locus_tag old_locus_tag gene Name start end strand product note type ID NCBI 308737 309513 + not in design of JCVI-syn1%3B disrupts ctpA%3B acquired from Eschericha coli during BAC cloning step mobile_genetic_element id321 http://www.ncbi.nlm.nih.gov/gene/?term= MMSYN1_0001 MMSYN1_0001 dnaA_1 dnaA_1 1 1353 + chromosomal replication initiator protein DnaA identified by match to protein family HMM PF00308%3B match to protein family HMM PF08299%3B match to protein family HMM TIGR00362 gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0001 MMSYN1_0002 MMSYN1_0002 dnaN dnaN 1511 2638 + DNA polymerase III%2C beta subunit identified by match to protein family HMM PF00712%3B match to protein family HMM PF02767%3B match to protein family HMM PF02768%3B match to protein family HMM TIGR00663 gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0002 MMSYN1_0003 MMSYN1_0003 rnmV rnmV 2675 3217 + ribonuclease M5 identified by match to protein family HMM PF01751%3B match to protein family HMM TIGR00334 gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0003 MMSYN1_0004 MMSYN1_0004 ksgA ksgA 3207 4007 + dimethyladenosine transferase identified by match to protein family HMM PF00398%3B match to protein family HMM TIGR00755 gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0004 MMSYN1_0005 MMSYN1_0005 MMSYN1_0005 4064 5155 + hypothetical purine NTPase gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0005 MMSYN1_0006 MMSYN1_0006 gyrB gyrB 5515 7419 + DNA gyrase%2C B subunit identified by match to protein family HMM PF00204%3B match to protein family HMM PF00986%3B match to protein family HMM PF01751%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR01059 gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0006 MMSYN1_0007 MMSYN1_0007 gyrA gyrA 7435 9939 + DNA gyrase%2C A subunit identified by match to protein family HMM PF00521%3B match to protein family HMM PF03989%3B match to protein family HMM TIGR01063 gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0007 MMSYN1_0008 MMSYN1_0008 MMSYN1_0008 9991 10968 - ribose/Galactose ABC transporter%2C permease component II identified by match to protein family HMM PF02653 gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0008 MMSYN1_0009 MMSYN1_0009 MMSYN1_0009 10968 13535 - ABC transporter%2C permease protein identified by match to protein family HMM PF02653 gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0009 MMSYN1_0010 MMSYN1_0010 MMSYN1_0010 13525 15141 - ribose/Galactose ABC transporter%2C ATP-binding component identified by match to protein family HMM PF00005 gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0010 MMSYN1_0011 MMSYN1_0011 MMSYN1_0011 15153 16799 - ribose/galactose ABC transporter%2C substrate-binding component gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0011 MMSYN1_0012 MMSYN1_0012 metG metG 16986 18515 - methionine--tRNA ligase identified by match to protein family HMM PF09334%3B match to protein family HMM TIGR00398 gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0012 MMSYN1_0013 MMSYN1_0013 MMSYN1_0013 18716 20302 + mycoides cluster lipoprotein%2C LppA/P72 family identified by match to protein family HMM TIGR03490 gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0013 MMSYN1_0014 MMSYN1_0014 MMSYN1_0014 20317 21831 + mycoides cluster lipoprotein%2C LppA/P72 family identified by match to protein family HMM TIGR03490 gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0014 MMSYN1_0015 MMSYN1_0015 MMSYN1_0015 21864 23393 + mycoides cluster lipoprotein%2C LppA/P72 family identified by match to protein family HMM TIGR03490 gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0015 MMSYN1_0016 MMSYN1_0016 MMSYN1_0016 23411 25009 + mycoides cluster lipoprotein%2C LppA/P72 family identified by match to protein family HMM TIGR03490 gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0016 MMSYN1_0019 MMSYN1_0019 MMSYN1_0019 36687 37673 - mannitol-1-phosphate 5-dehydrogenase identified by match to protein family HMM PF01232%3B match to protein family HMM PF08125 gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0019 MMSYN1_0020 MMSYN1_0020 MMSYN1_0020 37674 38471 - transcriptional regulator%2C RpiR family identified by match to protein family HMM PF01380%3B match to protein family HMM PF01418 gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0020 MMSYN1_0021 MMSYN1_0021 MMSYN1_0021 38505 38921 - PTS system%2C mannitol-permease iia component identified by match to protein family HMM PF00359 gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0021 MMSYN1_0022 MMSYN1_0022 MMSYN1_0022 38921 39679 - sorbitol-6-phosphate 2-dehydrogenase (Glucitol-6-phosphate dehydrogenase) (Ketosephosphate reductase) identified by match to protein family HMM PF00106 gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0022 MMSYN1_0023 MMSYN1_0023 MMSYN1_0023 39679 41238 - PTS system%2C mannitol-permease iibc component identified by match to protein family HMM PF02302%3B match to protein family HMM PF02378 gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0023 MMSYN1_0024 MMSYN1_0024 MMSYN1_0024 41509 42891 - divergent AAA domain family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF04326 pseudogene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0024 MMSYN1_0025 MMSYN1_0025 rpsR rpsR 43284 43511 - ribosomal protein S18 identified by match to protein family HMM PF01084%3B match to protein family HMM TIGR00165 gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0025 MMSYN1_0026 MMSYN1_0026 MMSYN1_0026 43531 43971 - single-strand binding protein identified by match to protein family HMM PF00436%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00621 gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0026 MMSYN1_0027 MMSYN1_0027 MMSYN1_0027 43983 44396 - 30S ribosomal protein S6 identified by match to protein family HMM PF01250%3B match to protein family HMM TIGR00166 gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0027 MMSYN1_0028 MMSYN1_0028 MMSYN1_0028 44601 44810 - cold-shock DNA-binding domain%2C putative identified by match to protein family HMM PF00313 gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0028 MMSYN1_0029 MMSYN1_0029 MMSYN1_0029 44998 45597 + fmn-dependent NADH-azoreductase (fmn-dependent nadh-azocompound oxidoreductase) (azo-dye reductase) identified by match to protein family HMM PF02525 gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0029 MMSYN1_0030 MMSYN1_0030 MMSYN1_0030 45634 46668 - abc transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0030 MMSYN1_0031 MMSYN1_0031 hslO hslO 46716 47582 - chaperonin HslO identified by match to protein family HMM PF01430 gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0031 MMSYN1_0032 MMSYN1_0032 MMSYN1_0032 47674 50835 - GnsA/GnsB family identified by match to protein family HMM PF08178 gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0032 MMSYN1_0033 MMSYN1_0033 MMSYN1_0033 50958 54116 - hypothetical protein identified by glimmer%3B putative gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0033 MMSYN1_0034 MMSYN1_0034 MMSYN1_0034 54281 59650 + efflux ABC transporter%2C permease protein identified by match to protein family HMM PF02687 gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0034 MMSYN1_0035 MMSYN1_0035 MMSYN1_0035 59775 60968 + conserved hypothetical protein identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0035 MMSYN1_0036 MMSYN1_0036 MMSYN1_0036 61277 62263 + D-lactate dehydrogenase identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826 gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0036 MMSYN1_0037 MMSYN1_0037 MMSYN1_0037 62282 63406 + malate permease identified by match to protein family HMM PF03547 gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0037 MMSYN1_0038 MMSYN1_0038 MMSYN1_0038 63762 65045 + conserved hypothetical protein gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0038 MMSYN1_0039 MMSYN1_0039 MMSYN1_0039 65087 67033 - peptidase%2C M41 family identified by match to protein family HMM PF00004%3B match to protein family HMM PF01434%3B match to protein family HMM PF06480%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR01241 gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0039 MMSYN1_0040 MMSYN1_0040 MMSYN1_0040 68094 69299 - tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) identified by match to protein family HMM PF01171%3B match to protein family HMM TIGR02432 gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0040 MMSYN1_0041 MMSYN1_0041 MMSYN1_0041 67265 68110 + conserved hypothetical protein gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0041 MMSYN1_0042 MMSYN1_0042 MMSYN1_0042 69302 70129 - transcriptional regulator%2C RpiR family protein identified by match to protein family HMM PF01418 gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0042 MMSYN1_0043 MMSYN1_0043 MMSYN1_0043 70181 70903 - methyltransferase identified by match to protein family HMM PF01170%3B match to protein family HMM PF05175 gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0043 MMSYN1_0044 MMSYN1_0044 MMSYN1_0044 70903 71643 - DNA polymerase III delta subunit gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0044 MMSYN1_0045 MMSYN1_0045 tmk tmk 71621 72262 - dTMP kinase identified by match to protein family HMM PF02223%3B match to protein family HMM TIGR00041 gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0045 MMSYN1_0046 MMSYN1_0046 MMSYN1_0046 72265 72855 - DNA repair protein RecM identified by match to protein family HMM PF01751%3B match to protein family HMM PF02132 gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0046 MMSYN1_0047 MMSYN1_0047 dnaX dnaX 72857 74863 - DNA polymerase III%2C gamma/tau subunit identified by match to protein family HMM PF00004%3B match to protein family HMM TIGR02397 gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0047 MMSYN1_0048 MMSYN1_0048 MMSYN1_0048 74945 75412 - cytosine deaminase identified by match to protein family HMM PF00383 gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0048 MMSYN1_0049 MMSYN1_0049 srpB srpB 75393 75491 - Bacterial signal recognition particle RNA gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0049 MMSYN1_0050 MMSYN1_0050 guaC guaC 75529 76491 - GMP reductase identified by match to protein family HMM PF00478%3B match to protein family HMM TIGR01306 gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0050 MMSYN1_0051 MMSYN1_0051 MMSYN1_0051 76906 77202 - conserved hypothetical protein gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0051 MMSYN1_0052 MMSYN1_0052 MMSYN1_0052 77327 77647 - hypothetical protein identified by glimmer%3B putative gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0052 MMSYN1_0053 MMSYN1_0053 MMSYN1_0053 77755 79851 - putative liporotein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0053 MMSYN1_0054 MMSYN1_0054 MMSYN1_0054 80000 80449 - AhpC/TSA family protein identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534 gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0054 MMSYN1_0055 MMSYN1_0055 mmyCVR mmyCVR 80688 81977 - GATC--recognizing Type II restriction modification system (MmyCV) endonuclease subunit gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0055 MMSYN1_0056 MMSYN1_0056 mmyC5VM mmyC5VM 81979 82818 - GATC--recognizing Type II restriction modification system (MmyCV) adenine DNA methyltransferase subunit identified by match to protein family HMM PF02086%3B match to protein family HMM TIGR00571 gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0056 MMSYN1_0057 MMSYN1_0057 MMSYN1_0057 83287 83577 + conserved hypothetical protein gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0057 MMSYN1_0058 MMSYN1_0058 MMSYN1_0058 83596 84177 + conserved hypothetical protein gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0058 MMSYN1_0059 MMSYN1_0059 ald ald 84292 85410 + alanine dehydrogenase identified by match to protein family HMM PF01262%3B match to protein family HMM PF05222%3B match to protein family HMM TIGR00518 gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0059 MMSYN1_0060 MMSYN1_0060 MMSYN1_0060 85704 86528 + putative membrane protein gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0060 MMSYN1_0061 MMSYN1_0061 serS serS 86611 87879 + serine--tRNA ligase identified by match to protein family HMM PF00587%3B match to protein family HMM PF02403%3B match to protein family HMM TIGR00414 gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0061 MMSYN1_0062 MMSYN1_0062 MMSYN1_0062 87981 88295 + conserved hypothetical protein identified by match to protein family HMM PF08921 gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0062 MMSYN1_0063 MMSYN1_0063 MMSYN1_0063 88297 89271 + tRNA-dihydrouridine synthase B identified by match to protein family HMM PF01207%3B match to protein family HMM TIGR00737 gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0063 MMSYN1_0064 MMSYN1_0064 lysS lysS 89274 90776 + lysine--tRNA ligase identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00499 gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0064 MMSYN1_0065 MMSYN1_0065 trxA trxA 90866 91174 - thioredoxin identified by match to protein family HMM PF00085%3B match to protein family HMM TIGR01068 gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0065 MMSYN1_0066 MMSYN1_0066 MMSYN1_0066 91185 92027 - putative hydrolase of the HAD family identified by match to protein family HMM PF08282%3B match to protein family HMM TIGR01484 gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0066 MMSYN1_0067 MMSYN1_0067 rrf rrf 92148 92256 - 5S ribosomal RNA rRNA gene72 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0067 MMSYN1_0068 MMSYN1_0068 rrl rrl 92331 95225 - 23S ribosomal RNA rRNA gene73 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0068 MMSYN1_0069 MMSYN1_0069 rrs rrs 95457 96980 - 16S ribosomal RNA rRNA gene74 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0069 MMSYN1_0070 MMSYN1_0070 MMSYN1_0070 97263 97346 - tRNA-Leu tRNA gene75 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0070 MMSYN1_0071 MMSYN1_0071 MMSYN1_0071 97349 97424 - tRNA-Lys tRNA gene76 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0071 MMSYN1_0072 MMSYN1_0072 MMSYN1_0072 97603 99669 + putative membrane protein gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0072 MMSYN1_0073 MMSYN1_0073 MMSYN1_0073 99702 102434 - phosphonate ABC transporter%2C permease protein PhnE%2C putative identified by match to protein family HMM PF00528 gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0073 MMSYN1_0074 MMSYN1_0074 phnC phnC 102438 103190 - phosphonate ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR02315 gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0074 MMSYN1_0075 MMSYN1_0075 MMSYN1_0075 103204 104574 - phosphonate ABC transporter%2C phosphonate-binding protein%2C putative gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0075 MMSYN1_0076 MMSYN1_0076 asnS asnS 104866 106230 - asparagine--tRNA ligase identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00457 gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0076 MMSYN1_0077 MMSYN1_0077 MMSYN1_0077 106239 107078 - putative hydrolase of the HAD family identified by match to protein family HMM PF08282 gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0077 MMSYN1_0078 MMSYN1_0078 MMSYN1_0078 107089 108219 - putative hydrolase from alpha/beta family gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0078 MMSYN1_0079 MMSYN1_0079 MMSYN1_0079 108243 109199 - probable O-sialoglycoprotein endopeptidase (Glycoprotease) identified by match to protein family HMM PF00814%3B match to protein family HMM TIGR00329%3B match to protein family HMM TIGR03723 gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0079 MMSYN1_0080 MMSYN1_0080 MMSYN1_0080 109294 109515 - conserved hypothetical protein gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0080 MMSYN1_0081 MMSYN1_0081 trmE trmE 109715 111073 + tRNA modification GTPase TrmE identified by match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00450 gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0081 MMSYN1_0082 MMSYN1_0082 rpsT rpsT 111124 111369 - ribosomal protein S20 identified by match to protein family HMM PF01649%3B match to protein family HMM TIGR00029 gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0082 MMSYN1_0083 MMSYN1_0083 MMSYN1_0083 111503 112138 - conserved hypothetical protein gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0083 MMSYN1_0084 MMSYN1_0084 MMSYN1_0084 112555 113967 - putative liporotein gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0084 MMSYN1_0085 MMSYN1_0085 MMSYN1_0085 114118 116367 - putative liporotein gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0085 MMSYN1_0086 MMSYN1_0086 MMSYN1_0086 116412 117539 - putative liporotein gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0086 MMSYN1_0087 MMSYN1_0087 MMSYN1_0087 118095 118508 - cell wall anchoring protein gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0087 MMSYN1_0088 MMSYN1_0088 MMSYN1_0088 118767 120617 - conserved hypothetical protein gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0088 MMSYN1_0089 MMSYN1_0089 MMSYN1_0089 120876 122567 - putative liporotein gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0089 MMSYN1_0092 MMSYN1_0092 MMSYN1_0092 123560 126049 - putative liporotein gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0092 MMSYN1_0093 MMSYN1_0093 MMSYN1_0093 126220 126990 - putative liporotein gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0093 MMSYN1_0094 MMSYN1_0094 MMSYN1_0094 126974 127690 - putative membrane protein gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0094 MMSYN1_0095 MMSYN1_0095 secA secA 127805 130639 - preprotein translocase%2C SecA subunit identified by match to protein family HMM PF00271%3B match to protein family HMM PF01043%3B match to protein family HMM PF07516%3B match to protein family HMM PF07517%3B match to protein family HMM TIGR00963 gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0095 MMSYN1_0096 MMSYN1_0096 MMSYN1_0096 130730 131305 + Xaa-Pro dipeptidase identified by match to protein family HMM PF01205 gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0096 MMSYN1_0097 MMSYN1_0097 MMSYN1_0097 131380 132291 + dna polymerase I%2C 5'-3' exonuclease identified by match to protein family HMM PF01367%3B match to protein family HMM PF02739 gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0097 MMSYN1_0098 MMSYN1_0098 mmyCVIM1 mmyCVIM1 132495 133511 + CCATC--recognizing Type II restriction modification system (MmyCVI) adenine DNA methyltransferase subunit 1 identified by match to protein family HMM PF02086 gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0098 MMSYN1_0099 MMSYN1_0099 mmyCVIM2 mmyCVIM2 133501 134418 + CCATC--recognizing Type II restriction modification system (MmyCVI) adenine DNA methyltransferase subunit 2 identified by match to protein family HMM PF02086 gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0099 MMSYN1_0100 MMSYN1_0100 mmyCVIR mmyCVIR 134396 135979 + CCATC--recognizing Type II restriction modification system (MmyCVI) endonuclease subunit identified by match to protein family HMM PF09491 gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0100 MMSYN1_0101 MMSYN1_0101 MMSYN1_0101 136419 137714 + ATPase gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0101 MMSYN1_0102 MMSYN1_0102 MMSYN1_0102 138374 138649 + conserved hypothetical protein gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0102 MMSYN1_0103 MMSYN1_0103 coaE coaE 138651 139208 + dephospho-CoA kinase identified by match to protein family HMM PF01121%3B match to protein family HMM TIGR00152 gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0103 MMSYN1_0104 MMSYN1_0104 rrmJ rrmJ 139210 140016 - ribosomal RNA large subunit methyltransferase J identified by match to protein family HMM PF01479%3B match to protein family HMM PF01728 gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0104 MMSYN1_0105 MMSYN1_0105 MMSYN1_0105 140016 140231 - conserved domain protein gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0105 MMSYN1_0106 MMSYN1_0106 xseA xseA 140221 141630 - exodeoxyribonuclease VII%2C large subunit identified by match to protein family HMM PF01336%3B match to protein family HMM PF02601%3B match to protein family HMM TIGR00237 gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0106 MMSYN1_0107 MMSYN1_0107 nusB nusB 141632 142030 - transcription antitermination factor NusB identified by match to protein family HMM PF01029%3B match to protein family HMM TIGR01951 gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0107 MMSYN1_0108 MMSYN1_0108 MMSYN1_0108 142042 143154 - putative liporotein gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0108 MMSYN1_0109 MMSYN1_0109 MMSYN1_0109 143180 144049 - apurinic endonuclease Apn1 identified by match to protein family HMM PF01261%3B match to protein family HMM TIGR00587 gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0109 MMSYN1_0110 MMSYN1_0110 MMSYN1_0110 144042 144794 - riboflavin kinase identified by match to protein family HMM PF01687 gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0110 MMSYN1_0111 MMSYN1_0111 MMSYN1_0111 144869 144944 - tRNA-Lys tRNA gene115 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0111 MMSYN1_0112 MMSYN1_0112 MMSYN1_0112 145008 147287 - peptidase%2C S41 family identified by match to protein family HMM PF03572 gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0112 MMSYN1_0113 MMSYN1_0113 MMSYN1_0113 147625 148869 + glycosyltransferase identified by match to protein family HMM PF00535 gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0113 MMSYN1_0114 MMSYN1_0114 MMSYN1_0114 148943 149863 - glycosyltransferase gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0114 MMSYN1_0115 MMSYN1_0115 MMSYN1_0115 150311 151183 - utp--glucose-1-phosphate uridylyltransferase (udp-glucosepyrophosphorylase) (udpgp) (alpha-d-glucosyl-1-phosphateuridylyltransferase) (uridine diphosphoglucose pyrophosphorylase)(general stress protein 33) (Gsp33) identified by