFTTGNFRESCGGHYFK GVDVTPPYFRKPITSTTRYISAANSLSRRISWLDAQYVRMFRDSWRMLSEHVPRKFRG PQTAGDVCLWSTFDKCTPVWEPAWQCFVGKGLRWDRAKSPAPEWGRLQAALHGDTHVE EFATPEEVAKVCYWYADRWSDSVSSF" ORIGIN 1 gccaaataaa acggcggata atcgggacga acccgatggc tttgtaaact agccaggtct 61 gtttgtttac gtaaccaaag gagcacccat gactacaccg gcacaaaatg tcaacatagc 121 atctgctggt attaatactc aacagcagac aaccagcgga ggcgttacta atcctccggt 181 tatgttaatt cgtgcccagt cacgttttgt tcggatacgc gccgcgtcgg ttaacaaccc 241 gattcgcatc gacaaaacga ggaaacccag caattgggtt tctaagggtg gttacttcgg 301 tcaggacttg ggcgatatgc gcgtgattca tccaaatgga tcatatcgta cgtcgtccgg 361 ggtactgatt gaacccccga catcgctagg ttctatccca acaatcgttt cgattgcgga 421 tggaaattct tatgcgattc gggatgctct tggccattac gcagaggcaa atatgcagct 481 gggtgtggcg atgcgcgagg caagaggtac tgcagaactt gttggtaaat actaccaaaa 541 agcgtcccaa actctcggtc gtcttgactc ggagctaagg aaaggagaaa acagcaattt 601 caaaagggcg atgaaagatt tcgcgtctgg atggaagagc gctccttcgc ggtacttaga 661 gtacatcttt ggccttcgtc cgcttgcgga cgagattaac aacagcctgg aggtgctctc 721 cgacaaaaag gaacgtggtt tcgctttcaa aatgaaacta cgtgggaagt acaaagtaag 781 cgatgggact aaagtccccc gcaatgcaat gacgttctgt actgcattgg tgcaaactaa 841 tgtggttcag aaacacaaag cgtcattgat ctttgttcta ccagactggt tctgggatga 901 actaccccct gtgacttctt tctctgaggc gtggcaatcg gcgtcattaa gcttcatcct 961 tgacaggatg gtgcccgtga cgtcgtggct acgcggattt gaagggctgc agctccgacc 1021 tttcttcact gaagggtctt cgacttgttt tatgagtcga gtcggaaccg aggcattcat 1081 gaacccatca tcaggataca gtgcgcatcc tagcgttctg ccctgtacat ggcgcgaata 1141 ttacatgtct cgtgttgctt acgaatcgtt cccaactgaa gcggtcatgc gactgccgag 1201 gctaaggaac gagctgaagc tggcccaaat ggaccagtat gccgcattgg caggccaacg 1261 aatggcgaac ctcagccgtt tgttgcgtta acttaacgag gatcggagag ccacaatggc 1321 aatcactctt aacaccaaag tatacaactg gggccagttc gataagaacg gtgtaggtca 1381 atacctggag acttcttcag gcatacctac gggcttttcg cagctcaccg cgaaggtaaa 1441 cggcgactca gttggaaaga gccgaaaggt gaagtggaga ctaatcatcc cccacatcac 1501 gattgtcgac acagcgttcg cgccagccgg caccctcctg ggtgtcgact atattaattt 1561 agacgcggac cttgcggcaa ctggatcttt ggcggaccgt caggactctc gacttcggtt 1621 ggccggtctt gtcaccaacg cacagtttat cagtgcctgg gacaatttcg ttcaaccatc 1681 gtcttaagcc attccggcta gggcaatgga aatcccgaga agggattacg gttttttcat 1741 agtaaaggag atccttctgt gaatgtcaaa gtgaaagaga ccaaactcaa gtatagggag 1801 ttcccggcaa agccggccct acttgagcgt cgcgatgtaa ctcacgcttt ctttagccaa 1861 accatgttgt ctattggttt tcccgacata aaaccgtcgg aggctattgc tatgccaatg 1921 cccgacctct atcaaggggt tcggagcttc agacaggagt attgggctgc agaaatgtgg 1981 tctaaacatc cttttgagct tggtgtggat agggagcaag ctgcaaagct tgccttctat 2041 gaggctgaaa cacggtgtaa agaatcgaac gaaaggcttt atgacggatg gaacaaacct 2101 tggagtaatt caaggcgttc tactcttagt aaggcccgta ggttgatctc gcagcttatt 2161 ggggatataa ctcctcatga ggttgtgcgc cgtgcgggat ggggaccggg tgtttccacc 2221 agtttaaaac ggtctcgatg ctcgcatcaa cataagtggg aatttggtgc ccacgcgacg 2281 aaagcagcct taccctgggt cacaggcctg tttgaatggg cttcattacc tgatcgtgag 2341 atcacgttag tgaccgggaa taaggtaacc actgtaccaa agaacgcaaa aaccgaacgg 2401 acgattgcag ttgaacctga ctggaatatg ttctttcaac ggggaatggg cagcgcgatt 2461 cggaaaagat tgaatcgtgt tggcttgctt caccctgata gtcagatccg aaaccagcgg 2521 cttgctgccg ctgggtctca gagtaacact tttgggacaa tagatctgtc tagtgctagc 2581 gactctgtgt cgttggctct ttgcgaactc ctgctacccg cccatgtctt cgagatgatg 2641 ttaagtcttc gaagctctat cggaacgtac gatggcgttt ctgcgtcgta tgaaaagata 2701 tccagcatgg gaaacgggtt caccttcgaa ctcgaaacgc ttcttttttg ggcgttaggg 2761 acgtcggtta ctgcaggggg tgtggtctgt tacggtgatg atatcatcgt ggcctgccat 2821 gaagacggcc ttagggtcat agagctcctt gagttttgtg gttttaaggt aaatgccaag 2881 aagacgttca ctacgggaaa ctttcgagaa tcctgtggtg gacattactt caaaggcgtt 2941 gacgtcactc ctccttactt tcgcaaaccg attacgagca cgacgaggta tatctcggcc 3001 gcgaatagcc tatctaggcg aatttcgtgg ctggatgccc agtacgtacg tatgtttcgc 3061 gattcatggc gcatgctctc agagcacgtt ccacgtaagt ttcgagggcc tcagaccgcg 3121 ggcgatgttt gcctatggtc aaccttcgat aagtgcactc ccgtctggga accggcctgg 3181 caatgttttg tcgggaaggg ccttagatgg gaccgggcga agagcccggc acctgagtgg 3241 ggtcgcttac aagcagccct acatggtgac acgcacgttg aggagtttgc taccccggaa 3301 gaggtagcga aagtctgcta ttggtatgca gaccggtgga gcgactcggt gtccagcttc 3361 taaggacact tttccggttg agtcataacc ggggatacca tacgtccatg tatggctagg //