LOCUS       BK013737                3922 bp    RNA     linear   VRL 09-FEB-2021
DEFINITION  TPA_asm: SsRNA phage SRR7976323_5 genomic sequence.
ACCESSION   BK013737
VERSION     BK013737.1
KEYWORDS    Third Party Data; TPA; TPA:assembly.
SOURCE      ssRNA phage SRR7976323_5
  ORGANISM  ssRNA phage SRR7976323_5
            Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes;
            Timlovirales; Steitzviridae; Tsuhreavirus; Tsuhreavirus
            borborovivens.
REFERENCE   1  (bases 1 to 3922)
  AUTHORS   Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H.,
            Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C.
  TITLE     Leviviricetes taxonomy
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3922)
  AUTHORS   Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H.,
            Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland,
            Western Road, Cork T12YT20, Ireland
COMMENT     THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from
            DDBJ/EMBL/GenBank entry SRR7976323
            
            ##Assembly-Data-START##
            Assembly Method       :: metaSPAdes v. v3.11.1
            Sequencing Technology :: Illumina
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..3922
                     /organism="ssRNA phage SRR7976323_5"
                     /mol_type="genomic RNA"
                     /isolation_source="activated sludge"
                     /db_xref="taxon:2786692"
                     /country="Japan"
                     /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota;
                     Leviviricetes; Timlovirales; Steitzviridae; Tsuhreavirus;
                     Tsuhreavirus SRR7976323_5"
     gene            37..1395
                     /gene="SRR7976323_5_1"
     CDS             37..1395
                     /gene="SRR7976323_5_1"
                     /codon_start=1
                     /product="maturation protein"
                     /protein_id="DAD51156.1"
                     /translation="MGTVLSTFQYDPKSRDYRDRITMDRSPKFRIVSSGNVSPDLAFG
                     SYKRIIDSSKTSTHNYLYKNPRNLLAHGVNTNIFVDTGGPLWIEEFSICDPPRVHVGR
                     KDWSGRLVEDFDGPFIVNRDHYSMYRSMALQKFDPQPLLGLAGKTFSEMCAYGSTGIS
                     RSIPTIPLTSTFTILGELREGLASIPGRQLYKLMKESPKWANRIQLLSKGGSSEFLNW
                     IFGLAPTLKDVDNLYAINTDDVKQIRSKLNGEVHKIYKRRRVVEKEHVETTDGNVDYP
                     QYTPSIYVLSGGWCQNTVVTDSKVWFSGAFDHSAWAPTIDSRLNDLLNAGEDLGLLPT
                     ADRFWQLIPYSWLVDWFLNFGDVLTNISFLGRSGMQMLYGYVMADTTRTRTSTWSGYV
                     NGHYSNFTTVSSERIRQRVRATPYGFGLKLQDLSPMQLAILASLGITRTKLIRSGSIP
                     KP"
     gene            1440..1808
                     /gene="SRR7976323_5_2"
     CDS             1440..1808
                     /gene="SRR7976323_5_2"
                     /codon_start=1
                     /product="coat protein"
                     /protein_id="DAD51157.1"
                     /translation="MFTDPISVTIASVATSFPRVGTGNLSSVYRSADGMLTLDIGHQD
                     LAKGTRESTLVRLTRKAVGSDPLNSALSKAYESRVHLVFNTPANGVGISDATVKADIQ
                     ALCAWIGTSGNLDKLLGKES"
     gene            1853..1981
                     /gene="SRR7976323_5_3"
     CDS             1853..1981