match to protein family HMM PF00483 gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0115 MMSYN1_0116 MMSYN1_0116 MMSYN1_0116 151368 151808 - conserved hypothetical protein gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0116 MMSYN1_0117 MMSYN1_0117 plsY plsY 151878 152639 + acyl-phosphate glycerol 3-phosphate acyltransferase identified by match to protein family HMM PF02660%3B match to protein family HMM TIGR00023 gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0117 MMSYN1_0118 MMSYN1_0118 MMSYN1_0118 152703 154241 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0118 MMSYN1_0119 MMSYN1_0119 MMSYN1_0119 154271 155068 - hydrolase%2C TatD family identified by match to protein family HMM PF01026 gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0119 MMSYN1_0120 MMSYN1_0120 ilvA ilvA 155264 156490 + threonine ammonia-lyase identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01127 gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0120 MMSYN1_0121 MMSYN1_0121 MMSYN1_0121 156705 158285 + putative membrane protein gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0121 MMSYN1_0122 MMSYN1_0122 MMSYN1_0122 158297 159157 + conserved hypothetical protein gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0122 MMSYN1_0123 MMSYN1_0123 vlcD vlcD 159440 160150 + lipoprotein%2C putative (VlcD) gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0123 MMSYN1_0124 MMSYN1_0124 MMSYN1_0124 160552 161883 + hexosephosphate transport protein identified by match to protein family HMM PF07672%3B match to protein family HMM PF07690 gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0124 MMSYN1_0125 MMSYN1_0125 MMSYN1_0125 162231 163934 + PTS system%2C N-acetylglucosamine-specific iibc component identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378 gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0125 MMSYN1_0126 MMSYN1_0126 gltX gltX 164067 165518 + glutamate--tRNA ligase identified by match to protein family HMM PF00749%3B match to protein family HMM TIGR00464 gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0126 MMSYN1_0127 MMSYN1_0127 MMSYN1_0127 165521 166735 + HD domain protein identified by match to protein family HMM PF01966 gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0127 MMSYN1_0128 MMSYN1_0128 MMSYN1_0128 166761 167189 + conserved hypothetical protein gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0128 MMSYN1_0129 MMSYN1_0129 pyrG pyrG 167281 168879 + CTP synthase identified by match to protein family HMM PF00117%3B match to protein family HMM PF06418%3B match to protein family HMM TIGR00337 gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0129 MMSYN1_0130 MMSYN1_0130 MMSYN1_0130 169010 169984 + conserved hypothetical protein identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0130 MMSYN1_0131 MMSYN1_0131 fba fba 170143 171036 + fructose-1%2C6-bisphosphate aldolase%2C class II identified by match to protein family HMM PF01116%3B match to protein family HMM TIGR00167%3B match to protein family HMM TIGR01859 gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0131 MMSYN1_0132 MMSYN1_0132 MMSYN1_0132 171185 172246 + AAA family ATPase identified by match to protein family HMM PF00004%3B match to protein family HMM PF07728 gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0132 MMSYN1_0133 MMSYN1_0133 MMSYN1_0133 172239 174512 + conserved hypothetical protein gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0133 MMSYN1_0134 MMSYN1_0134 MMSYN1_0134 174619 176106 - putative membrane protein gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0134 MMSYN1_0135 MMSYN1_0135 MMSYN1_0135 176449 176562 - hypothetical protein identified by glimmer%3B putative gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0135 MMSYN1_0136 MMSYN1_0136 MMSYN1_0136 176702 177406 + glycerophosphodiester phosphodiesterase identified by match to protein family HMM PF03009 gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0136 MMSYN1_0137 MMSYN1_0137 rpmE rpmE 177566 177844 + ribosomal protein L31 identified by match to protein family HMM PF01197%3B match to protein family HMM TIGR00105 gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0137 MMSYN1_0138 MMSYN1_0138 MMSYN1_0138 177917 179815 + conserved hypothetical protein gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0138 MMSYN1_0139 MMSYN1_0139 MMSYN1_0139 179825 180775 + DHH family protein identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272 gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0139 MMSYN1_0140 MMSYN1_0140 tdk tdk 180777 181406 + thymidine kinase identified by match to protein family HMM PF00265 gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0140 MMSYN1_0141 MMSYN1_0141 prfA prfA 181409 182503 + peptide chain release factor 1 identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00019 gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0141 MMSYN1_0142 MMSYN1_0142 prmC prmC 182496 183344 + protein-(glutamine-N5) methyltransferase%2C release factor-specific identified by match to protein family HMM PF05175%3B match to protein family HMM TIGR00536%3B match to protein family HMM TIGR03534 gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0142 MMSYN1_0143 MMSYN1_0143 MMSYN1_0143 183353 184825 + putative membrane protein gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0143 MMSYN1_0144 MMSYN1_0144 MMSYN1_0144 184834 185334 + conserved hypothetical protein gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0144 MMSYN1_0145 MMSYN1_0145 MMSYN1_0145 185449 186363 + conserved hypothetical protein gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0145 MMSYN1_0146 MMSYN1_0146 MMSYN1_0146 186592 187299 + conserved hypothetical protein gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0146 MMSYN1_0147 MMSYN1_0147 MMSYN1_0147 187299 188828 + cardiolipin synthetase identified by match to protein family HMM PF00614 gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0147 MMSYN1_0148 MMSYN1_0148 rpsL rpsL 188952 189371 + ribosomal protein S12 identified by match to protein family HMM PF00164%3B match to protein family HMM TIGR00981 gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0148 MMSYN1_0149 MMSYN1_0149 rpsG rpsG 189458 189925 + ribosomal protein S7 identified by match to protein family HMM PF00177%3B match to protein family HMM TIGR01029 gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0149 MMSYN1_0150 MMSYN1_0150 fusA fusA 189950 192019 + translation elongation factor G identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00484 gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0150 MMSYN1_0151 MMSYN1_0151 tuf tuf 192151 193338 + translation elongation factor Tu identified by match to protein family HMM PF00009%3B match to protein family HMM PF03143%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00485 gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0151 MMSYN1_0152 MMSYN1_0152 MMSYN1_0152 193471 195336 + PTS system glucose-specific eiic ba component identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378 gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0152 MMSYN1_0153 MMSYN1_0153 MMSYN1_0153 195320 197590 + glycosyl hydrolase%2C family 31 identified by match to protein family HMM PF01055 gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0153 MMSYN1_0154 MMSYN1_0154 lap lap 197743 199098 + leucyl aminopeptidase identified by match to protein family HMM PF00883 gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0154 MMSYN1_0155 MMSYN1_0155 MMSYN1_0155 200904 201506 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0155 MMSYN1_0156 MMSYN1_0156 trmB trmB 201664 202329 - tRNA (guanine-N(7)-)-methyltransferase identified by match to protein family HMM PF02390%3B match to protein family HMM TIGR00091 gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0156 MMSYN1_0157 MMSYN1_0157 mgtE mgtE 202331 203734 - magnesium transporter identified by match to protein family HMM PF00571%3B match to protein family HMM PF03448%3B match to protein family HMM TIGR00400 gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0157 MMSYN1_0158 MMSYN1_0158 ssrA ssrA 203879 204289 + tmRNA gene162 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0158 MMSYN1_0159 MMSYN1_0159 MMSYN1_0159 204414 206543 + putative liporotein gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0159 MMSYN1_0160 MMSYN1_0160 abiGIA abiGIA 206563 207315 - abortive infection protein AbiGII identified by match to protein family HMM PF08843 gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0160 MMSYN1_0161 MMSYN1_0161 abiGIB abiGIB 207402 207998 - abortive infection protein AbiGI gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0161 MMSYN1_0162 MMSYN1_0162 MMSYN1_0162 208209 209415 - putative lipoprotein%2C authentic frameshift%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 pseudogene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0162 MMSYN1_0163 MMSYN1_0163 alaS alaS 209529 212219 - alanine--tRNA ligase identified by match to protein family HMM PF01411%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00344 gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0163 MMSYN1_0164 MMSYN1_0164 MMSYN1_0164 212293 212787 - conserved hypothetical protein gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0164 MMSYN1_0165 MMSYN1_0165 MMSYN1_0165 213005 214249 + oligopeptide ABC transporter%2C permease component identified by match to protein family HMM PF00528 gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0165 MMSYN1_0166 MMSYN1_0166 MMSYN1_0166 214265 215275 + oligopeptide ABC transporter%2C permease component I identified by match to protein family HMM PF00528 gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0166 MMSYN1_0167 MMSYN1_0167 MMSYN1_0167 215289 216989 + oligopeptide ABC transporter%2C ATP-binding component identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727 gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0167 MMSYN1_0168 MMSYN1_0168 MMSYN1_0168 216991 218859 + ABC transporter%2C ATP-binding protein%2C putative identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352 gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0168 MMSYN1_0169 MMSYN1_0169 MMSYN1_0169 218876 221977 + putative liporotein gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0169 MMSYN1_0170 MMSYN1_0170 MMSYN1_0170 222395 223690 - ATPase identified by match to protein family HMM PF01637 gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0170 MMSYN1_0171 MMSYN1_0171 MMSYN1_0171 223785 225089 - ATPase gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0171 MMSYN1_0172 MMSYN1_0172 MMSYN1_0172 225321 226202 + conserved hypothetical protein identified by match to protein family HMM PF00702%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484 gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0172 MMSYN1_0173 MMSYN1_0173 MMSYN1_0173 226236 227933 - mycoides cluster lipoprotein%2C LppA/P72 family identified by match to protein family HMM TIGR03490 gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0173 MMSYN1_0174 MMSYN1_0174 MMSYN1_0174 228150 228296 + conserved hypothetical protein gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0174 MMSYN1_0175 MMSYN1_0175 MMSYN1_0175 228333 230015 - mycoides cluster lipoprotein%2C LppA/P72 family identified by match to protein family HMM TIGR03490 gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0175 MMSYN1_0176 MMSYN1_0176 pgmB pgmB 230125 230754 - beta-phosphoglucomutase identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01990%3B match to protein family HMM TIGR02009 gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0176 MMSYN1_0177 MMSYN1_0177 MMSYN1_0177 230754 232553 - neopullulanase identified by match to protein family HMM PF00128%3B match to protein family HMM PF02903 gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0177 MMSYN1_0178 MMSYN1_0178 MMSYN1_0178 232672 234468 - neopullulanase identified by match to protein family HMM PF00128%3B match to protein family HMM PF02903 gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0178 MMSYN1_0179 MMSYN1_0179 MMSYN1_0179 234726 236525 + putative liporotein gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0179 MMSYN1_0180 MMSYN1_0180 MMSYN1_0180 236820 238610 + putative liporotein gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0180 MMSYN1_0181 MMSYN1_0181 MMSYN1_0181 238692 239183 + hypothetical protein identified by glimmer%3B putative gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0181 MMSYN1_0182 MMSYN1_0182 MMSYN1_0182 239198 241615 + maltosaccharide ABC transporter%2C permease%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00528 pseudogene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0182 MMSYN1_0183 MMSYN1_0183 MMSYN1_0183 241630 244170 + maltose ABC transporter permease protein identified by match to protein family HMM PF00528 gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0183 MMSYN1_0184 MMSYN1_0184 MMSYN1_0184 244172 245257 + multiple sugar-binding transport ATP-binding protein MsmK identified by match to protein family HMM PF00005 gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0184 MMSYN1_0185 MMSYN1_0185 MMSYN1_0185 245365 247662 + glycosyl hydrolase%2C family 65 identified by match to protein family HMM PF03632%3B match to protein family HMM PF03633%3B match to protein family HMM PF03636 gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0185 MMSYN1_0186 MMSYN1_0186 MMSYN1_0186 247664 249268 + trehalose-6-phosphate hydrolase (Alpha%2Calpha-phosphotrehalase) identified by match to protein family HMM PF00128 gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0186 MMSYN1_0187 MMSYN1_0187 MMSYN1_0187 249291 250010 + transcriptional regulator%2C GntR family identified by match to protein family HMM PF00392 gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0187 MMSYN1_0188 MMSYN1_0188 pepF pepF 250039 251832 - oligoendopeptidase F identified by match to protein family HMM PF01432%3B match to protein family HMM PF08439%3B match to protein family HMM TIGR00181 gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0188 MMSYN1_0189 MMSYN1_0189 MMSYN1_0189 251832 252515 - conserved hypothetical protein gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0189 MMSYN1_0190 MMSYN1_0190 MMSYN1_0190 252531 253886 - leucyl aminopeptidase identified by match to protein family HMM PF00883 gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0190 MMSYN1_0191 MMSYN1_0191 MMSYN1_0191 253998 254180 - ATPase gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0191 MMSYN1_0192 MMSYN1_0192 MMSYN1_0192 254459 255079 + chromate ion transporter identified by match to protein family HMM PF02417%3B overlaps another CDS with the same product name gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0192 MMSYN1_0193 MMSYN1_0193 MMSYN1_0193 255079 255756 + chromate ion transporter overlaps another CDS with the same product name gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0193 MMSYN1_0194 MMSYN1_0194 MMSYN1_0194 255890 256849 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF07751 pseudogene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0194 MMSYN1_0195 MMSYN1_0195 MMSYN1_0195 257213 260323 - ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0195 MMSYN1_0196 MMSYN1_0196 MMSYN1_0196 260308 261300 - spermidine/putrescine ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0196 MMSYN1_0197 MMSYN1_0197 MMSYN1_0197 261300 262355 - spermidine/putrescine import ATP-binding protein PotA identified by match to protein family HMM PF00005%3B match to protein family HMM PF08402 gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0197 MMSYN1_0198 MMSYN1_0198 rplT rplT 262729 263088 - ribosomal protein L20 identified by match to protein family HMM PF00453%3B match to protein family HMM TIGR01032 gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0198 MMSYN1_0199 MMSYN1_0199 rpmI rpmI 263107 263298 - ribosomal protein L35 identified by match to protein family HMM PF01632%3B match to protein family HMM TIGR00001 gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0199 MMSYN1_0200 MMSYN1_0200 infC infC 263324 263869 - translation initiation factor IF-3 identified by match to protein family HMM PF00707%3B match to protein family HMM PF05198%3B match to protein family HMM TIGR00168 gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0200 MMSYN1_0201 MMSYN1_0201 def def 264058 264660 - peptide deformylase identified by match to protein family HMM PF01327%3B match to protein family HMM TIGR00079 gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0201 MMSYN1_0202 MMSYN1_0202 MMSYN1_0202 264734 265291 + methyltransferase identified by match to protein family HMM PF03602 gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0202 MMSYN1_0203 MMSYN1_0203 gmk gmk 265294 266187 + guanylate kinase (GMP kinase) identified by match to protein family HMM PF00625%3B match to protein family HMM TIGR03263 gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0203 MMSYN1_0204 MMSYN1_0204 sun sun 266177 267436 + ribosomal RNA small subunit methyltransferase B identified by match to protein family HMM PF01029%3B match to protein family HMM PF01189%3B match to protein family HMM TIGR00563 gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0204 MMSYN1_0205 MMSYN1_0205 typA typA 267440 269269 - GTP-binding protein TypA/BipA identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01394 gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0205 MMSYN1_0206 MMSYN1_0206 MMSYN1_0206 269514 270271 + putative lipoprotein%2C authentic frameshift%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0206 MMSYN1_0207 MMSYN1_0207 MMSYN1_0207 270334 271125 + putative liporotein identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0207 MMSYN1_0208 MMSYN1_0208 MMSYN1_0208 271254 272045 + putative liporotein identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0208 MMSYN1_0209 MMSYN1_0209 murQ murQ 272099 273016 - N-acetylmuramic acid 6-phosphate etherase identified by match to protein family HMM TIGR00274 gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0209 MMSYN1_0210 MMSYN1_0210 MMSYN1_0210 273009 274706 - PTS system N-acetylmuramic acid-specific eiibc component (eiibc-murnac) identified by match to protein family HMM PF02378 gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0210 MMSYN1_0211 MMSYN1_0211 MMSYN1_0211 274828 275661 - transcription regulator GntR identified by match to protein family HMM PF01380%3B match to protein family HMM PF01418 gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0211 MMSYN1_0212 MMSYN1_0212 MMSYN1_0212 275665 275868 - conserved hypothetical protein gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0212 MMSYN1_0213 MMSYN1_0213 eno eno 276076 277431 + phosphopyruvate hydratase identified by match to protein family HMM PF00113%3B match to protein family HMM PF03952%3B match to protein family HMM TIGR01060 gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0213 MMSYN1_0214 MMSYN1_0214 MMSYN1_0214 277498 278319 + PAP2 superfamily domain membrane protein identified by match to protein family HMM PF01569 gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0214 MMSYN1_0215 MMSYN1_0215 MMSYN1_0215 278321 278752 + conserved hypothetical protein identified by match to protein family HMM PF03652%3B match to protein family HMM TIGR00250 gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0215 MMSYN1_0216 MMSYN1_0216 hpt_1 hpt_1 278758 279330 + hypoxanthine phosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01203 gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0216 MMSYN1_0217 MMSYN1_0217 MMSYN1_0217 279390 280163 - glycerol uptake facilitator protein identified by match to protein family HMM PF00230 gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0217 MMSYN1_0218 MMSYN1_0218 glpK glpK 280204 281721 - glycerol kinase identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782%3B match to protein family HMM TIGR01311 gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0218 MMSYN1_0219 MMSYN1_0219 glpO glpO 281738 282901 - glycerol oxydase identified by match to protein family HMM PF01266 gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0219 MMSYN1_0220 MMSYN1_0220 pfkA pfkA 283236 284216 + 6-phosphofructokinase identified by match to protein family HMM PF00365%3B match to protein family HMM TIGR02482 gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0220 MMSYN1_0221 MMSYN1_0221 pyk pyk 284287 285723 + pyruvate kinase identified by match to protein family HMM PF00224%3B match to protein family HMM TIGR01064 gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0221 MMSYN1_0222 MMSYN1_0222 thrS thrS 285988 287907 + threonine--tRNA ligase identified by match to protein family HMM PF00587%3B match to protein family HMM PF02824%3B match to protein family HMM PF03129%3B match to protein family HMM TIGR00418 gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0222 MMSYN1_0223 MMSYN1_0223 MMSYN1_0223 288390 289754 + NADH oxidase (noxase) identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992 gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0223 MMSYN1_0224 MMSYN1_0224 MMSYN1_0224 289757 290761 + probable lipoate-protein ligase A (Lipoate--proteinligase) identified by match to protein family HMM PF03099%3B match to protein family HMM TIGR00545 gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0224 MMSYN1_0225 MMSYN1_0225 pdhA pdhA 290805 291917 + pyruvate dehydrogenase (acetyl-transferring) E1 component%2C alpha subunit identified by match to protein family HMM PF00676%3B match to protein family HMM TIGR03181 gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0225 MMSYN1_0226 MMSYN1_0226 pdhB pdhB 291917 292906 + pyruvate dehydrogenase E1 component subunit beta (Scomplex%2C 36 kDa subunit) identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780 gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0226 MMSYN1_0227 MMSYN1_0227 pdhC pdhC 292935 294260 + dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex identified by match to protein family HMM PF00198%3B match to protein family HMM PF00364%3B match to protein family HMM PF02817 gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0227 MMSYN1_0228 MMSYN1_0228 lpdA lpdA 294279 296168 + dihydrolipoyl dehydrogenase identified by match to protein family HMM PF00070%3B match to protein family HMM PF00364%3B match to protein family HMM PF01134%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01350 gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0228 MMSYN1_0229 MMSYN1_0229 pta pta 296190 297158 + phosphate acetyltransferase identified by match to protein family HMM PF01515%3B match to protein family HMM TIGR00651 gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0229 MMSYN1_0230 MMSYN1_0230 ackA ackA 297171 298352 + acetate kinase identified by match to protein family HMM PF00871%3B match to protein family HMM TIGR00016 gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0230 MMSYN1_0231 MMSYN1_0231 MMSYN1_0231 298421 300376 + putative liporotein identified by match to protein family HMM PF01732 gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0231 MMSYN1_0232 MMSYN1_0232 coaD coaD 300386 300808 + pantetheine-phosphate adenylyltransferase identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR01510 gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0232 MMSYN1_0233 MMSYN1_0233 ptsP ptsP 300902 302623 + phosphoenolpyruvate-protein phosphotransferase identified by match to protein family HMM PF00391%3B match to protein family HMM PF02896%3B match to protein family HMM PF05524%3B match to protein family HMM TIGR01417 gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0233 MMSYN1_0234 MMSYN1_0234 MMSYN1_0234 302705 303169 + PTS system glucose-specific eiicba component (eiicba-glc) (eii-glc/eiii-glc) identified by match to protein family HMM PF00358%3B match to protein family HMM TIGR00830 gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0234 MMSYN1_0235 MMSYN1_0235 MMSYN1_0235 303170 303460 + conserved hypothetical protein gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0235 MMSYN1_0236 MMSYN1_0236 dhaL dhaL 303533 304159 + dihydroxyacetone kinase%2C L subunit identified by match to protein family HMM PF02734%3B match to protein family HMM TIGR02365 gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0236 MMSYN1_0237 MMSYN1_0237 MMSYN1_0237 304167 304562 + dihydroxyacetone kinase%2C phosphotransfer subunit identified by match to protein family HMM PF03610%3B match to protein family HMM TIGR02364 gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0237 MMSYN1_0238 MMSYN1_0238 rpsD rpsD 304607 305233 - ribosomal protein S4 identified by match to protein family HMM PF00163%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR01017 gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0238 MMSYN1_0239 MMSYN1_0239 MMSYN1_0239 305488 307275 + conserved hypothetical protein gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0239 MMSYN1_0240 MMSYN1_0240 thiI thiI 307283 308470 + thiamine biosynthesis/tRNA modification protein ThiI identified by match to protein family HMM PF02568%3B match to protein family HMM PF02926%3B match to protein family HMM PF06508%3B match to protein family HMM TIGR00342 gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0240 MMSYN1_0241 MMSYN1_0241 ctpA ctpA 308601 311333 + carboxyl terminal peptidase activity of this gene was confirmed by Mary Brown and Ayman Alam at the University of Florida%3B disrupted by insertion sequence acquired from Escherichia coli during a BAC cloning step in the genome synthesis process%3B carboxyl terminal peptidase A%3B this gene model represents a disrupted reading frame with multiple genetic anomalies%3B identified by match to protein family HMM PF03572 pseudogene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0241 MMSYN1_0242 MMSYN1_0242 MMSYN1_0242 311451 313136 + conserved hypothetical protein gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0242 MMSYN1_0243 MMSYN1_0243 MMSYN1_0243 313147 315438 + putative liporotein identified by match to protein family HMM PF03382 gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0243 MMSYN1_0244 MMSYN1_0244 MMSYN1_0244 315501 317768 + putative liporotein gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0244 MMSYN1_0245 MMSYN1_0245 MMSYN1_0245 318242 320383 + putative membrane protein gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0245 MMSYN1_0246 MMSYN1_0246 MMSYN1_0246 320410 323316 - E1-E2 ATPase subfamily%2C putative identified by match to protein family HMM PF00122%3B match to protein family HMM PF00690%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494 gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0246 MMSYN1_0247 MMSYN1_0247 ysxC ysxC 323325 323915 - ribosome biogenesis GTP-binding protein YsxC identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR03598 gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0247 MMSYN1_0248 MMSYN1_0248 MMSYN1_0248 323909 324469 - conserved hypothetical protein gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0248 MMSYN1_0249 MMSYN1_0249 MMSYN1_0249 324471 325049 - conserved hypothetical protein gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0249 MMSYN1_0250 MMSYN1_0250 MMSYN1_0250 325052 325741 - conserved hypothetical protein gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0250 MMSYN1_0251 MMSYN1_0251 MMSYN1_0251 325823 326515 + conserved hypothetical protein gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0251 MMSYN1_0252 MMSYN1_0252 MMSYN1_0252 326516 327238 - oxidoreductase identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF08659 gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0252 MMSYN1_0253 MMSYN1_0253 MMSYN1_0253 327283 327756 - transcription elongation factor GreA identified by match to protein family HMM PF01272%3B match to protein family HMM PF03449%3B match to protein family HMM TIGR01462 gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0253 MMSYN1_0254 MMSYN1_0254 uvrC uvrC 327879 329633 - excinuclease ABC subunit C identified by match to protein family HMM PF01541%3B match to protein family HMM PF02151%3B match to protein family HMM PF08459%3B match to protein family HMM TIGR00194 gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0254 MMSYN1_0255 MMSYN1_0255 MMSYN1_0255 329643 330704 - conserved hypothetical protein gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0255 MMSYN1_0256 MMSYN1_0256 MMSYN1_0256 330770 332392 - Amino acid permease superfamily protein identified by match to protein family HMM PF00324 gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0256 MMSYN1_0257 MMSYN1_0257 MMSYN1_0257 332498 334249 - hydrolase identified by match to protein family HMM PF00753 gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0257 MMSYN1_0258 MMSYN1_0258 MMSYN1_0258 334375 335094 - oxidoreductase identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370 gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0258 MMSYN1_0259 MMSYN1_0259 MMSYN1_0259 335106 335903 - NAD(+)/nadh kinase%2C putative identified by match to protein family HMM PF01513 gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0259 MMSYN1_0260 MMSYN1_0260 valS valS 336014 338632 - valine--tRNA ligase identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00422 gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0260 MMSYN1_0261 MMSYN1_0261 thiN thiN 338719 339345 - contains an 85 bp insertion that occured during the genome synthethis process%3B this gene model represents a disrupted reading frame with multiple genetic anomalies%3B identified by match to protein family HMM PF04263%3B match to protein family HMM TIGR01378 pseudogene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0261 MMSYN1_0262 MMSYN1_0262 rpe rpe 339335 340097 - gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0262 MMSYN1_0263 MMSYN1_0263 rsgA rsgA 340099 341001 - ribosome small subunit-dependent GTPase A identified by match to protein family HMM PF03193%3B match to protein family HMM TIGR00157 gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0263 MMSYN1_0264 MMSYN1_0264 MMSYN1_0264 341011 342126 - serine/threonine protein kinase identified by match to protein family HMM PF00069 gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0264 MMSYN1_0265 MMSYN1_0265 tnpA_6 tnpA_6 1001769 1002311 - IS1296 transposase protein A gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0265 MMSYN1_0267 MMSYN1_0267 tnpB_6 tnpB_6 1000900 1001631 - IS1296 transposase protein B identified by match to protein family HMM PF00665 gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0267 MMSYN1_0268 MMSYN1_0268 MMSYN1_0268 342126 342883 - serine/threonine phosphatase%2C degenerate%3B this region contains one or more premature stops and/or frameshifts pseudogene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0268 MMSYN1_0269 MMSYN1_0269 MMSYN1_0269 342912 344321 - conserved hypothetical protein gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0269 MMSYN1_0270 MMSYN1_0270 MMSYN1_0270 344441 344857 + ATPase%2C YjeE family identified by match to protein family HMM PF02367%3B match to protein family HMM TIGR00150 gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0270 MMSYN1_0271 MMSYN1_0271 MMSYN1_0271 344859 345422 + glycoprotease family protein identified by match to protein family HMM PF00814%3B match to protein family HMM TIGR03725 gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0271 MMSYN1_0272 MMSYN1_0272 MMSYN1_0272 345458 350779 - efflux ABC transporter%2C permease protein identified by match to protein family HMM PF02687 gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0272 MMSYN1_0273 MMSYN1_0273 MMSYN1_0273 350992 354132 + hypothetical protein identified by glimmer%3B putative gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0273 MMSYN1_0274 MMSYN1_0274 MMSYN1_0274 354147 354761 + putative liporotein gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0274 MMSYN1_0275 MMSYN1_0275 MMSYN1_0275 354901 355422 + putative liporotein gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0275 MMSYN1_0276 MMSYN1_0276 MMSYN1_0276 355682 356302 + putative liporotein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0276 MMSYN1_0277 MMSYN1_0277 MMSYN1_0277 356463 356975 + putative liporotein gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0277 MMSYN1_0278 MMSYN1_0278 MMSYN1_0278 357015 359429 - PTS system fructose-specific enzyme iiabc component identified by match to protein family HMM PF00359%3B match to protein family HMM PF02378%3B match to protein family HMM PF02379%3B match to protein family HMM TIGR00829%3B match to protein family HMM TIGR00848%3B match to protein family HMM TIGR01427 gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0278 MMSYN1_0279 MMSYN1_0279 MMSYN1_0279 359688 359975 + conserved hypothetical protein gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0279 MMSYN1_0280 MMSYN1_0280 MMSYN1_0280 360219 360308 + tRNA-Ser tRNA gene281 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0280 MMSYN1_0281 MMSYN1_0281 MMSYN1_0281 360428 361108 + conserved hypothetical protein gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0281 MMSYN1_0282 MMSYN1_0282 proS proS 361089 362513 + proline--tRNA ligase identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM PF09180%3B match to protein family HMM TIGR00408 gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0282 MMSYN1_0283 MMSYN1_0283 rnhA rnhA 362526 363143 + ribonuclease HI identified by match to protein family HMM PF00075 gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0283 MMSYN1_0284 MMSYN1_0284 MMSYN1_0284 363145 364032 + conserved hypothetical protein gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0284 MMSYN1_0285 MMSYN1_0285 lepA lepA 364056 365858 + GTP-binding protein LepA identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF06421%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01393 gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0285 MMSYN1_0286 MMSYN1_0286 MMSYN1_0286 365884 366690 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0286 MMSYN1_0287 MMSYN1_0287 aspS aspS 366707 368431 - aspartate--tRNA ligase identified by match to protein family HMM PF00152%3B match to protein family HMM PF00587%3B match to protein family HMM PF01336%3B match to protein family HMM PF02938%3B match to protein family HMM TIGR00459 gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0287 MMSYN1_0288 MMSYN1_0288 hisS hisS 368440 369684 - histidine--tRNA ligase identified by match to protein family HMM PF00587%3B match to protein family HMM TIGR00442 gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0288 MMSYN1_0289 MMSYN1_0289 rbfA rbfA 369869 370222 + ribosome-binding factor A identified by match to protein family HMM PF02033%3B match to protein family HMM TIGR00082 gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0289 MMSYN1_0290 MMSYN1_0290 truB truB 370272 371150 + tRNA pseudouridine synthase B identified by match to protein family HMM PF01509%3B match to protein family HMM TIGR00431 gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0290 MMSYN1_0291 MMSYN1_0291 MMSYN1_0291 371137 371691 + riboflavin kinase (Flavokinase) identified by match to protein family HMM PF01467%3B match to protein family HMM PF06574 gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0291 MMSYN1_0292 MMSYN1_0292 MMSYN1_0292 371714 373759 - peptidase%2C S41 family identified by match to protein family HMM PF03572 gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0292 MMSYN1_0293 MMSYN1_0293 MMSYN1_0293 373784 375754 - putative liporotein identified by match to protein family HMM PF03572 gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0293 MMSYN1_0294 MMSYN1_0294 rpsO rpsO 375967 376233 + ribosomal protein S15 identified by match to protein family HMM PF00312%3B match to protein family HMM TIGR00952 gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0294 MMSYN1_0295 MMSYN1_0295 MMSYN1_0295 376293 376366 + tRNA-Gly tRNA gene296 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0295 MMSYN1_0296 MMSYN1_0296 MMSYN1_0296 376464 377108 + conserved hypothetical protein gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0296 MMSYN1_0297 MMSYN1_0297 infB infB 377127 378989 - translation initiation factor IF-2 identified by match to protein family HMM PF00009%3B match to protein family HMM PF01926%3B match to protein family HMM PF03144%3B match to protein family HMM PF04760%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00487 gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0297 MMSYN1_0298 MMSYN1_0298 MMSYN1_0298 379011 379310 - ribosomal protein L7A family identified by match to protein family HMM PF01248 gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0298 MMSYN1_0299 MMSYN1_0299 MMSYN1_0299 379297 379578 - conserved hypothetical protein identified by match to protein family HMM PF04296 gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0299 MMSYN1_0300 MMSYN1_0300 nusA nusA 379559 381313 - transcription elongation factor NusA identified by match to protein family HMM PF08529%3B match to protein family HMM TIGR01953 gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0300 MMSYN1_0301 MMSYN1_0301 MMSYN1_0301 381322 381816 - conserved hypothetical protein gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0301 MMSYN1_0302 MMSYN1_0302 MMSYN1_0302 381929 382579 - nitroreductase family protein identified by match to protein family HMM PF00881 gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0302 MMSYN1_0303 MMSYN1_0303 polC polC 382592 387040 - DNA polymerase III%2C alpha subunit%2C Gram-positive type identified by match to protein family HMM PF00929%3B match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00573%3B match to protein family HMM TIGR01405 gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0303 MMSYN1_0304 MMSYN1_0304 cdsA cdsA 387049 388077 - phosphatidate cytidylyltransferase identified by match to protein family HMM PF01148 gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0304 MMSYN1_0305 MMSYN1_0305 MMSYN1_0305 388276 389352 - peptidase%2C M24 family identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321 gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0305 MMSYN1_0306 MMSYN1_0306 MMSYN1_0306 389506 390282 - hypothetical protein identified by glimmer%3B putative gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0306 MMSYN1_0307 MMSYN1_0307 MMSYN1_0307 390558 390911 + integrase core domain protein gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0307 MMSYN1_0308 MMSYN1_0308 trpS trpS 391003 392013 + tryptophan--tRNA ligase identified by match to protein family HMM PF00579%3B match to protein family HMM TIGR00233 gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0308 MMSYN1_0309 MMSYN1_0309 MMSYN1_0309 392042 392911 - conserved hypothetical protein gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0309 MMSYN1_0310 MMSYN1_0310 MMSYN1_0310 393024 393824 + conserved hypothetical protein gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0310 MMSYN1_0311 MMSYN1_0311 MMSYN1_0311 393879 394955 - RmuC domain protein identified by match to protein family HMM PF02646 gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0311 MMSYN1_0312 MMSYN1_0312 MMSYN1_0312 395171 397891 + conserved hypothetical protein gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0312 MMSYN1_0313 MMSYN1_0313 trmFO2 trmFO2 398248 399522 + methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO 2 identified by match to protein family HMM PF01134 gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0313 MMSYN1_0314 MMSYN1_0314 MMSYN1_0314 399627 400361 + putative membrane protein gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0314 MMSYN1_0315 MMSYN1_0315 MMSYN1_0315 400483 400635 + conserved hypothetical protein gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0315 MMSYN1_0316 MMSYN1_0316 tkt tkt 400694 402664 + transketolase identified by match to protein family HMM PF00456%3B match to protein family HMM PF02779%3B match to protein family HMM PF02780%3B match to protein family HMM TIGR00232 gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0316 MMSYN1_0317 MMSYN1_0317 MMSYN1_0317 402680 402925 + conserved hypothetical protein identified by match to protein family HMM PF03672 gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0317 MMSYN1_0318 MMSYN1_0318 MMSYN1_0318 402993 404537 + conserved hypothetical protein gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0318 MMSYN1_0319 MMSYN1_0319 MMSYN1_0319 404627 407524 + putative liporotein gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0319 MMSYN1_0320 MMSYN1_0320 MMSYN1_0320 407532 408329 + triacylglycerol lipase identified by match to protein family HMM PF00561 gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0320 MMSYN1_0321 MMSYN1_0321 MMSYN1_0321 408482 408910 + putative liporotein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0321 MMSYN1_0322 MMSYN1_0322 MMSYN1_0322 409235 410692 + divergent AAA domain family identified by match to protein family HMM PF04326 gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0322 MMSYN1_0323 MMSYN1_0323 MMSYN1_0323 410710 412203 - putative liporotein gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0323 MMSYN1_0324 MMSYN1_0324 MMSYN1_0324 412372 412896 - conserved hypothetical protein identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0324 MMSYN1_0325 MMSYN1_0325 MMSYN1_0325 414261 415751 + putative membrane protein gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0325 MMSYN1_0326 MMSYN1_0326 MMSYN1_0326 415769 416530 + conserved hypothetical protein gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0326 MMSYN1_0327 MMSYN1_0327 scpA scpA 416540 417376 + ScpA protein identified by match to protein family HMM PF02616 gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0327 MMSYN1_0328 MMSYN1_0328 scpB scpB 417360 417989 + segregation and condensation protein B identified by match to protein family HMM PF04079%3B match to protein family HMM TIGR00281 gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0328 MMSYN1_0329 MMSYN1_0329 MMSYN1_0329 418057 418815 + ribosomal large subunit pseudouridine synthase B (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093 gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0329 MMSYN1_0330 MMSYN1_0330 MMSYN1_0330 418825 419442 + deoxyguanosine kinase identified by match to protein family HMM PF01712 gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0330 MMSYN1_0331 MMSYN1_0331 MMSYN1_0331 419454 420167 + conserved hypothetical protein identified by match to protein family HMM PF01709 gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0331 MMSYN1_0332 MMSYN1_0332 MMSYN1_0332 420267 421094 + conserved hypothetical protein gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0332 MMSYN1_0333 MMSYN1_0333 vlcA vlcA 421586 422005 + lipoprotein%2C putative (VlcA) gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0333 MMSYN1_0334 MMSYN1_0334 vlcB vlcB 422445 422924 + lipoprotein%2C putative (VlcB) gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0334 MMSYN1_0335 MMSYN1_0335 vlcC vlcC 423315 423773 + lipoprotein%2C putative (VlcC) gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0335 MMSYN1_0336 MMSYN1_0336 MMSYN1_0336 423939 424388 + PTS system%2C IIA component identified by match to protein family HMM PF00359 gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0336 MMSYN1_0337 MMSYN1_0337 MMSYN1_0337 424400 426208 + PTS system ascorbate-specific enzyme IIC/IIB identified by match to protein family HMM PF02302%3B match to protein family HMM PF04215 gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0337 MMSYN1_0338 MMSYN1_0338 MMSYN1_0338 426379 427098 + putative liporotein gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0338 MMSYN1_0339 MMSYN1_0339 MMSYN1_0339 427501 429321 + Na+ ABC transporter%2C ATP-binding component identified by match to protein family HMM PF00005 gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0339 MMSYN1_0340 MMSYN1_0340 MMSYN1_0340 429337 431127 + ABC transporter%2C permease protein %2C putative gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0340 MMSYN1_0341 MMSYN1_0341 MMSYN1_0341 431156 432556 + viral A-type inclusion protein%2C putative gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0341 MMSYN1_0342 MMSYN1_0342 MMSYN1_0342 432682 434868 + putative liporotein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0342 MMSYN1_0343 MMSYN1_0343 MMSYN1_0343 435005 435700 + conserved hypothetical protein gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0343 MMSYN1_0344 MMSYN1_0344 ppa ppa 435756 436316 - inorganic diphosphatase identified by match to protein family HMM PF00719 gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0344 MMSYN1_0345 MMSYN1_0345 MMSYN1_0345 436455 437345 + conserved hypothetical protein gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0345 MMSYN1_0346 MMSYN1_0346 MMSYN1_0346 437411 438106 + conserved hypothetical protein gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0346 MMSYN1_0347 MMSYN1_0347 cmk cmk 438115 438777 + cytidylate kinase identified by match to protein family HMM PF02224%3B match to protein family HMM TIGR00017 gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0347 MMSYN1_0348 MMSYN1_0348 engA engA 438784 440091 + ribosome-associated GTPase EngA identified by match to protein family HMM PF00071%3B match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR03594 gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0348 MMSYN1_0349 MMSYN1_0349 gpsA gpsA 440093 441082 + glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) identified by match to protein family HMM PF01210%3B match to protein family HMM PF07479 gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0349 MMSYN1_0350 MMSYN1_0350 hup hup 441114 441386 + DNA-binding protein HU identified by match to protein family HMM PF00216 gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0350 MMSYN1_0351 MMSYN1_0351 recU recU 441952 442461 - recombination protein U identified by match to protein family HMM PF03838 gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0351 MMSYN1_0352 MMSYN1_0352 MMSYN1_0352 441441 441989 + conserved hypothetical protein gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0352 MMSYN1_0353 MMSYN1_0353 MMSYN1_0353 442525 442902 + DivIVA domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM TIGR03544 pseudogene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0353 MMSYN1_0354 MMSYN1_0354 MMSYN1_0354 443061 444476 + putative lipoprotein%2C degenerate%3B this region contains one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 pseudogene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0354 MMSYN1_0355 MMSYN1_0355 MMSYN1_0355 444649 445872 + putative liporotein identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0355 MMSYN1_0356 MMSYN1_0356 rnpB rnpB 445958 446302 + Bacterial RNase P class B gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0356 MMSYN1_0357 MMSYN1_0357 MMSYN1_0357 446339 446809 + putative competence-damage inducible protein identified by match to protein family HMM PF02464%3B match to protein family HMM TIGR00199 gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0357 MMSYN1_0358 MMSYN1_0358 recA recA 446852 447889 + protein RecA identified by match to protein family HMM PF00154%3B match to protein family HMM TIGR02012 gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0358 MMSYN1_0359 MMSYN1_0359 MMSYN1_0359 448025 449554 + conserved hypothetical protein identified by match to protein family HMM PF00013%3B match to protein family HMM PF01966%3B match to protein family HMM PF08668%3B match to protein family HMM TIGR00277%3B match to protein family HMM TIGR03319 gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0359 MMSYN1_0360 MMSYN1_0360 ffh ffh 449588 450931 + signal recognition particle protein identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM PF02978%3B match to protein family HMM TIGR00959 gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0360 MMSYN1_0361 MMSYN1_0361 MMSYN1_0361 450935 451402 + conserved hypothetical protein identified by match to protein family HMM PF02590 gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0361 MMSYN1_0362 MMSYN1_0362 rpsP rpsP 451493 451771 + ribosomal protein S16 identified by match to protein family HMM PF00886%3B match to protein family HMM TIGR00002 gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0362 MMSYN1_0363 MMSYN1_0363 rimM rimM 451803 452297 + 16S rRNA processing protein RimM identified by match to protein family HMM PF01782%3B match to protein family HMM TIGR02273 gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0363 MMSYN1_0364 MMSYN1_0364 trmD trmD 452299 453021 + tRNA (guanine-N1)-methyltransferase identified by match to protein family HMM PF01746%3B match to protein family HMM TIGR00088 gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0364 MMSYN1_0365 MMSYN1_0365 rplS rplS 453023 453406 + ribosomal protein L19 identified by match to protein family HMM PF01245%3B match to protein family HMM TIGR01024 gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0365 MMSYN1_0366 MMSYN1_0366 ylqF ylqF 453505 454455 + ribosome biogenesis GTP-binding protein YlqF identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03596 gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0366 MMSYN1_0367 MMSYN1_0367 rnhB rnhB 454449 455072 + ribonuclease HII identified by match to protein family HMM PF01351 gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0367 MMSYN1_0368 MMSYN1_0368 MMSYN1_0368 455094 456890 - conserved hypothetical protein identified by match to protein family HMM PF00581%3B match to protein family HMM PF02852 gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0368 MMSYN1_0369 MMSYN1_0369 MMSYN1_0369 456893 458131 - YeeE/YedE family protein%2C putative identified by match to protein family HMM PF04143 gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0369 MMSYN1_0370 MMSYN1_0370 MMSYN1_0370 458292 458597 + single-strand binding family protein identified by match to protein family HMM PF00436 gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0370 MMSYN1_0371 MMSYN1_0371 MMSYN1_0371 458816 460687 + ABC transporter%2C permease and ATP-binding componen identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0371 MMSYN1_0372 MMSYN1_0372 MMSYN1_0372 460703 462556 + ABC transporter%2C permease and ATP-binding componen identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0372 MMSYN1_0373 MMSYN1_0373 MMSYN1_0373 462590 464197 + conserved hypothetical protein gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0373 MMSYN1_0374 MMSYN1_0374 MMSYN1_0374 464253 464329 + tRNA-Arg tRNA gene375 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0374 MMSYN1_0375 MMSYN1_0375 MMSYN1_0375 464383 465123 + conserved hypothetical protein gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0375 MMSYN1_0376 MMSYN1_0376 MMSYN1_0376 465125 465439 + conserved hypothetical protein gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0376 MMSYN1_0377 MMSYN1_0377 cgtA cgtA 465510 466811 + Obg family GTPase CgtA identified by match to protein family HMM PF01018%3B match to protein family HMM PF01926%3B match to protein family HMM PF09269%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR02729%3B match to protein family HMM TIGR03595 gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0377 MMSYN1_0378 MMSYN1_0378 nadE nadE 466813 467550 + NAD+ synthetase identified by match to protein family HMM PF02540%3B match to protein family HMM TIGR00552 gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0378 MMSYN1_0379 MMSYN1_0379 MMSYN1_0379 467567 467845 + conserved hypothetical protein gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0379 MMSYN1_0380 MMSYN1_0380 MMSYN1_0380 467863 468960 + putative nicotinate-nucleotide adenylyltransferase identified by match to protein family HMM PF01467%3B match to protein family HMM PF01966%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR00482%3B match to protein family HMM TIGR00488 gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0380 MMSYN1_0381 MMSYN1_0381 mtnN mtnN 468965 469624 + MTA/SAH nucleosidase identified by match to protein family HMM PF01048%3B match to protein family HMM TIGR01704 gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0381 MMSYN1_0382 MMSYN1_0382 MMSYN1_0382 469634 470272 + deoxynucleoside kinase gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0382 MMSYN1_0383 MMSYN1_0383 MMSYN1_0383 470394 471113 + putative liporotein gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0383 MMSYN1_0384 MMSYN1_0384 MMSYN1_0384 471190 471927 + putative liporotein gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0384 MMSYN1_0385 MMSYN1_0385 MMSYN1_0385 471937 472617 + putative liporotein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0385 MMSYN1_0386 MMSYN1_0386 MMSYN1_0386 472656 473501 + putative liporotein gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0386 MMSYN1_0387 MMSYN1_0387 trmU trmU 473609 474736 + tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase identified by match to protein family HMM PF03054%3B match to protein family HMM TIGR00420 gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0387 MMSYN1_0388 MMSYN1_0388 MMSYN1_0388 474783 475400 + conserved hypothetical protein gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0388 MMSYN1_0389 MMSYN1_0389 MMSYN1_0389 475476 477620 + conserved hypothetical protein gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0389 MMSYN1_0390 MMSYN1_0390 fmt fmt 477610 478563 + methionyl-tRNA formyltransferase identified by match to protein family HMM PF00551%3B match to protein family HMM PF02911%3B match to protein family HMM TIGR00460 gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0390 MMSYN1_0391 MMSYN1_0391 efp efp 478650 479204 + translation elongation factor P identified by match to protein family HMM PF01132%3B match to protein family HMM PF08207%3B match to protein family HMM PF09285%3B match to protein family HMM TIGR00038 gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0391 MMSYN1_0392 MMSYN1_0392 MMSYN1_0392 479222 479524 + conserved hypothetical protein gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0392 MMSYN1_0393 MMSYN1_0393 tig tig 479541 480827 + trigger factor identified by match to protein family HMM PF00254%3B match to protein family HMM PF05697%3B match to protein family HMM PF05698%3B match to protein family HMM TIGR00115 gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0393 MMSYN1_0394 MMSYN1_0394 lon lon 480950 483310 + ATP-dependent protease La identified by match to protein family HMM PF00004%3B match to protein family HMM PF05362%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00763 gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0394 MMSYN1_0395 MMSYN1_0395 rarA rarA 483409 484644 + recombination factor protein RarA identified by match to protein family HMM PF00004 gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0395 MMSYN1_0396 MMSYN1_0396 MMSYN1_0396 484673 486898 - putative liporotein gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0396 MMSYN1_0397 MMSYN1_0397 MMSYN1_0397 486949 489240 - putative liporotein gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0397 MMSYN1_0398 MMSYN1_0398 MMSYN1_0398 489280 491742 - putative liporotein gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0398 MMSYN1_0399 MMSYN1_0399 MMSYN1_0399 491892 497153 + efflux ABC transporter%2C permease protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02687 pseudogene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0399 MMSYN1_0400 MMSYN1_0400 MMSYN1_0400 497201 497752 + ThiJ/PfpI family protein identified by match to protein family HMM PF01965%3B match to protein family HMM TIGR01383 gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0400 MMSYN1_0401 MMSYN1_0401 MMSYN1_0401 497850 499634 + peptidase C39 family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF03412 pseudogene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0401 MMSYN1_0402 MMSYN1_0402 MMSYN1_0402 499639 500133 + putative metalloprotease identified by match to protein family HMM PF02130%3B match to protein family HMM TIGR00043 gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0402 MMSYN1_0403 MMSYN1_0403 era era 500137 501042 + GTP-binding protein Era identified by match to protein family HMM PF01926%3B match to protein family HMM PF07650%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00436 gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0403 MMSYN1_0404 MMSYN1_0404 recO recO 501042 501791 + DNA repair protein RecO identified by match to protein family HMM PF02565%3B match to protein family HMM TIGR00613 gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0404 MMSYN1_0405 MMSYN1_0405 glyS glyS 501855 503225 + glycine--tRNA ligase identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM TIGR00389 gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0405 MMSYN1_0406 MMSYN1_0406 dnaG dnaG 503260 505098 + DNA primase identified by match to protein family HMM PF01751%3B match to protein family HMM PF01807%3B match to protein family HMM PF08275%3B match to protein family HMM TIGR01391 gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0406 MMSYN1_0407 MMSYN1_0407 rpoD rpoD 505101 506621 + RNA polymerase sigma-A factor identified by match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM TIGR02937 gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0407 MMSYN1_0408 MMSYN1_0408 MMSYN1_0408 506621 507298 + conserved hypothetical protein identified by match to protein family HMM PF04816 gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0408 MMSYN1_0409 MMSYN1_0409 MMSYN1_0409 507285 508061 + NIF3 family protein identified by match to protein family HMM PF01784 gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0409 MMSYN1_0410 MMSYN1_0410 MMSYN1_0410 508070 509431 + superfamily II DNA and RNA helicase identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271 gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0410 MMSYN1_0411 MMSYN1_0411 MMSYN1_0411 509471 510985 + putative membrane protein identified by match to protein family HMM PF02588 gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0411 MMSYN1_0412 MMSYN1_0412 MMSYN1_0412 511101 515255 + putative membrane protein gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0412 MMSYN1_0413 MMSYN1_0413 apt apt 515267 515779 + adenine phosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01090 gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0413 MMSYN1_0414 MMSYN1_0414 MMSYN1_0414 515862 518126 + RelA/SpoT family protein identified by match to protein family HMM PF01842%3B match to protein family HMM PF01966%3B match to protein family HMM PF02824%3B match to protein family HMM PF04607%3B match to protein family HMM TIGR00691 gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0414 MMSYN1_0415 MMSYN1_0415 smc smc 518163 521129 - chromosome segregation protein SMC identified by match to protein family HMM PF02463%3B match to protein family HMM PF06470%3B match to protein family HMM TIGR02168 gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0415 MMSYN1_0416 MMSYN1_0416 MMSYN1_0416 521435 521824 - conserved hypothetical protein gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0416 MMSYN1_0417 MMSYN1_0417 MMSYN1_0417 521827 522282 - cdse gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0417 MMSYN1_0418 MMSYN1_0418 rnc rnc 522415 523113 - ribonuclease III identified by match to protein family HMM PF00035%3B match to protein family HMM PF00636%3B match to protein family HMM TIGR02191 gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0418 MMSYN1_0419 MMSYN1_0419 plsX plsX 523103 524107 - fatty acid/phospholipid synthesis protein PlsX identified by match to protein family HMM PF02504%3B match to protein family HMM TIGR00182 gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0419 MMSYN1_0420 MMSYN1_0420 MMSYN1_0420 524140 525783 - dihydroxyacetone kinase 2 domain protein identified by match to protein family HMM PF02734%3B match to protein family HMM TIGR03599 gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0420 MMSYN1_0421 MMSYN1_0421 MMSYN1_0421 525808 526119 - conserved hypothetical protein gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0421 MMSYN1_0422 MMSYN1_0422 rpmB rpmB 526288 526485 + ribosomal protein L28 identified by match to protein family HMM PF00830%3B match to protein family HMM TIGR00009 gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0422 MMSYN1_0423 MMSYN1_0423 MMSYN1_0423 526549 526633 + tRNA-Leu tRNA gene424 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0423 MMSYN1_0424 MMSYN1_0424 MMSYN1_0424 526716 527159 + conserved hypothetical protein gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0424 MMSYN1_0425 MMSYN1_0425 MMSYN1_0425 527248 528378 + phosphate ABC transporter%2C substrate-binding component gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0425 MMSYN1_0426 MMSYN1_0426 MMSYN1_0426 528430 530520 + phosphate ABC transport system%2C permease component identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR00974%3B match to protein family HMM TIGR02138 gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0426 MMSYN1_0427 MMSYN1_0427 pstB pstB 530513 531322 + phosphate ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00972 gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0427 MMSYN1_0428 MMSYN1_0428 phoU phoU 531331 532005 + phosphate transport system regulatory protein PhoU identified by match to protein family HMM PF01895%3B match to protein family HMM TIGR02135 gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0428 MMSYN1_0429 MMSYN1_0429 MMSYN1_0429 532072 533301 + peptidase%2C M41 family identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM TIGR00064 gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0429 MMSYN1_0430 MMSYN1_0430 MMSYN1_0430 533291 533626 + putative transcriptional regulator identified by match to protein family HMM PF04297%3B match to protein family HMM PF04967 gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0430 MMSYN1_0431 MMSYN1_0431 MMSYN1_0431 533614 534387 + conserved hypothetical protein identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00282 gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0431 MMSYN1_0432 MMSYN1_0432 metK metK 534597 535760 + methionine adenosyltransferase identified by match to protein family HMM PF00438%3B match to protein family HMM PF02772%3B match to protein family HMM PF02773%3B match to protein family HMM TIGR01034 gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0432 MMSYN1_0433 MMSYN1_0433 MMSYN1_0433 535751 536434 + copper homeostasis protein identified by match to protein family HMM PF03932 gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0433 MMSYN1_0434 MMSYN1_0434 trmFO trmFO 536427 537743 + tRNA:M(5)U-54 methyltransferase identified by match to protein family HMM PF01134%3B match to protein family HMM TIGR00137 gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0434 MMSYN1_0435 MMSYN1_0435 MMSYN1_0435 537769 538698 + phosphomannose isomerase type I identified by match to protein family HMM PF01238 gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0435 MMSYN1_0436 MMSYN1_0436 ung ung 538691 539344 + uracil-DNA glycosylase (UDG) identified by match to protein family HMM PF03167 gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0436 MMSYN1_0437 MMSYN1_0437 MMSYN1_0437 539417 540397 + cmp-binding-factor identified by match to protein family HMM PF01336%3B match to protein family HMM PF01966 gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0437 MMSYN1_0438 MMSYN1_0438 MMSYN1_0438 540428 540826 - protein hit identified by match to protein family HMM PF01230 gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0438 MMSYN1_0439 MMSYN1_0439 MMSYN1_0439 540829 542985 - putative liporotein overlaps another CDS with the same product name gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0439 MMSYN1_0440 MMSYN1_0440 MMSYN1_0440 542985 545921 - putative liporotein overlaps another CDS with the same product name gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0440 MMSYN1_0441 MMSYN1_0441 MMSYN1_0441 546124 547362 + probable cysteine desulfurase identified by match to protein family HMM PF00266 gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0441 MMSYN1_0442 MMSYN1_0442 MMSYN1_0442 547365 547802 + nitrogen fixation protein nifu identified by match to protein family HMM PF01592 gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0442 MMSYN1_0443 MMSYN1_0443 mthfs mthfs 547795 548358 + 5-formyltetrahydrofolate cyclo-ligase identified by match to protein family HMM PF01812%3B match to protein family HMM TIGR02727 gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0443 MMSYN1_0444 MMSYN1_0444 MMSYN1_0444 548379 550274 + endopeptidase O identified by match to protein family HMM PF01431%3B match to protein family HMM PF05649 gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0444 MMSYN1_0445 MMSYN1_0445 pgi pgi 550494 551777 + glucose-6-phosphate isomerase identified by match to protein family HMM PF00342 gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0445 MMSYN1_0446 MMSYN1_0446 MMSYN1_0446 551789 552253 + conserved hypothetical protein gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0446 MMSYN1_0447 MMSYN1_0447 MMSYN1_0447 552275 552778 + dUTPase superfamily identified by match to protein family HMM PF08761 gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0447 MMSYN1_0448 MMSYN1_0448 MMSYN1_0448 552795 553562 + rRNA methylase identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032 gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0448 MMSYN1_0449 MMSYN1_0449 tnpA_2 tnpA_2 553645 554187 + IS1296 transposase protein A gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0449 MMSYN1_0450 MMSYN1_0450 tnpB_2 tnpB_2 554325 555056 + IS1296 transposase protein B identified by match to protein family HMM PF00665 gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0450 MMSYN1_0451 MMSYN1_0451 MMSYN1_0451 555218 556633 + NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase)(glyceraldehyde-3-phosphate dehydrogenase [nadp+]) (triosephosphatedehydrogenase) identified by match to protein family HMM PF00171 gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0451 MMSYN1_0452 MMSYN1_0452 parE parE 556820 558751 + DNA topoisomerase IV%2C B subunit identified by match to protein family HMM PF00204%3B match to protein family HMM PF00986%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR01058 gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0452 MMSYN1_0453 MMSYN1_0453 parC parC 558753 561449 + DNA topoisomerase IV%2C A subunit identified by match to protein family HMM PF00521%3B match to protein family HMM PF03989%3B match to protein family HMM TIGR01061 gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0453 MMSYN1_0454 MMSYN1_0454 MMSYN1_0454 561557 563740 + hypothetical protein identified by glimmer%3B putative gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0454 MMSYN1_0455 MMSYN1_0455 MMSYN1_0455 563782 565299 - putative membrane protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0455 MMSYN1_0460 MMSYN1_0460 MMSYN1_0460 566641 570003 + bacterial surface protein 26-residue repeat protein (3 repeats) identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0460 MMSYN1_0461 MMSYN1_0461 tnpB_3 tnpB_3 570054 570785 - IS1296 transposase protein B identified by match to protein family HMM PF00665 gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0461 MMSYN1_0462 MMSYN1_0462 tnpA_3 tnpA_3 570923 571465 - IS1296 transposase protein A gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0462 MMSYN1_0463 MMSYN1_0463 MMSYN1_0463 571530 572708 - NADH dependent flavin oxidoreductase identified by match to protein family HMM PF00724 gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0463 MMSYN1_0464 MMSYN1_0464 MMSYN1_0464 572708 573745 - lipoate--protein ligase identified by match to protein family HMM PF03099%3B match to protein family HMM TIGR00545 gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0464 MMSYN1_0465 MMSYN1_0465 MMSYN1_0465 573723 574580 - conserved hypothetical protein gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0465 MMSYN1_0466 MMSYN1_0466 MMSYN1_0466 574582 574926 - glycine cleavage system H protein gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0466 MMSYN1_0467 MMSYN1_0467 MMSYN1_0467 575113 575907 + triacylglycerol lipase identified by match to protein family HMM PF00561 gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0467 MMSYN1_0468 MMSYN1_0468 MMSYN1_0468 575909 576703 + lipase-esterase identified by match to protein family HMM PF00561%3B overlaps another CDS with the same product name gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0468 MMSYN1_0469 MMSYN1_0469 MMSYN1_0469 576697 577506 + lipase-esterase identified by match to protein family HMM PF00561%3B overlaps another CDS with the same product name gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0469 MMSYN1_0470 MMSYN1_0470 MMSYN1_0470 577525 578658 - conserved hypothetical protein identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0470 MMSYN1_0471 MMSYN1_0471 MMSYN1_0471 578789 578920 - hypothetical protein identified by glimmer%3B putative gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0471 MMSYN1_0472 MMSYN1_0472 MMSYN1_0472 578922 580322 + putative liporotein gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0472 MMSYN1_0473 MMSYN1_0473 MMSYN1_0473 580469 581188 + ABC transporter%2C ATP binding protein identified by match to protein family HMM PF00005 gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0473 MMSYN1_0474 MMSYN1_0474 MMSYN1_0474 581188 581943 + integral membrane protein identified by match to protein family HMM PF01061 gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0474 MMSYN1_0475 MMSYN1_0475 ldh ldh 582072 583028 - L-lactate dehydrogenase identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866%3B match to protein family HMM TIGR01771 gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0475 MMSYN1_0476 MMSYN1_0476 nagA nagA 583080 584237 - N-acetylglucosamine-6-phosphate deacetylase identified by match to protein family HMM PF01979%3B match to protein family HMM TIGR00221 gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0476 MMSYN1_0477 MMSYN1_0477 MMSYN1_0477 584406 585140 + conserved hypothetical protein gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0477 MMSYN1_0478 MMSYN1_0478 MMSYN1_0478 585152 585736 - conserved hypothetical protein gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0478 MMSYN1_0479 MMSYN1_0479 MMSYN1_0479 585741 587387 - conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0479 MMSYN1_0480 MMSYN1_0480 MMSYN1_0480 587539 589539 + conserved hypothetical protein gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0480 MMSYN1_0481 MMSYN1_0481 vlcE vlcE 589611 590048 - lipoprotein%2C putative (VlcE) gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0481 MMSYN1_0482 MMSYN1_0482 rpsU rpsU 590364 590528 + ribosomal protein S21 identified by match to protein family HMM TIGR00030 gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0482 MMSYN1_0483 MMSYN1_0483 ruvA ruvA 590637 591197 + holliday junction DNA helicase RuvA gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0483 MMSYN1_0484 MMSYN1_0484 ruvB ruvB 591214 592137 + holliday junction ATP-dependent DNA helicase RuvB identified by match to protein family HMM PF00004%3B match to protein family HMM PF05491%3B match to protein family HMM PF05496%3B match to protein family HMM PF07728 gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0484 MMSYN1_0485 MMSYN1_0485 MMSYN1_0485 592215 593573 + dihydrolipoamide dehydrogenase identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992 gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0485 MMSYN1_0486 MMSYN1_0486 MMSYN1_0486 593589 594398 - conserved hypothetical protein gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0486 MMSYN1_0487 MMSYN1_0487 MMSYN1_0487 594474 595394 + conserved hypothetical protein gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0487 MMSYN1_0488 MMSYN1_0488 yqeH yqeH 595403 596506 + ribosome biogenesis GTPase YqeH identified by match to protein family HMM TIGR03597 gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0488 MMSYN1_0489 MMSYN1_0489 dinB dinB 596515 597738 - DNA polymerase IV identified by match to protein family HMM PF00817 gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0489 MMSYN1_0490 MMSYN1_0490 MMSYN1_0490 597882 600620 + papain family cysteine protease%2C putative identified by match to protein family HMM PF00112 gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0490 MMSYN1_0491 MMSYN1_0491 udk udk 600698 601321 - uridine kinase identified by match to protein family HMM PF00485%3B match to protein family HMM TIGR00235 gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0491 MMSYN1_0492 MMSYN1_0492 MMSYN1_0492 601345 601785 - conserved hypothetical protein gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0492 MMSYN1_0493 MMSYN1_0493 MMSYN1_0493 601858 603207 - Xaa-His dipeptidase identified by match to protein family HMM PF01546%3B match to protein family HMM TIGR01887 gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0493 MMSYN1_0494 MMSYN1_0494 MMSYN1_0494 603363 604043 - putative N-acetylmannosamine-6-phosphate 2-epimerase (ManNAc-6-P epimerase) identified by match to protein family HMM PF04131 gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0494 MMSYN1_0495 MMSYN1_0495 MMSYN1_0495 604102 604977 - ROK family protein identified by match to protein family HMM PF00480 gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0495 MMSYN1_0496 MMSYN1_0496 MMSYN1_0496 604970 605419 - conserved hypothetical cytosolic protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF04074%3B match to protein family HMM TIGR00022 pseudogene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0496 MMSYN1_0497 MMSYN1_0497 MMSYN1_0497 605428 607131 - sodium:solute symporter family identified by match to protein family HMM PF00474 gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0497 MMSYN1_0498 MMSYN1_0498 nanA nanA 607133 608020 - N-acetylneuraminate lyase (N-acetylneuraminic acidaldolase) (N-acetylneuraminate pyruvate-lyase) (Sialic acid lyase)(Sialate lyase) (Sialic acid aldolase) identified by match to protein family HMM PF00701 gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0498 MMSYN1_0499 MMSYN1_0499 rpmA rpmA 608185 608466 - ribosomal protein L27 identified by match to protein family HMM PF01016%3B match to protein family HMM TIGR00062 gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0499 MMSYN1_0500 MMSYN1_0500 MMSYN1_0500 608468 608731 - conserved hypothetical protein identified by match to protein family HMM PF04327 gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0500 MMSYN1_0501 MMSYN1_0501 rplU rplU 608785 609087 - ribosomal protein L21 identified by match to protein family HMM PF00829%3B match to protein family HMM TIGR00061 gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0501 MMSYN1_0503 MMSYN1_0503 MMSYN1_0503 609233 609634 - conserved hypothetical protein gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0503 MMSYN1_0504 MMSYN1_0504 MMSYN1_0504 609657 610544 - conserved hypothetical protein identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR00096 gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0504 MMSYN1_0505 MMSYN1_0505 MMSYN1_0505 610920 611993 + putative liporotein gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0505 MMSYN1_0506 MMSYN1_0506 MMSYN1_0506 612086 612174 - tRNA-Leu tRNA gene503 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0506 MMSYN1_0507 MMSYN1_0507 MMSYN1_0507 612185 612260 - tRNA-Lys tRNA gene504 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0507 MMSYN1_0508 MMSYN1_0508 MMSYN1_0508 612265 612339 - tRNA-Gln tRNA gene505 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0508 MMSYN1_0509 MMSYN1_0509 MMSYN1_0509 612346 612429 - tRNA-Tyr tRNA gene506 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0509 MMSYN1_0510 MMSYN1_0510 MMSYN1_0510 612436 612511 - tRNA-Thr tRNA gene507 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0510 MMSYN1_0511 MMSYN1_0511 MMSYN1_0511 612638 613261 - conserved hypothetical protein gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0511 MMSYN1_0512 MMSYN1_0512 plsC plsC 613310 614248 - 1-acyl-sn-glycerol-3-phosphate acyltransferase identified by match to protein family HMM PF01553 gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0512 MMSYN1_0513 MMSYN1_0513 acpS acpS 614414 614746 - holo-[acyl-carrier-protein] synthase identified by match to protein family HMM PF01648%3B match to protein family HMM TIGR00556 gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0513 MMSYN1_0514 MMSYN1_0514 MMSYN1_0514 614766 615842 - conserved hypothetical protein gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0514 MMSYN1_0515 MMSYN1_0515 MMSYN1_0515 615883 616365 - deoxycytidylate deaminase (dCMP deaminase) identified by match to protein family HMM PF00383 gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0515 MMSYN1_0516 MMSYN1_0516 MMSYN1_0516 616368 617669 - putative membrane protein gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0516 MMSYN1_0517 MMSYN1_0517 MMSYN1_0517 617662 618594 - ribosomal large subunit pseudouridine synthase D identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00005 gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0517 MMSYN1_0518 MMSYN1_0518 lspA lspA 618575 619183 - signal peptidase II gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0518 MMSYN1_0519 MMSYN1_0519 ileS ileS 619174 621921 - isoleucine--tRNA ligase identified by match to protein family HMM PF00133%3B match to protein family HMM PF06827%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00392 gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0519 MMSYN1_0520 MMSYN1_0520 MMSYN1_0520 622614 623603 - conserved hypothetical protein gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0520 MMSYN1_0521 MMSYN1_0521 MMSYN1_0521 623616 624032 - conserved hypothetical protein gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0521 MMSYN1_0522 MMSYN1_0522 ftsZ ftsZ 624044 625201 - cell division protein FtsZ identified by match to protein family HMM PF00091%3B match to protein family HMM PF03953%3B match to protein family HMM TIGR00065 gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0522 MMSYN1_0523 MMSYN1_0523 MMSYN1_0523 625316 626476 - conserved hypothetical protein gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0523 MMSYN1_0524 MMSYN1_0524 mraW mraW 626485 627411 - S-adenosyl-methyltransferase MraW identified by match to protein family HMM PF01795%3B match to protein family HMM TIGR00006 gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0524 MMSYN1_0525 MMSYN1_0525 mraZ mraZ 627420 627821 - protein MraZ identified by match to protein family HMM PF02381 gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0525 MMSYN1_0526 MMSYN1_0526 rpmF rpmF 627928 628107 - ribosomal protein L32 identified by match to protein family HMM PF01783%3B match to protein family HMM TIGR01031 gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0526 MMSYN1_0527 MMSYN1_0527 MMSYN1_0527 628122 628640 - conserved hypothetical protein gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0527 MMSYN1_0528 MMSYN1_0528 pheT pheT 628640 631024 - phenylalanyl-tRNA synthetase%2C beta subunit identified by match to protein family HMM PF01588%3B match to protein family HMM PF03147%3B match to protein family HMM PF03484%3B match to protein family HMM TIGR00472 gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0528 MMSYN1_0529 MMSYN1_0529 pheS pheS 631033 632085 - phenylalanyl-tRNA synthetase%2C alpha subunit identified by match to protein family HMM PF01409%3B match to protein family HMM PF02912%3B match to protein family HMM TIGR00468 gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0529 MMSYN1_0530 MMSYN1_0530 MMSYN1_0530 632115 632723 - conserved hypothetical protein gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0530 MMSYN1_0531 MMSYN1_0531 MMSYN1_0531 632732 637180 - efflux ABC transporter%2C permease protein identified by match to protein family HMM PF02687 gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0531 MMSYN1_0532 MMSYN1_0532 rrf rrf 637296 637404 - 5S ribosomal RNA rRNA gene529 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0532 MMSYN1_0533 MMSYN1_0533 rrl rrl 637479 640373 - 23S ribosomal RNA rRNA gene530 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0533 MMSYN1_0534 MMSYN1_0534 rrs rrs 640604 642127 - 16S ribosomal RNA rRNA gene531 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0534 MMSYN1_0535 MMSYN1_0535 argS argS 642339 644003 - arginine--tRNA ligase identified by match to protein family HMM PF00750%3B match to protein family HMM PF03485%3B match to protein family HMM PF05746%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00456 gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0535 MMSYN1_0536 MMSYN1_0536 frr frr 644005 644553 - ribosome recycling factor identified by match to protein family HMM PF01765%3B match to protein family HMM TIGR00496 gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0536 MMSYN1_0537 MMSYN1_0537 pyrH pyrH 644564 645277 - UMP kinase identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR02075 gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0537 MMSYN1_0538 MMSYN1_0538 MMSYN1_0538 645411 646016 - conserved hypothetical protein gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0538 MMSYN1_0539 MMSYN1_0539 tsf tsf 646016 646903 - translation elongation factor Ts identified by match to protein family HMM PF00627%3B match to protein family HMM PF00889%3B match to protein family HMM TIGR00116 gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0539 MMSYN1_0540 MMSYN1_0540 rpsB rpsB 646915 647793 - ribosomal protein S2 identified by match to protein family HMM PF00318%3B match to protein family HMM TIGR01011 gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0540 MMSYN1_0541 MMSYN1_0541 dnaJ dnaJ 648001 649119 - chaperone protein DnaJ identified by match to protein family HMM PF00226%3B match to protein family HMM PF00684%3B match to protein family HMM PF01556%3B match to protein family HMM TIGR02349 gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0541 MMSYN1_0542 MMSYN1_0542 dnaK dnaK 649183 650958 - chaperone protein DnaK identified by match to protein family HMM PF00012%3B match to protein family HMM TIGR02350 gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0542 MMSYN1_0543 MMSYN1_0543 grpE grpE 651017 651619 - co-chaperone GrpE identified by match to protein family HMM PF01025 gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0543 MMSYN1_0544 MMSYN1_0544 hrcA hrcA 651621 652643 - heat-inducible transcription repressor HrcA identified by match to protein family HMM PF01628%3B match to protein family HMM TIGR00331 gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0544 MMSYN1_0545 MMSYN1_0545 MMSYN1_0545 652648 654789 - ATPase family associated with various cellular activities (AAA) protein identified by match to protein family HMM PF00004%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728 gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0545 MMSYN1_0546 MMSYN1_0546 MMSYN1_0546 654952 655188 - putative hydrolase of the HAD family%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0546 MMSYN1_0547 MMSYN1_0547 MMSYN1_0547 655176 655817 - putative hydrolase of the HAD family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF08282 pseudogene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0547 MMSYN1_0548 MMSYN1_0548 MMSYN1_0548 655817 656362 - rRNA Methylase identified by match to protein family HMM PF00588 gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0548 MMSYN1_0549 MMSYN1_0549 MMSYN1_0549 656375 656977 - Ham1 family identified by match to protein family HMM PF01725 gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0549 MMSYN1_0550 MMSYN1_0550 MMSYN1_0550 657179 659694 + putative lipoprotein%2C authentic frameshift%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0550 MMSYN1_0551 MMSYN1_0551 MMSYN1_0551 659874 662378 + putative liporotein gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0551 MMSYN1_0552 MMSYN1_0552 MMSYN1_0552 662695 663483 + conserved hypothetical integrative conjugal element protein gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0552 MMSYN1_0553 MMSYN1_0553 MMSYN1_0553 663752 664993 + conserved hypothetical integrative conjugal element protein gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0553 MMSYN1_0554 MMSYN1_0554 MMSYN1_0554 665166 665999 + C-5 cytosine-specific DNA methylase gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0554 MMSYN1_0555 MMSYN1_0555 MMSYN1_0555 666028 668043 + membrane protein%2C putative (TraD/TraG family) gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0555 MMSYN1_0556 MMSYN1_0556 MMSYN1_0556 668059 669015 + conserved hypothetical integrative conjugal element protein identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167%3B overlaps another CDS with the same product name gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0556 MMSYN1_0557 MMSYN1_0557 MMSYN1_0557 668999 669916 + conserved hypothetical integrative conjugal element protein identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167%3B overlaps another CDS with the same product name gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0557 MMSYN1_0558 MMSYN1_0558 MMSYN1_0558 669931 670347 + single-strand binding family protein identified by match to protein family HMM PF00436%3B match to protein family HMM PF01336 gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0558 MMSYN1_0559 MMSYN1_0559 MMSYN1_0559 670612 671802 + conserved hypothetical integrative conjugal element protein identified by match to protein family HMM PF06114 gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0559 MMSYN1_0560 MMSYN1_0560 MMSYN1_0560 672040 673572 + putative liporotein gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0560 MMSYN1_0561 MMSYN1_0561 MMSYN1_0561 673574 673765 + conserved hypothetical integrative conjugal element protein gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0561 MMSYN1_0562 MMSYN1_0562 MMSYN1_0562 673862 674092 + conserved hypothetical integrative conjugal element protein gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0562 MMSYN1_0563 MMSYN1_0563 MMSYN1_0563 674120 676843 + putative membrane protein gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0563 MMSYN1_0564 MMSYN1_0564 MMSYN1_0564 676950 677135 + conserved hypothetical integrative conjugal element protein gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0564 MMSYN1_0565 MMSYN1_0565 MMSYN1_0565 677225 677602 + conserved hypothetical integrative conjugal element protein gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0565 MMSYN1_0566 MMSYN1_0566 MMSYN1_0566 677609 679531 + putative membrane protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0566 MMSYN1_0567 MMSYN1_0567 MMSYN1_0567 679556 682399 + putative membrane protein gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0567 MMSYN1_0568 MMSYN1_0568 MMSYN1_0568 682412 683077 + conserved hypothetical integrative conjugal element protein gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0568 MMSYN1_0569 MMSYN1_0569 MMSYN1_0569 683124 688091 + putative membrane protein gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0569 MMSYN1_0570 MMSYN1_0570 MMSYN1_0570 688547 689293 + conserved hypothetical integrative conjugal element protein gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0570 MMSYN1_0571 MMSYN1_0571 MMSYN1_0571 689489 689854 + conserved hypothetical integrative conjugal element protein gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0571 MMSYN1_0572 MMSYN1_0572 MMSYN1_0572 690078 690992 + CobQ/CobB/MinD/ParA nucleotide binding domain%2C putative identified by match to protein family HMM PF01656 gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0572 