                     /gene="SRR7976323_5_3"
                     /codon_start=1
                     /transl_except=(pos:1853..1855,aa:Met)
                     /product="hypothetical protein"
                     /protein_id="DAD51158.1"
                     /translation="MSMPERAIEVRSAVWPGGPWLVGILVIAMLFSIVFALGTLIG"
     gene            2037..3833
                     /gene="SRR7976323_5_4"
     CDS             2037..3833
                     /gene="SRR7976323_5_4"
                     /codon_start=1
                     /product="RNA-directed RNA polymerase"
                     /protein_id="DAD51159.1"
                     /translation="MKSLTRLWLVLAQELGSRCSVDVTHDIKTVECRVEHEGLSLFTI
                     AMPDLCSFFESCLEEGYMDASLLPGWKTGKGRKIPAFLQGFFCLVFDRETGRILGNSS
                     RQSDAVFAIRQLLLLYKKMKMDPTERRIQAAIAGYVSCEQELKEGEKTVRLGTLPQTF
                     AWLFSTILNTLTREIDNFELNPKHGPGATADKKKGNKKFLFDRWTWRLESVFPSSEYA
                     VPNYRYFNGDNLAFDTPEQELPVKVVFVPKTQKAPRIIAEEPSYIQYCQQAIACRLKD
                     LISQSDLVGPMMDMNDQTRNRELARLGSITGRLSTIDLSEASDRVLNSTVVALFKPWP
                     SVLEAIQATRSRRALLPNGQTVRLSKFASMGSALCFPVETMVFLTIVVDACLRGGDVT
                     RISEHDIKSLHGSVSVYGDDIIVPSYTATDVMKLLQDNLLKVNTSKSFIHGPFKESCG
                     GDYFYGFNVTPIKVRRLPSSHLTDEDFVSLCATRNQFYWHGLWQTAGWMDEYLHAQRR
                     AYTIVPRKSNGVGRESVLLSSEDKWNNRLQMFETLCLVDIAKAPENKISGAAALHKCL
                     AGDFKDPLYDGHLLRSGRTSSVNLKRKGVPAG"
ORIGIN      
        1 cctcacggct cttcaccact acacctaggg ggacctatgg gaactgtttt gagtactttt
       61 cagtacgatc caaaatctcg agattatcga gatcggataa ctatggacag aagtccaaag
      121 tttaggattg taagtagcgg taacgtctcg cctgaccttg cattcggctc ttataagcga
      181 atcatagatt caagcaagac atctacccat aactacttat ataaaaatcc tcgtaatctg
      241 ttagctcacg gtgtcaacac caatatcttc gtagatactg gtggtccact atggatcgaa
      301 gaattttcga tctgcgaccc tccacgcgtc catgtaggac gtaaagattg gagtggtcgg
      361 ctggtggaag actttgatgg cccgtttatt gttaaccggg accattatag tatgtacaga
      421 tctatggctt tacaaaagtt tgacccgcag ccccttctag ggcttgctgg taagactttt
      481 agcgagatgt gtgcatacgg gagcacgggt atttcccgta gtattcctac aattcccctc
      541 acttctacgt tcaccatcct cggcgagctc agggaaggac ttgcgtccat tcctggccgt
      601 cagctttaca agttgatgaa ggagtcgcct aaatgggcta accgaattca acttttgagc
      661 aagggtggga gttccgaatt ccttaattgg atattcggtc ttgctccgac tcttaaggat
      721 gttgataatc tgtacgccat caatactgat gacgttaaac agatccgtag taaactcaat
      781 ggagaagtcc ataagattta caaacggcgt agagtggttg agaaggagca tgtagagaca
      841 acagatggta atgtggatta tccacaatac actccgtcta tctacgtcct gtccggagga
      901 tggtgtcaga acacagttgt gactgattcc aaagtctggt tctcaggagc ctttgatcat
      961 tctgcatggg caccaacgat tgattctcgt cttaatgact tgctcaacgc tggagaagac
     1021 cttggtcttc tacctactgc agatcgattt tggcagctca ttccctattc ctggcttgtc
     1081 gattggtttc tgaattttgg tgatgtactt accaacatca gtttcctagg caggtcaggg
     1141 atgcaaatgc tctatggtta cgtcatggcc gatacaactc ggacccgtac gtcgacctgg
     1201 tcgggttatg tcaacggaca ttactcgaac ttcacgactg tttcatctga aaggattcga
     1261 cagcgtgtta gggcaactcc ctatggtttt ggcctaaagc tacaggactt aagtcctatg
     1321 cagctggcca ttcttgcttc gctcgggata acccgaacga aactcataag gtcaggttcg