MMSYN1_0573 MMSYN1_0573 MMSYN1_0573 691042 692274 + conserved hypothetical integrative conjugal element protein gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0573 MMSYN1_0574 MMSYN1_0574 MMSYN1_0574 692861 695401 + putative liporotein gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0574 MMSYN1_0575 MMSYN1_0575 atpD_1 atpD_1 695457 696836 - ATP synthase F1%2C beta subunit identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM TIGR01039 gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0575 MMSYN1_0576 MMSYN1_0576 atpA_1 atpA_1 696836 698383 - FOF1 ATP synthase%2C alpha subunit identified by match to protein family HMM PF00006 gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0576 MMSYN1_0577 MMSYN1_0577 MMSYN1_0577 698388 700691 - conserved hypothetical protein gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0577 MMSYN1_0578 MMSYN1_0578 MMSYN1_0578 700693 701136 - conserved hypothetical protein gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0578 MMSYN1_0579 MMSYN1_0579 MMSYN1_0579 701136 702047 - conserved hypothetical protein gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0579 MMSYN1_0580 MMSYN1_0580 MMSYN1_0580 702049 702543 - conserved hypothetical protein gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0580 MMSYN1_0581 MMSYN1_0581 MMSYN1_0581 702518 703981 - putative membrane protein gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0581 MMSYN1_0582 MMSYN1_0582 MMSYN1_0582 704013 706598 - putative liporotein gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0582 MMSYN1_0583 MMSYN1_0583 MMSYN1_0583 706621 708873 - mycoplasma virulence signal region (Myco_arth_vir_N) family identified by match to protein family HMM PF09610%3B match to protein family HMM TIGR02184 gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0583 MMSYN1_0584 MMSYN1_0584 MMSYN1_0584 709145 711715 - putative liporotein gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0584 MMSYN1_0585 MMSYN1_0585 MMSYN1_0585 711735 713984 - mycoplasma virulence signal region (Myco_arth_vir_N) family identified by match to protein family HMM PF09610%3B match to protein family HMM TIGR02184 gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0585 MMSYN1_0586 MMSYN1_0586 MMSYN1_0586 714177 716732 - putative liporotein gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0586 MMSYN1_0587 MMSYN1_0587 MMSYN1_0587 716747 718999 - mycoplasma virulence signal region (Myco_arth_vir_N) family identified by match to protein family HMM PF09610%3B match to protein family HMM TIGR02184 gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0587 MMSYN1_0588 MMSYN1_0588 MMSYN1_0588 719219 721780 - putative liporotein gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0588 MMSYN1_0589 MMSYN1_0589 MMSYN1_0589 721800 724058 - mycoplasma virulence signal region (Myco_arth_vir_N) family identified by match to protein family HMM PF09610%3B match to protein family HMM TIGR02184 gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0589 MMSYN1_0590 MMSYN1_0590 MMSYN1_0590 726553 727071 - type III restriction enzyme%2C res subunit identified by match to protein family HMM PF04851 gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0590 MMSYN1_0591 MMSYN1_0591 mmyCImod mmyCImod 727058 728260 - Type III restriction-modification system (MmyCI) adenine DNA methyltransferase subunit%2C authentic frameshift%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01555 pseudogene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0591 MMSYN1_0592 MMSYN1_0592 MMSYN1_0592 729115 730587 - cdsf gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0592 MMSYN1_0593 MMSYN1_0593 MMSYN1_0593 730811 731089 - hypothetical protein identified by glimmer%3B putative gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0593 MMSYN1_0594 MMSYN1_0594 MMSYN1_0594 731220 732998 - putative membrane protein gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0594 MMSYN1_0595 MMSYN1_0595 MMSYN1_0595 733270 734646 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0595 MMSYN1_0596 MMSYN1_0596 MMSYN1_0596 735282 737948 + hypothetical protein identified by glimmer%3B putative gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0596 MMSYN1_0597 MMSYN1_0597 MMSYN1_0597 738368 738793 + Fic family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02661 pseudogene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0597 MMSYN1_0598 MMSYN1_0598 MMSYN1_0598 739136 740662 + conserved hypothetical protein identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0598 MMSYN1_0599 MMSYN1_0599 MMSYN1_0599 740801 740941 - conserved hypothetical protein gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0599 MMSYN1_0600 MMSYN1_0600 MMSYN1_0600 741755 743587 + RNA-metabolising metallo-beta-lactamase family identified by match to protein family HMM PF00753%3B match to protein family HMM PF07521 gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0600 MMSYN1_0601 MMSYN1_0601 MMSYN1_0601 743662 744606 + putative membrane protein gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0601 MMSYN1_0602 MMSYN1_0602 MMSYN1_0602 744738 746000 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0602 MMSYN1_0603 MMSYN1_0603 MMSYN1_0603 746854 746941 + Small nucleolar RNA snR69 Small nucleolar RNA snR69%3B Rfam score 29.14 ncRNA gene604 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0603 MMSYN1_0604 MMSYN1_0604 MMSYN1_0604 746503 747171 + LemA family identified by match to protein family HMM PF04011 gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0604 MMSYN1_0605 MMSYN1_0605 MMSYN1_0605 747354 747662 + hypothetical protein identified by glimmer%3B putative gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0605 MMSYN1_0606 MMSYN1_0606 pgk pgk 747929 749143 - phosphoglycerate kinase identified by match to protein family HMM PF00162 gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0606 MMSYN1_0607 MMSYN1_0607 gap gap 749255 750271 - glyceraldehyde-3-phosphate dehydrogenase%2C type I identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800%3B match to protein family HMM TIGR01534 gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0607 MMSYN1_0608 MMSYN1_0608 MMSYN1_0608 750372 751310 - primosomal protein gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0608 MMSYN1_0609 MMSYN1_0609 MMSYN1_0609 751320 752504 - chromosome replication initiation/membrane attachment protein identified by match to protein family HMM PF07261 gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0609 MMSYN1_0610 MMSYN1_0610 mutM mutM 752661 753485 - DNA-formamidopyrimidine glycosylase identified by match to protein family HMM PF01149%3B match to protein family HMM PF06831%3B match to protein family HMM TIGR00577 gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0610 MMSYN1_0611 MMSYN1_0611 polA polA 753496 756231 - DNA polymerase I superfamily identified by match to protein family HMM PF00476%3B match to protein family HMM PF01367%3B match to protein family HMM PF02739%3B match to protein family HMM TIGR00593 gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0611 MMSYN1_0612 MMSYN1_0612 MMSYN1_0612 756240 759203 - DNA polymerase III%2C alpha subunit subfamily%2C putative identified by match to protein family HMM PF01336%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00594 gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0612 MMSYN1_0613 MMSYN1_0613 tyrS tyrS 759398 760642 - tyrosine--tRNA ligase identified by match to protein family HMM PF00579%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00234 gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0613 MMSYN1_0614 MMSYN1_0614 MMSYN1_0614 760651 761712 - nicotinate phosphoribosyltransferase gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0614 MMSYN1_0615 MMSYN1_0615 MMSYN1_0615 761690 762298 - phenylalanine-tRNA ligase identified by match to protein family HMM PF01588 gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0615 MMSYN1_0616 MMSYN1_0616 MMSYN1_0616 762373 763212 + EDD domain protein%2C DegV family%2C putative identified by match to protein family HMM PF02645%3B match to protein family HMM TIGR00762 gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0616 MMSYN1_0617 MMSYN1_0617 MMSYN1_0617 763223 764074 + DegV family protein identified by match to protein family HMM PF02645%3B match to protein family HMM TIGR00762 gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0617 MMSYN1_0618 MMSYN1_0618 MMSYN1_0618 764110 764184 - tRNA-Trp tRNA gene618 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0618 MMSYN1_0619 MMSYN1_0619 MMSYN1_0619 764222 764297 - tRNA-Sec tRNA gene619 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0619 MMSYN1_0620 MMSYN1_0620 MMSYN1_0620 764373 764837 - ferric uptake regulator identified by match to protein family HMM PF01475 gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0620 MMSYN1_0621 MMSYN1_0621 MMSYN1_0621 764838 765059 - conserved domain protein identified by match to protein family HMM PF00550 gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0621 MMSYN1_0622 MMSYN1_0622 MMSYN1_0622 765083 765445 - putative liporotein gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0622 MMSYN1_0623 MMSYN1_0623 MMSYN1_0623 765432 766502 - conserved hypothetical protein gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0623 MMSYN1_0624 MMSYN1_0624 MMSYN1_0624 766603 766678 - tRNA-His tRNA gene624 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0624 MMSYN1_0625 MMSYN1_0625 arcC_1 arcC_1 766799 767731 - carbamate kinase 1 identified by match to protein family HMM PF00696 gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0625 MMSYN1_0626 MMSYN1_0626 aguA aguA 767848 768942 - agmatine deiminase identified by match to protein family HMM PF04371%3B match to protein family HMM TIGR03380 gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0626 MMSYN1_0627 MMSYN1_0627 MMSYN1_0627 768949 770367 - amino acid permease family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00324 pseudogene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0627 MMSYN1_0628 MMSYN1_0628 argF argF 770394 771491 - ornithine carbamoyltransferase identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00658 gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0628 MMSYN1_0629 MMSYN1_0629 MMSYN1_0629 771786 772163 - hypothetical protein identified by glimmer%3B putative gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0629 MMSYN1_0630 MMSYN1_0630 MMSYN1_0630 772384 773271 + ABC transporter%2C ATP-binding component identified by match to protein family HMM PF00005 gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0630 MMSYN1_0631 MMSYN1_0631 MMSYN1_0631 773273 774037 + ABC transporter%2C permease protein %2C putative%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0631 MMSYN1_0632 MMSYN1_0632 MMSYN1_0632 774071 774547 - conserved hypothetical protein gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0632 MMSYN1_0633 MMSYN1_0633 MMSYN1_0633 774638 776197 - putative membrane protein gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0633 MMSYN1_0634 MMSYN1_0634 leuS leuS 776264 778678 - leucine--tRNA ligase identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00396 gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0634 MMSYN1_0635 MMSYN1_0635 MMSYN1_0635 778816 778892 - tRNA-Ile tRNA gene635 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0635 MMSYN1_0636 MMSYN1_0636 MMSYN1_0636 778965 781754 - putative liporotein gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0636 MMSYN1_0637 MMSYN1_0637 rpsI rpsI 781913 782311 - ribosomal protein S9 identified by match to protein family HMM PF00380 gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0637 MMSYN1_0638 MMSYN1_0638 rplM rplM 782311 782766 - ribosomal protein L13 identified by match to protein family HMM PF00572%3B match to protein family HMM TIGR01066 gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0638 MMSYN1_0639 MMSYN1_0639 MMSYN1_0639 782896 787041 - efflux ABC transporter%2C permease protein identified by match to protein family HMM PF02687 gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0639 MMSYN1_0640 MMSYN1_0640 MMSYN1_0640 787136 787891 - tRNA pseudouridine synthase A (tRNA-uridine isomeraseI) (tRNA pseudouridylate synthase I) identified by match to protein family HMM PF01416 gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0640 MMSYN1_0641 MMSYN1_0641 MMSYN1_0641 787894 788904 - ABC transporter%2C permease component identified by match to protein family HMM PF02361 gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0641 MMSYN1_0642 MMSYN1_0642 MMSYN1_0642 788918 789829 - cobalt import ATP-binding protein CbiO 1 identified by match to protein family HMM PF00005 gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0642 MMSYN1_0643 MMSYN1_0643 MMSYN1_0643 789817 791043 - cobalt import ATP-binding protein CbiO 2 identified by match to protein family HMM PF00005 gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0643 MMSYN1_0644 MMSYN1_0644 rplQ rplQ 791151 791510 - ribosomal protein L17 identified by match to protein family HMM PF01196%3B match to protein family HMM TIGR00059 gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0644 MMSYN1_0645 MMSYN1_0645 rpoA rpoA 791530 792483 - DNA-directed RNA polymerase%2C alpha subunit identified by match to protein family HMM PF01000%3B match to protein family HMM PF01193%3B match to protein family HMM PF03118%3B match to protein family HMM TIGR02027 gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0645 MMSYN1_0646 MMSYN1_0646 rpsK rpsK 792487 792876 - 30S ribosomal protein S11 identified by match to protein family HMM PF00411%3B match to protein family HMM TIGR03632 gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0646 MMSYN1_0647 MMSYN1_0647 rpsM rpsM 792902 793267 - 30S ribosomal protein S13 identified by match to protein family HMM PF00416%3B match to protein family HMM TIGR03631 gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0647 MMSYN1_0648 MMSYN1_0648 rpmJ rpmJ 793304 793417 - ribosomal protein L36 identified by match to protein family HMM PF00444%3B match to protein family HMM TIGR01022 gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0648 MMSYN1_0649 MMSYN1_0649 infA infA 793486 793710 - translation initiation factor IF-1 identified by match to protein family HMM PF00575%3B match to protein family HMM PF01176%3B match to protein family HMM TIGR00008 gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0649 MMSYN1_0650 MMSYN1_0650 map map 793722 794477 - methionine aminopeptidase%2C type I identified by match to protein family HMM PF00557%3B match to protein family HMM TIGR00500 gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0650 MMSYN1_0651 MMSYN1_0651 adk adk 794477 795118 - adenylate kinase identified by match to protein family HMM PF00406%3B match to protein family HMM PF05191%3B match to protein family HMM TIGR01351 gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0651 MMSYN1_0652 MMSYN1_0652 secY secY 795246 796694 - preprotein translocase%2C SecY subunit identified by match to protein family HMM PF00344%3B match to protein family HMM TIGR00967 gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0652 MMSYN1_0653 MMSYN1_0653 rplO rplO 796694 797131 - ribosomal protein L15 identified by match to protein family HMM PF00256%3B match to protein family HMM PF01305%3B match to protein family HMM TIGR01071 gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0653 MMSYN1_0654 MMSYN1_0654 rpsE rpsE 797150 797914 - 30S ribosomal protein S5 identified by match to protein family HMM PF00333%3B match to protein family HMM PF03719%3B match to protein family HMM TIGR01021 gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0654 MMSYN1_0655 MMSYN1_0655 rplR rplR 797933 798283 - ribosomal protein L18 identified by match to protein family HMM PF00861%3B match to protein family HMM TIGR00060 gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0655 MMSYN1_0656 MMSYN1_0656 rplF rplF 798309 798851 - ribosomal protein L6 identified by match to protein family HMM PF00347%3B match to protein family HMM TIGR03654 gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0656 MMSYN1_0657 MMSYN1_0657 rpsH rpsH 798865 799254 - ribosomal protein S8 identified by match to protein family HMM PF00410 gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0657 MMSYN1_0658 MMSYN1_0658 rpsN rpsN 799274 799459 - ribosomal protein S14p/S29e identified by match to protein family HMM PF00253 gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0658 MMSYN1_0659 MMSYN1_0659 rplE rplE 799478 800020 - 50S ribosomal protein L5 (BL6) identified by match to protein family HMM PF00281%3B match to protein family HMM PF00673 gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0659 MMSYN1_0660 MMSYN1_0660 rplX rplX 800039 800365 - ribosomal protein L24 identified by match to protein family HMM PF00467%3B match to protein family HMM TIGR01079 gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0660 MMSYN1_0661 MMSYN1_0661 rplN rplN 800379 800747 - ribosomal protein L14 identified by match to protein family HMM PF00238%3B match to protein family HMM TIGR01067 gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0661 MMSYN1_0662 MMSYN1_0662 rpsQ rpsQ 800763 801020 - 30S ribosomal protein S17 identified by match to protein family HMM PF00366%3B match to protein family HMM TIGR03635 gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0662 MMSYN1_0663 MMSYN1_0663 rpmC rpmC 801020 801436 - 50S ribosomal protein L29 identified by match to protein family HMM PF00831%3B match to protein family HMM TIGR00012 gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0663 MMSYN1_0664 MMSYN1_0664 rplP rplP 801436 801849 - ribosomal protein L16 identified by match to protein family HMM PF00252%3B match to protein family HMM TIGR01164 gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0664 MMSYN1_0665 MMSYN1_0665 rpsC rpsC 801852 802553 - ribosomal protein S3 identified by match to protein family HMM PF00189%3B match to protein family HMM PF00417%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR01009 gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0665 MMSYN1_0666 MMSYN1_0666 rplV rplV 802571 802906 - ribosomal protein L22 identified by match to protein family HMM PF00237%3B match to protein family HMM TIGR01044 gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0666 MMSYN1_0667 MMSYN1_0667 rpsS rpsS 802930 803196 - ribosomal protein S19 identified by match to protein family HMM PF00203%3B match to protein family HMM TIGR01050 gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0667 MMSYN1_0668 MMSYN1_0668 rplB rplB 803218 804066 - ribosomal protein L2 identified by match to protein family HMM PF00181%3B match to protein family HMM PF03947%3B match to protein family HMM TIGR01171 gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0668 MMSYN1_0669 MMSYN1_0669 rplW rplW 804121 804405 - ribosomal protein L23 identified by match to protein family HMM PF00276 gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0669 MMSYN1_0670 MMSYN1_0670 rplD rplD 804405 805031 - ribosomal protein L4/L1 family identified by match to protein family HMM PF00573 gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0670 MMSYN1_0671 MMSYN1_0671 rplC rplC 805044 805715 - 50S ribosomal protein L3 identified by match to protein family HMM PF00297%3B match to protein family HMM TIGR03625 gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0671 MMSYN1_0672 MMSYN1_0672 rpsJ rpsJ 805791 806099 - ribosomal protein S10 identified by match to protein family HMM PF00338%3B match to protein family HMM TIGR01049 gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0672 MMSYN1_0673 MMSYN1_0673 dhaK dhaK 806351 807349 - dihydroxyacetone kinase%2C DhaK subunit identified by match to protein family HMM PF02733%3B match to protein family HMM TIGR02363 gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0673 MMSYN1_0674 MMSYN1_0674 MMSYN1_0674 807457 809085 - trehalose-6-phosphate hydrolase (Alpha%2Calpha-phosphotrehalase) identified by match to protein family HMM PF00128 gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0674 MMSYN1_0675 MMSYN1_0675 MMSYN1_0675 809093 810640 - PTS system%2C trehalose-specific iibc component identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378 gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0675 MMSYN1_0676 MMSYN1_0676 MMSYN1_0676 810706 811692 - transcription regulator%2C LacI family gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0676 MMSYN1_0677 MMSYN1_0677 MMSYN1_0677 812217 813128 + putative membrane protein gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0677 MMSYN1_0678 MMSYN1_0678 MMSYN1_0678 813370 813445 - tRNA-Thr tRNA gene678 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0678 MMSYN1_0679 MMSYN1_0679 MMSYN1_0679 813458 813533 - tRNA-Val tRNA gene679 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0679 MMSYN1_0680 MMSYN1_0680 MMSYN1_0680 813541 813616 - tRNA-Glu tRNA gene680 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0680 MMSYN1_0681 MMSYN1_0681 MMSYN1_0681 813624 813699 - tRNA-Asn tRNA gene681 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0681 MMSYN1_0682 MMSYN1_0682 MMSYN1_0682 813801 814964 - putative liporotein identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0682 MMSYN1_0683 MMSYN1_0683 MMSYN1_0683 815077 815832 - conserved hypothetical protein gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0683 MMSYN1_0684 MMSYN1_0684 folD folD 815822 816688 - bifunctional protein FolD identified by match to protein family HMM PF00763%3B match to protein family HMM PF02882 gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0684 MMSYN1_0685 MMSYN1_0685 MMSYN1_0685 816697 818298 - sodium transport protein identified by match to protein family HMM PF02386 gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0685 MMSYN1_0686 MMSYN1_0686 MMSYN1_0686 818377 819105 + K+%2C Na+ uptake protein integral membrane subunit identified by match to protein family HMM PF02080%3B match to protein family HMM PF02254 gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0686 MMSYN1_0687 MMSYN1_0687 gatB gatB 819132 820571 - glutamyl-tRNA(Gln) amidotransferase%2C B subunit identified by match to protein family HMM PF01162%3B match to protein family HMM PF02637%3B match to protein family HMM PF02934%3B match to protein family HMM TIGR00133 gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0687 MMSYN1_0688 MMSYN1_0688 gatA gatA 820573 822030 - glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) identified by match to protein family HMM PF01425 gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0688 MMSYN1_0689 MMSYN1_0689 gatC gatC 822030 822326 - glutamyl-tRNA(Gln) amidotransferase%2C C subunit identified by match to protein family HMM PF02686%3B match to protein family HMM TIGR00135 gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0689 MMSYN1_0690 MMSYN1_0690 ligA ligA 822328 824334 - DNA ligase%2C NAD-dependent identified by match to protein family HMM PF00533%3B match to protein family HMM PF01653%3B match to protein family HMM PF03119%3B match to protein family HMM PF03120%3B match to protein family HMM TIGR00575 gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0690 MMSYN1_0691 MMSYN1_0691 MMSYN1_0691 824338 826359 - putative membrane protein gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0691 MMSYN1_0692 MMSYN1_0692 MMSYN1_0692 826362 827270 - 23S rRNA pseudouridine synthase identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479 gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0692 MMSYN1_0693 MMSYN1_0693 MMSYN1_0693 827273 828241 - conserved %2C caax amino protease family identified by match to protein family HMM PF02517 gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0693 MMSYN1_0694 MMSYN1_0694 MMSYN1_0694 828297 828566 - phosphocarrier%2C HPr family identified by match to protein family HMM PF00381%3B match to protein family HMM TIGR01003 gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0694 MMSYN1_0695 MMSYN1_0695 MMSYN1_0695 828631 830799 - UvrD/REP helicase domain protein identified by match to protein family HMM PF00580 gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0695 MMSYN1_0696 MMSYN1_0696 MMSYN1_0696 830816 831571 - RDD family protein identified by match to protein family HMM PF06271 gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0696 MMSYN1_0697 MMSYN1_0697 MMSYN1_0697 831571 832527 - glycosyltransferase gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0697 MMSYN1_0698 MMSYN1_0698 MMSYN1_0698 832678 833904 - lipoprotein. putative identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0698 MMSYN1_0699 MMSYN1_0699 msrA/B msrA/B 833993 834922 - peptide methionine sulfoxide reductase MsrA/msrB identified by match to protein family HMM PF01625%3B match to protein family HMM PF01641%3B match to protein family HMM TIGR00357%3B match to protein family HMM TIGR00401 gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0699 MMSYN1_0700 MMSYN1_0700 MMSYN1_0700 835036 837222 - putative liporotein gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0700 MMSYN1_0701 MMSYN1_0701 MMSYN1_0701 837470 839818 - putative liporotein gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0701 MMSYN1_0702 MMSYN1_0702 MMSYN1_0702 839827 840729 - transmembrane protein gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0702 MMSYN1_0703 MMSYN1_0703 MMSYN1_0703 840856 842691 - conserved hypothetical protein identified by match to protein family HMM PF03235%3B match to protein family HMM PF07510 gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0703 MMSYN1_0704 MMSYN1_0704 MMSYN1_0704 842694 843260 - conserved hypothetical protein gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0704 MMSYN1_0705 MMSYN1_0705 MMSYN1_0705 843263 844099 - C-5 cytosine-specific DNA methylase gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0705 MMSYN1_0706 MMSYN1_0706 MMSYN1_0706 844369 846117 - alkylphosphonate ABC transporter%2C permease component identified by match to protein family HMM PF00528 gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0706 MMSYN1_0707 MMSYN1_0707 MMSYN1_0707 846081 846830 - alkylphosphonate ABC transporter%2C ATP-binding component identified by match to protein family HMM PF00005 gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0707 MMSYN1_0708 MMSYN1_0708 MMSYN1_0708 846844 848307 - alkylphosphonate ABC transporter%2C substrate-bindin gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0708 MMSYN1_0710 MMSYN1_0710 MMSYN1_0710 848530 849393 - hydrolase of the HAD family identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484 gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0710 MMSYN1_0711 MMSYN1_0711 MMSYN1_0711 849525 850715 + aminotransferase identified by match to protein family HMM PF00155 gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0711 MMSYN1_0712 MMSYN1_0712 MMSYN1_0712 850725 851126 + endoribonuclease L-PSP%2C putative identified by match to protein family HMM PF01042%3B match to protein family HMM TIGR00004 gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0712 MMSYN1_0713 MMSYN1_0713 MMSYN1_0713 851162 852493 - conserved hypothetical protein identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0713 MMSYN1_0714 MMSYN1_0714 MMSYN1_0714 852523 853779 - conserved hypothetical protein identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0714 MMSYN1_0715 MMSYN1_0715 MMSYN1_0715 853966 855234 - conserved hypothetical protein identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0715 MMSYN1_0716 MMSYN1_0716 MMSYN1_0716 855376 856518 + conserved hypothetical protein gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0716 MMSYN1_0717 MMSYN1_0717 MMSYN1_0717 856724 856800 + tRNA-Arg tRNA gene716 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0717 MMSYN1_0718 MMSYN1_0718 MMSYN1_0718 856848 856924 + tRNA-Pro tRNA gene717 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0718 MMSYN1_0719 MMSYN1_0719 MMSYN1_0719 856935 857010 + tRNA-Ala tRNA gene718 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0719 MMSYN1_0720 MMSYN1_0720 MMSYN1_0720 857015 857091 + tRNA-Met tRNA gene719 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0720 MMSYN1_0721 MMSYN1_0721 MMSYN1_0721 857103 857179 + tRNA-Met tRNA gene720 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0721 MMSYN1_0722 MMSYN1_0722 MMSYN1_0722 857222 857314 + tRNA-Ser tRNA gene721 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0722 MMSYN1_0723 MMSYN1_0723 MMSYN1_0723 857337 857412 + tRNA-Met tRNA gene722 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0723 MMSYN1_0724 MMSYN1_0724 MMSYN1_0724 857415 857491 + tRNA-Asp tRNA gene723 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0724 MMSYN1_0725 MMSYN1_0725 MMSYN1_0725 857500 857575 + tRNA-Phe tRNA gene724 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0725 MMSYN1_0726 MMSYN1_0726 nagB nagB 857683 858417 + glucosamine-6-phosphate deaminase identified by match to protein family HMM PF01182%3B match to protein family HMM TIGR00502 gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0726 MMSYN1_0727 MMSYN1_0727 tpiA tpiA 858515 859261 + triose-phosphate isomerase identified by match to protein family HMM PF00121%3B match to protein family HMM TIGR00419 gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0727 MMSYN1_0728 MMSYN1_0728 MMSYN1_0728 859254 860090 + HAD-superfamily hydrolase subfamily IIB%2C protein identified by match to protein family HMM PF08282%3B match to protein family HMM TIGR01484 gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0728 MMSYN1_0729 MMSYN1_0729 gpmI gpmI 860093 861688 + 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase identified by match to protein family HMM PF01676%3B match to protein family HMM PF06415%3B match to protein family HMM TIGR01307 gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0729 MMSYN1_0730 MMSYN1_0730 MMSYN1_0730 861788 862387 + conserved hypothetical protein gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0730 MMSYN1_0731 MMSYN1_0731 MMSYN1_0731 862389 863402 + conserved hypothetical protein identified by match to protein family HMM PF08843 gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0731 MMSYN1_0732 MMSYN1_0732 deoC deoC 863454 864122 - deoxyribose-phosphate aldolase identified by match to protein family HMM PF01791%3B match to protein family HMM TIGR00126 gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0732 MMSYN1_0733 MMSYN1_0733 MMSYN1_0733 864134 865810 - phosphoglucomutase or phosphomannomutase identified by match to protein family HMM PF00408%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879 gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0733 MMSYN1_0734 MMSYN1_0734 pdp pdp 865972 867285 + pyrimidine-nucleoside phosphorylase identified by match to protein family HMM PF00591%3B match to protein family HMM PF02885%3B match to protein family HMM PF07831%3B match to protein family HMM TIGR02644 gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0734 MMSYN1_0735 MMSYN1_0735 tnpB_4 tnpB_4 867340 868071 - IS1296 transposase protein B identified by match to protein family HMM PF00665 gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0735 MMSYN1_0736 MMSYN1_0736 tnpA_4 tnpA_4 868209 868751 - IS1296 transposase protein A gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0736 MMSYN1_0737 MMSYN1_0737 MMSYN1_0737 868816 869103 - PTS system%2C fructose-specific iibc component%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0737 MMSYN1_0738 MMSYN1_0738 MMSYN1_0738 869142 869264 - hypothetical protein identified by glimmer%3B putative gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0738 MMSYN1_0739 MMSYN1_0739 MMSYN1_0739 869269 869403 - PTS system%2C fructose-specific family%2C iiabc components%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0739 MMSYN1_0740 MMSYN1_0740 MMSYN1_0740 869453 869608 - hypothetical protein identified by glimmer%3B putative gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0740 MMSYN1_0741 MMSYN1_0741 mmyCIIR mmyCIIR 869727 870719 - CCTTC-recognizing Type II restriction modification system (MmyCII) endonuclease subunit%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0741 MMSYN1_0742 MMSYN1_0742 mmyCIIM mmyCIIM 870721 873225 - CCTTC-recognizing Type II restriction modification system (MmyCII) adenine/cytosine DNA methyltransferase subunit identified by match to protein family HMM PF00145 gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0742 MMSYN1_0743 MMSYN1_0743 fruA fruA 873360 875396 - PTS system%2C Fructose specific IIB subunit family identified by match to protein family HMM PF00359%3B match to protein family HMM PF02378%3B match to protein family HMM PF02379%3B match to protein family HMM TIGR00829%3B match to protein family HMM TIGR00848%3B match to protein family HMM TIGR01427 gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0743 MMSYN1_0744 MMSYN1_0744 pfkB pfkB 875399 876334 - 1-phosphofructokinase identified by match to protein family HMM PF00294%3B match to protein family HMM TIGR03168%3B match to protein family HMM TIGR03828 gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0744 MMSYN1_0745 MMSYN1_0745 MMSYN1_0745 876334 877032 - transcriptional regulator of the fructose operon%2C DeoR family identified by match to protein family HMM PF00455%3B match to protein family HMM PF08220 gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0745 MMSYN1_0746 MMSYN1_0746 MMSYN1_0746 877185 878165 + conserved hypothetical protein gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0746 MMSYN1_0747 MMSYN1_0747 MMSYN1_0747 878368 879021 + purine nucleoside phosphorylase identified by match to protein family HMM PF01048 gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0747 MMSYN1_0748 MMSYN1_0748 MMSYN1_0748 879069 879533 - IS1296 transposase EH gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0748 MMSYN1_0749 MMSYN1_0749 MMSYN1_0749 879588 880493 - lysophospholipase identified by match to protein family HMM PF00561 gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0749 MMSYN1_0750 MMSYN1_0750 MMSYN1_0750 880596 883649 - viral A-type inclusion protein%2C putative gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0750 MMSYN1_0751 MMSYN1_0751 MMSYN1_0751 883674 886715 - viral A-type inclusion protein%2C putative gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0751 MMSYN1_0752 MMSYN1_0752 MMSYN1_0752 887085 887657 + cell filamentation protein (fic) identified by match to protein family HMM PF02661 gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0752 MMSYN1_0753 MMSYN1_0753 MMSYN1_0753 887865 888137 + DNA-damage-inducible protein J identified by match to protein family HMM PF04221%3B match to protein family HMM TIGR02384 gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0753 MMSYN1_0754 MMSYN1_0754 mmyCIIIM1 mmyCIIIM1 888176 889081 - GCATC--recognizing Type II restriction modification system (MmyCIII) adenine DNA methyltransferase subunit 1%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02086%3B match to protein family HMM TIGR00571 pseudogene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0754 MMSYN1_0755 MMSYN1_0755 mmyCIIIM2 mmyCIIIM2 889074 890162 - GCATC--recognizing Type II restriction modification system (MmyCIII) adenine DNA methyltransferase subunit 2 identified by match to protein family HMM PF02086 gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0755 MMSYN1_0756 MMSYN1_0756 mmyCIIIR mmyCIIIR 890279 892318 + GCATC--recognizing Type II restriction modification system (MmyCIII) endonuclease subunit identified by match to protein family HMM PF09491 gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0756 MMSYN1_0757 MMSYN1_0757 MMSYN1_0757 892356 893441 - conserved hypothetical protein identified by match to protein family HMM PF05913 gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0757 MMSYN1_0758 MMSYN1_0758 MMSYN1_0758 893443 894831 - beta-glucosidase identified by match to protein family HMM PF00232 gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0758 MMSYN1_0759 MMSYN1_0759 MMSYN1_0759 894824 895702 - sugar kinase%2C ROK family identified by match to protein family HMM PF00480 gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0759 MMSYN1_0760 MMSYN1_0760 MMSYN1_0760 895704 896162 - PTS system%2C fructose-specific IIA component identified by match to protein family HMM PF00359%3B match to protein family HMM TIGR00848 gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0760 MMSYN1_0761 MMSYN1_0761 MMSYN1_0761 896176 898842 - glycosyl hydrolase%2C family 38 identified by match to protein family HMM PF01074 gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0761 MMSYN1_0762 MMSYN1_0762 MMSYN1_0762 898854 900695 - PTS system%2C fructose-specific iibc component identified by match to protein family HMM PF02378%3B match to protein family HMM PF02379%3B match to protein family HMM TIGR00829%3B match to protein family HMM TIGR01427 gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0762 MMSYN1_0763 MMSYN1_0763 MMSYN1_0763 900710 901486 - putative liporotein gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0763 MMSYN1_0764 MMSYN1_0764 hpt_2 hpt_2 901652 902203 - hypoxanthine phosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01203 gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0764 MMSYN1_0765 MMSYN1_0765 purB purB 902239 903537 - adenylosuccinate lyase identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00928 gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0765 MMSYN1_0766 MMSYN1_0766 purA purA 903530 904828 - adenylosuccinate synthase identified by match to protein family HMM PF00709%3B match to protein family HMM TIGR00184 gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0766 MMSYN1_0767 MMSYN1_0767 MMSYN1_0767 905049 905201 - ribonucleoside-diphosphate reductase subunit alpha (Ribonucleotide reductase) gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0767 MMSYN1_0768 MMSYN1_0768 mmyCIVR mmyCIVR 905182 905697 - GANTC--recognizing Type II restriction modification system (MmyCIV) endonuclease subunit gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0768 MMSYN1_0769 MMSYN1_0769 mmyCIVM mmyCIVM 905859 906578 - GANTC--recognizing Type II restriction modification system (MmyCIV) adenine DNA methylase subunit identified by match to protein family HMM PF01555 gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0769 MMSYN1_0770 MMSYN1_0770 MMSYN1_0770 906639 907484 - conserved hypothetical protein identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0770 MMSYN1_0771 MMSYN1_0771 nrdE nrdE 907590 909752 - ribonucleoside-diphosphate reductase%2C alpha subunit identified by match to protein family HMM PF00317%3B match to protein family HMM PF02867%3B match to protein family HMM PF08343%3B match to protein family HMM TIGR02506 gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0771 MMSYN1_0772 MMSYN1_0772 nrdI nrdI 909739 910212 - NrdI protein identified by match to protein family HMM PF07972%3B match to protein family HMM TIGR00333 gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0772 MMSYN1_0773 MMSYN1_0773 nrdF nrdF 910221 911240 - ribonucleoside-diphosphate reductase%2C beta subunit identified by match to protein family HMM PF00268 gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0773 MMSYN1_0774 MMSYN1_0774 secG secG 911539 911823 + preprotein translocase%2C SecG subunit identified by match to protein family HMM TIGR00810 gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0774 MMSYN1_0775 MMSYN1_0775 MMSYN1_0775 911859 913973 + 3'-5' exoribonuclease%2C VacB/RNase II family identified by match to protein family HMM PF00575%3B match to protein family HMM PF00773%3B match to protein family HMM PF08206%3B match to protein family HMM TIGR00358 gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0775 MMSYN1_0776 MMSYN1_0776 smpB smpB 913983 914429 + SsrA-binding protein identified by match to protein family HMM PF01668%3B match to protein family HMM TIGR00086 gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0776 MMSYN1_0777 MMSYN1_0777 MMSYN1_0777 914429 914914 + conserved hypothetical protein gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0777 MMSYN1_0778 MMSYN1_0778 MMSYN1_0778 915034 915285 + conserved hypothetical protein gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0778 MMSYN1_0779 MMSYN1_0779 MMSYN1_0779 915336 917573 + PTS system%2C eiic domain protein identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826 gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0779 MMSYN1_0780 MMSYN1_0780 tnpA_5 tnpA_5 917651 918193 + IS1296 transposase protein A gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0780 MMSYN1_0781 MMSYN1_0781 tnpB_5 tnpB_5 918331 919062 + IS1296 transposase protein B identified by match to protein family HMM PF00665 gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0781 MMSYN1_0782 MMSYN1_0782 MMSYN1_0782 919157 920284 + beta-lactamase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00144 pseudogene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0782 MMSYN1_0783 MMSYN1_0783 MMSYN1_0783 920380 921345 + glucokinase identified by match to protein family HMM PF00480 gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0783 MMSYN1_0784 MMSYN1_0784 arcC_2 arcC_2 921413 922345 - carbamate kinase 1 identified by match to protein family HMM PF00696 gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0784 MMSYN1_0785 MMSYN1_0785 MMSYN1_0785 922358 923821 - arginine/ornithine antiporter identified by match to protein family HMM PF03606%3B match to protein family HMM PF06808 gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0785 MMSYN1_0786 MMSYN1_0786 arcB arcB 923900 924895 - ornithine carbamoyltransferase (ArcB) identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00658 gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0786 MMSYN1_0787 MMSYN1_0787 mgtA mgtA 925156 927984 - magnesium-importing ATPase identified by match to protein family HMM PF00122%3B match to protein family HMM PF00690%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01524 gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0787 MMSYN1_0788 MMSYN1_0788 MMSYN1_0788 928331 929518 + conserved hypothetical protein gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0788 MMSYN1_0789 MMSYN1_0789 atpC atpC 929590 929889 - ATP synthase%2C delta subunit identified by match to protein family HMM PF02823 gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0789 MMSYN1_0790 MMSYN1_0790 atpD_2 atpD_2 929889 931316 - ATP synthase F1%2C beta subunit identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM TIGR01039 gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0790 MMSYN1_0791 MMSYN1_0791 atpG atpG 931325 932167 - ATP synthase F1%2C gamma subunit identified by match to protein family HMM PF00231%3B match to protein family HMM TIGR01146 gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0791 MMSYN1_0792 MMSYN1_0792 atpA atpA 932169 933746 - ATP synthase F1%2C alpha subunit identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM PF09378%3B match to protein family HMM TIGR00962 gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0792 MMSYN1_0793 MMSYN1_0793 atpH atpH 933758 934303 - ATP synthase F1%2C delta subunit identified by match to protein family HMM PF00213%3B match to protein family HMM TIGR01145 gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0793 MMSYN1_0794 MMSYN1_0794 atpF atpF 934305 934850 - ATP synthase F0%2C B subunit identified by match to protein family HMM PF00430%3B match to protein family HMM TIGR01144 gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0794 MMSYN1_0795 MMSYN1_0795 atpE atpE 934879 935184 - ATP synthase c chain identified by match to protein family HMM PF00137%3B match to protein family HMM TIGR01260 gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0795 MMSYN1_0796 MMSYN1_0796 atpB atpB 935214 936077 - ATP synthase FO%2C A subunit identified by match to protein family HMM PF00119 gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0796 MMSYN1_0797 MMSYN1_0797 MMSYN1_0797 936077 936313 - conserved