     1381 ataccgaaac cctgatttca taacaacaga ataacaactg aatcccgaag gagtctctca
     1441 tgttcactga tcccattagc gtcactattg ctagtgtcgc cacatcgttc cctcgcgtcg
     1501 gaaccggaaa ccttagttcg gtttaccggt ctgccgacgg catgcttact cttgacattg
     1561 gtcatcaaga ccttgccaag ggtacgcggg aatccacgct cgtccgactg acccgaaagg
     1621 cagtcggttc tgacccgttg aactccgcgc tgagcaaggc ttatgaaagc cgtgttcacc
     1681 tggtgttcaa cacccctgca aatggggtag gcatctctga tgccacggtc aaggctgata
     1741 tccaggcgct ctgcgcttgg atcggcacct ccggtaacct cgacaagctt ctgggtaagg
     1801 agtcctgaaa gggacctctt aaacagacgc tcttaagtcg aggagacttg aagtgtcaat
     1861 gcctgaacgt gcaatcgaag ttcgctcggc tgtttggcct ggcggaccgt ggttggtggg
     1921 tatcctcgtc attgcaatgc tgtttagcat tgtgtttgcg ttgggtacgc taatcggctg
     1981 agaagccgac agtgaacgta taagtgactc gttagccatt tcaccgaaag gtaacgatga
     2041 aaagccttac gagactctgg ttggtcctgg ctcaagagct aggttctagg tgtagcgtag
     2101 acgttacaca cgacattaaa accgtcgagt gtcgcgtcga gcacgagggg ctatctctat
     2161 ttacaatagc gatgcccgac ctgtgctcct tcttcgaatc ttgtcttgaa gaagggtaca
     2221 tggacgcctc tctacttcct ggttggaaaa ccgggaaggg gaggaagatc cctgcatttt
     2281 tgcaaggttt cttctgcctc gtgttcgacc gggaaaccgg tcgtatactt ggtaatagca
     2341 gccgtcaatc tgatgcagtt tttgctatca gacagcttct acttctttat aagaagatga
     2401 agatggatcc taccgaaagg cggattcaag ctgcaattgc cgggtatgtc tcttgtgaac
     2461 aagagcttaa ggaaggtgaa aagactgttc gtcttggcac gcttccccag acctttgctt
     2521 ggttgttctc tactatcttg aacacgctta cgcgtgagat tgataatttt gaacttaatc
     2581 ccaaacatgg gccaggtgct acagccgata agaagaaggg aaacaagaaa tttctcttcg
     2641 accgttggac gtggcgtctg gaatcagtat ttccttcatc ggaatatgct gttccgaact
     2701 atcgctattt taatggcgat aacctagctt ttgacacacc tgaacaggaa ctacctgtta
     2761 aggtagtttt cgttccaaag acgcaaaaag cgcccagaat catcgctgaa gaaccgagtt
     2821 acattcagta ctgccagcaa gcaattgctt gcagactgaa agacttgatt tctcagtctg
     2881 acctggttgg ccccatgatg gacatgaacg atcaaactcg caatcgcgag cttgcacgtc
     2941 taggttccat tacgggtcgg ctctcgacta ttgacctctc tgaggctagt gatcgagtgc
     3001 taaattctac cgttgttgcc ctttttaaac catggccttc agttttggag gccatacagg
     3061 caacacgctc tagaagagct ctcttaccca acggacagac tgttcgtttg agtaagttcg
     3121 cgtctatggg ttccgcgctg tgcttcccag tcgaaacaat ggttttcttg accattgtag
     3181 tcgatgcttg cctgcgcggg ggagacgtga cacgaatctc tgaacatgac attaagtcac
     3241 ttcatgggtc cgtgtccgta tacggggacg atattatcgt tccttcgtat acagctactg
     3301 atgtgatgaa acttcttcaa gataatctct tgaaggtaaa cacctcgaaa agctttatac
     3361 atggtccctt taaggaatca tgtggaggtg attacttcta tggcttcaac gtcacaccta
     3421 ttaaggtgag gcgcttgcct tcatcacacc taacggatga agacttcgtt agtctgtgcg
     3481 cgacccgtaa ccaattttat tggcacggac tgtggcagac tgcgggttgg atggatgagt
     3541 atctacacgc ccaaaggcgt gcatatacca tcgtcccacg aaagtctaat ggagtaggtc
     3601 gcgaatcggt ccttttatct tcggaagata agtggaataa tcgcctccag atgtttgaga
     3661 ctctttgtct cgtcgacatc gcaaaagctc ctgagaataa aatctcgggt gcagctgcac
     3721 tccacaagtg ccttgcaggg gactttaaag accccctgta cgacggtcac ttgctccgtt
     3781 caggacgtac ttcctccgtc aacctaaaga ggaagggagt tcctgctggc taactggtca
     3841 gcaggattgg gtaggacgcg agtcctacct tgggggaaca atgttattat tggaatttat
     3901 tccaataatg cagtgtattc cc
//