hypothetical protein gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0797 MMSYN1_0798 MMSYN1_0798 upp upp 936615 937238 - uracil phosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01091 gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0798 MMSYN1_0799 MMSYN1_0799 glyA glyA 937338 938579 - glycine hydroxymethyltransferase identified by match to protein family HMM PF00464 gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0799 MMSYN1_0800 MMSYN1_0800 rpiB rpiB 938563 939006 - ribose 5-phosphate isomerase B identified by match to protein family HMM PF02502%3B match to protein family HMM TIGR00689%3B match to protein family HMM TIGR01120 gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0800 MMSYN1_0801 MMSYN1_0801 MMSYN1_0801 939085 939381 + conserved hypothetical protein gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0801 MMSYN1_0802 MMSYN1_0802 MMSYN1_0802 939386 941581 - putative liporotein gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0802 MMSYN1_0803 MMSYN1_0803 rpoC rpoC 941671 945438 - DNA-directed RNA polymerase%2C beta' subunit identified by match to protein family HMM PF00623%3B match to protein family HMM PF04983%3B match to protein family HMM PF04997%3B match to protein family HMM PF04998%3B match to protein family HMM PF05000%3B match to protein family HMM TIGR02386 gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0803 MMSYN1_0804 MMSYN1_0804 rpoB rpoB 945450 949325 - DNA-directed RNA polymerase%2C beta subunit identified by match to protein family HMM PF00562%3B match to protein family HMM PF04560%3B match to protein family HMM PF04561%3B match to protein family HMM PF04563%3B match to protein family HMM PF04565%3B match to protein family HMM TIGR02013 gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0804 MMSYN1_0805 MMSYN1_0805 MMSYN1_0805 949315 950490 - conserved hypothetical protein gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0805 MMSYN1_0806 MMSYN1_0806 rplL rplL 950661 951029 - ribosomal protein L7/L12 identified by match to protein family HMM PF00542%3B match to protein family HMM TIGR00855 gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0806 MMSYN1_0807 MMSYN1_0807 rplJ rplJ 951098 951595 - 50S ribosomal protein L10 identified by match to protein family HMM PF00466 gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0807 MMSYN1_0809 MMSYN1_0809 rplA rplA 951822 952502 - ribosomal protein L1 identified by match to protein family HMM PF00687%3B match to protein family HMM TIGR01169 gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0809 MMSYN1_0810 MMSYN1_0810 rplK rplK 952502 952930 - ribosomal protein L11 identified by match to protein family HMM PF00298%3B match to protein family HMM PF03946%3B match to protein family HMM TIGR01632 gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0810 MMSYN1_0811 MMSYN1_0811 galU galU 953142 954020 - UTP-glucose-1-phosphate uridylyltransferase identified by match to protein family HMM PF00483 gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0811 MMSYN1_0812 MMSYN1_0812 MMSYN1_0812 954550 955926 - glycosyltransferase identified by match to protein family HMM PF00535 gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0812 MMSYN1_0813 MMSYN1_0813 galE galE 956226 957224 + UDP-glucose 4-epimerase identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01179 gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0813 MMSYN1_0814 MMSYN1_0814 glf glf 957238 958425 + UDP-galactopyranose mutase identified by match to protein family HMM PF03275%3B match to protein family HMM TIGR00031 gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0814 MMSYN1_0815 MMSYN1_0815 MMSYN1_0815 958511 958648 + conserved hypothetical protein gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0815 MMSYN1_0816 MMSYN1_0816 MMSYN1_0816 959695 960048 + integrase core domain protein gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0816 MMSYN1_0817 MMSYN1_0817 MMSYN1_0817 960185 961114 - conserved hypothetical protein identified by match to protein family HMM PF02650%3B match to protein family HMM TIGR00647 gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0817 MMSYN1_0818 MMSYN1_0818 MMSYN1_0818 961127 962557 - prolipoprotein diacylglyceryl transferase identified by match to protein family HMM PF01790 gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0818 MMSYN1_0819 MMSYN1_0819 trxB trxB 962566 963498 - thioredoxin-disulfide reductase identified by match to protein family HMM PF00070%3B match to protein family HMM PF01134%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01292 gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0819 MMSYN1_0820 MMSYN1_0820 MMSYN1_0820 963482 965062 - prolipoprotein diacylglyceryl transferase identified by match to protein family HMM PF01790 gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0820 MMSYN1_0821 MMSYN1_0821 hprK hprK 965073 966014 - HPr kinase/phosphorylase (HPrK/P) (HPr(Ser)kinase/phosphorylase) identified by match to protein family HMM PF02603%3B match to protein family HMM PF07475 gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0821 MMSYN1_0822 MMSYN1_0822 MMSYN1_0822 966098 966772 - putative membrane protein gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0822 MMSYN1_0823 MMSYN1_0823 folC folC 966789 967904 - folate synthetase-polyglutamyl folate synthetase identified by match to protein family HMM PF08245%3B match to protein family HMM TIGR01499 gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0823 MMSYN1_0824 MMSYN1_0824 uvrA uvrA 967897 970737 - excinuclease ABC subunit A identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00630 gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0824 MMSYN1_0825 MMSYN1_0825 uvrB uvrB 970746 972743 - excinuclease ABC subunit B identified by match to protein family HMM PF00271%3B match to protein family HMM PF02151%3B match to protein family HMM TIGR00631 gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0825 MMSYN1_0826 MMSYN1_0826 holA holA 973028 973978 + DNA polymerase III%2C delta subunit identified by match to protein family HMM PF06144%3B match to protein family HMM TIGR01128 gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0826 MMSYN1_0827 MMSYN1_0827 MMSYN1_0827 973981 975447 + conserved hypothetical protein gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0827 MMSYN1_0828 MMSYN1_0828 MMSYN1_0828 975613 975687 + tRNA-Cys tRNA gene828 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0828 MMSYN1_0829 MMSYN1_0829 MMSYN1_0829 975825 976622 + deoxyribonuclease%2C TatD family identified by match to protein family HMM PF01026%3B match to protein family HMM TIGR00010 gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0829 MMSYN1_0830 MMSYN1_0830 MMSYN1_0830 976624 976884 + conserved hypothetical protein gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0830 MMSYN1_0831 MMSYN1_0831 prs prs 977064 978098 + ribose-Phosphate pyrophosphokinase (rppk) (phosphoribosylpyrophosphate synthetase) (p-rib-pp synthetase) (prpp synthetase) identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01251 gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0831 MMSYN1_0832 MMSYN1_0832 pth pth 978524 979084 + aminoacyl-tRNA hydrolase identified by match to protein family HMM PF01195%3B match to protein family HMM TIGR00447 gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0832 MMSYN1_0833 MMSYN1_0833 rplI rplI 979205 979648 + ribosomal protein L9 identified by match to protein family HMM PF01281%3B match to protein family HMM PF03948%3B match to protein family HMM TIGR00158 gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0833 MMSYN1_0834 MMSYN1_0834 dnaB dnaB 979651 980967 + replicative DNA helicase identified by match to protein family HMM PF00772%3B match to protein family HMM PF03796%3B match to protein family HMM TIGR00665 gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0834 MMSYN1_0835 MMSYN1_0835 MMSYN1_0835 981034 982341 + putative liporotein gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0835 MMSYN1_0836 MMSYN1_0836 MMSYN1_0836 982483 983409 + conserved hypothetical protein gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0836 MMSYN1_0837 MMSYN1_0837 cysS cysS 983418 984743 + cysteine--tRNA ligase identified by match to protein family HMM PF01406%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00435 gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0837 MMSYN1_0838 MMSYN1_0838 MMSYN1_0838 984745 985479 + RNA methyltransferase%2C TrmH family%2C group 3 identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032%3B match to protein family HMM TIGR00186 gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0838 MMSYN1_0839 MMSYN1_0839 secE secE 985701 986024 + preprotein translocase%2C SecE subunit identified by match to protein family HMM TIGR00964 gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0839 MMSYN1_0840 MMSYN1_0840 nusG nusG 986041 986682 + transcription antitermination protein nusG identified by match to protein family HMM PF02357 gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0840 MMSYN1_0841 MMSYN1_0841 MMSYN1_0841 987122 993043 + hypothetical protein identified by glimmer%3B putative gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0841 MMSYN1_0842 MMSYN1_0842 MMSYN1_0842 993053 996010 + oligopeptide ABC transporter%2C solute-binding protein identified by match to protein family HMM PF00496 gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0842 MMSYN1_0843 MMSYN1_0843 MMSYN1_0843 996010 997083 + oligopeptide ABC transporter%2C permease component identified by match to protein family HMM PF00528 gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0843 MMSYN1_0844 MMSYN1_0844 MMSYN1_0844 997085 998095 + oligopeptide ABC transporter%2C permease component identified by match to protein family HMM PF00528 gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0844 MMSYN1_0845 MMSYN1_0845 MMSYN1_0845 998103 999548 + oligopeptide ABC transporter%2C ATP-binding component identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727 gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0845 MMSYN1_0846 MMSYN1_0846 MMSYN1_0846 999541 1000863 + oligopeptide ABC transporter%2C ATP-binding component identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352 gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0846 MMSYN1_0849 MMSYN1_0849 MMSYN1_0849 1002392 1002898 - lipoprotein gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0849 MMSYN1_0850 MMSYN1_0850 MMSYN1_0850 1003095 1003970 - conserved hypothetical protein identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0850 MMSYN1_0851 MMSYN1_0851 MMSYN1_0851 1004037 1004219 - putative liporotein gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0851 MMSYN1_0852 MMSYN1_0852 MMSYN1_0852 1004385 1004615 - conserved hypothetical protein gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0852 MMSYN1_0853 MMSYN1_0853 MMSYN1_0853 1004605 1005324 - conserved hypothetical protein gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0853 MMSYN1_0854 MMSYN1_0854 MMSYN1_0854 1005324 1005833 - conserved hypothetical protein gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0854 MMSYN1_0855 MMSYN1_0855 MMSYN1_0855 1005833 1007533 - PTS system%2C iibc component%2C putative identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378 gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0855 MMSYN1_0856 MMSYN1_0856 MMSYN1_0856 1007610 1009322 - PTS system%2C iibc component%2C putative identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378 gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0856 MMSYN1_0857 MMSYN1_0857 MMSYN1_0857 1011005 1011820 - SIS domain protein identified by match to protein family HMM PF01380 gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0857 MMSYN1_0858 MMSYN1_0858 MMSYN1_0858 1009630 1011018 + putative transcriptional regulator identified by match to protein family HMM PF04326%3B match to protein family HMM PF08220%3B match to protein family HMM PF08279 gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0858 MMSYN1_0859 MMSYN1_0859 MMSYN1_0859 1012008 1013969 + DNA topoisomerase domain protein identified by match to protein family HMM PF01131%3B match to protein family HMM PF01396%3B match to protein family HMM PF01751 gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0859 MMSYN1_0860 MMSYN1_0860 MMSYN1_0860 1014116 1014841 - putative liporotein gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0860 MMSYN1_0861 MMSYN1_0861 MMSYN1_0861 1015242 1016126 - conserved hypothetical protein gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0861 MMSYN1_0862 MMSYN1_0862 MMSYN1_0862 1016113 1016943 - conserved hypothetical protein gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0862 MMSYN1_0863 MMSYN1_0863 MMSYN1_0863 1016930 1018279 - putative liporotein gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0863 MMSYN1_0864 MMSYN1_0864 MMSYN1_0864 1018257 1018961 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0864 MMSYN1_0865 MMSYN1_0865 MMSYN1_0865 1018963 1020834 - ABC transporter%2C permease protein gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0865 MMSYN1_0866 MMSYN1_0866 MMSYN1_0866 1020973 1021860 - putative liporotein gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0866 MMSYN1_0867 MMSYN1_0867 MMSYN1_0867 1021862 1022692 - conserved hypothetical protein gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0867 MMSYN1_0868 MMSYN1_0868 MMSYN1_0868 1022679 1023872 - lipoprotein. putative gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0868 MMSYN1_0869 MMSYN1_0869 MMSYN1_0869 1023891 1025786 - ABC transporter%2C permease component gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0869 MMSYN1_0870 MMSYN1_0870 MMSYN1_0870 1025896 1027662 - C4-dicarboxylate anaerobic carrier superfamily identified by match to protein family HMM PF03606 gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0870 MMSYN1_0871 MMSYN1_0871 MMSYN1_0871 1027731 1028438 - zinc metalloprotease identified by match to protein family HMM PF01863 gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0871 MMSYN1_0872 MMSYN1_0872 ychF ychF 1028410 1029504 - GTP-binding protein YchF identified by match to protein family HMM PF01926%3B match to protein family HMM PF06071%3B match to protein family HMM TIGR00092 gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0872 MMSYN1_0873 MMSYN1_0873 MMSYN1_0873 1029540 1029740 - conserved hypothetical protein identified by match to protein family HMM PF06107 gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0873 MMSYN1_0874 MMSYN1_0874 gidB gidB 1029742 1030437 - 16S rRNA methyltransferase GidB identified by match to protein family HMM PF02527%3B match to protein family HMM TIGR00138 gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0874 MMSYN1_0875 MMSYN1_0875 pgsA pgsA 1030437 1031033 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase identified by match to protein family HMM PF01066%3B match to protein family HMM TIGR00560 gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0875 MMSYN1_0876 MMSYN1_0876 MMSYN1_0876 1031135 1032715 - amino acid permease gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0876 MMSYN1_0877 MMSYN1_0877 MMSYN1_0877 1032862 1033542 - putative membrane protein gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0877 MMSYN1_0878 MMSYN1_0878 MMSYN1_0878 1033514 1035007 - amino acid permease gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0878 MMSYN1_0879 MMSYN1_0879 MMSYN1_0879 1035110 1037767 - E1-E2 ATPase subfamily%2C putative identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494 gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0879 MMSYN1_0880 MMSYN1_0880 hup hup 1037851 1038822 - DNA-binding protein HU%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00216 pseudogene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0880 MMSYN1_0881 MMSYN1_0881 MMSYN1_0881 1039138 1040565 - hexose phosphate transport protein identified by match to protein family HMM PF07672%3B match to protein family HMM PF07690 gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0881 MMSYN1_0882 MMSYN1_0882 MMSYN1_0882 1040770 1041414 - conserved hypothetical protein gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0882 MMSYN1_0883 MMSYN1_0883 asnA asnA 1041471 1042451 - aspartate--ammonia ligase identified by match to protein family HMM PF03590%3B match to protein family HMM TIGR00669 gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0883 MMSYN1_0884 MMSYN1_0884 MMSYN1_0884 1042655 1043413 + conserved hypothetical protein gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0884 MMSYN1_0885 MMSYN1_0885 gidA gidA 1043673 1045562 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA identified by match to protein family HMM PF01134%3B match to protein family HMM TIGR00136 gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0885 MMSYN1_0886 MMSYN1_0886 MMSYN1_0886 1045710 1047287 - proton/glutamate symporter identified by match to protein family HMM PF00375 gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0886 MMSYN1_0887 MMSYN1_0887 MMSYN1_0887 1047307 1048650 - pyridine nucleotide-disulphide oxidoreductase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992 pseudogene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0887 MMSYN1_0888 MMSYN1_0888 MMSYN1_0888 1048868 1049368 + pyrazinamidase/nicotinamidase identified by match to protein family HMM PF00857 gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0888 MMSYN1_0889 MMSYN1_0889 MMSYN1_0889 1049414 1050091 - conserved hypothetical protein%2C authentic frameshift%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF08843 pseudogene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0889 MMSYN1_0890 MMSYN1_0890 MMSYN1_0890 1050248 1050847 - conserved hypothetical protein gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0890 MMSYN1_0891 MMSYN1_0891 lppQ lppQ 1051424 1052758 + lipoprotein Q%2C putative (LppQ) identified by match to protein family HMM PF03382%3B match to protein family HMM TIGR02167 gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0891 MMSYN1_0892 MMSYN1_0892 MMSYN1_0892 1053008 1054231 + putative membrane protein gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0892 MMSYN1_0893 MMSYN1_0893 MMSYN1_0893 1054362 1055567 + putative membrane protein gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0893 MMSYN1_0894 MMSYN1_0894 MMSYN1_0894 1055650 1057914 - viral A-type inclusion protein repeat protein gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0894 MMSYN1_0895 MMSYN1_0895 MMSYN1_0895 1057924 1060185 - conserved hypothetical protein gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0895 MMSYN1_0896 MMSYN1_0896 MMSYN1_0896 1060502 1062757 - conserved hypothetical protein gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0896 MMSYN1_0897 MMSYN1_0897 MMSYN1_0897 1062767 1065028 - conserved hypothetical protein gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0897 MMSYN1_0898 MMSYN1_0898 MMSYN1_0898 1065223 1067475 - conserved hypothetical protein gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0898 MMSYN1_0899 MMSYN1_0899 MMSYN1_0899 1067499 1069739 - conserved hypothetical protein gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0899 MMSYN1_0900 MMSYN1_0900 vlcF vlcF 1070055 1070690 + lipoprotein%2C putative (VlcF) gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0900 MMSYN1_0901 MMSYN1_0901 vlcG vlcG 1070923 1071534 + lipoprotein%2C putative (VlcG) gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0901 MMSYN1_0902 MMSYN1_0902 vlcH vlcH 1071824 1072303 + lipoprotein%2C putative (VlcH) gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0902 MMSYN1_0903 MMSYN1_0903 vlcI vlcI 1072804 1073379 + lipoprotein (VlcI) gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0903 MMSYN1_0904 MMSYN1_0904 vlcJ vlcJ 1073640 1074323 + prolipoprotein%2C putative (VlcJ) gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0904 MMSYN1_0905 MMSYN1_0905 MMSYN1_0905 1074592 1074750 - AAA family ATPase%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0905 MMSYN1_0906 MMSYN1_0906 MMSYN1_0906 1075251 1075967 - choline/ethanolamine kinase%2C putative identified by match to protein family HMM PF01633%3B match to protein family HMM PF01636 gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0906 MMSYN1_0907 MMSYN1_0907 MMSYN1_0907 1075967 1076761 - conserved hypothetical protein identified by match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484 gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0907 MMSYN1_0908 MMSYN1_0908 oxaA oxaA 1076838 1078028 - membrane protein OxaA identified by match to protein family HMM PF02096%3B match to protein family HMM TIGR03592 gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0908 MMSYN1_0909 MMSYN1_0909 rnpA rnpA 1078046 1078375 - ribonuclease P protein component identified by match to protein family HMM PF00825%3B match to protein family HMM TIGR00188 gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0909 MMSYN1_0910 MMSYN1_0910 rpmH rpmH 1078382 1078516 - ribosomal protein L34 identified by match to protein family HMM PF00468%3B match to protein family HMM TIGR01030 gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0910 MMSYN1_0913 MMSYN1_0913 tetM tetM 29270 31258 + Tn916%2C tetracycline resistance protein identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764 gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0913 MMSYN1_0914 MMSYN1_0914 bla bla 25426 26286 - beta-lactamase TEM (precursor) identified by match to protein family HMM PF00144 gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0914 MMSYN1_0915 MMSYN1_0915 lacZ lacZ 31535 34618 + beta-galactosidase%2C chain D identified by match to protein family HMM PF00703%3B match to protein family HMM PF02836%3B match to protein family HMM PF02929 gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0915 MMSYN1_0916 MMSYN1_0916 MMSYN1_0916 25111 25215 + RNAI RNAI%3B Rfam score 64.68 ncRNA gene16 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0916 MMSYN1_0917 MMSYN1_0917 MMSYN1_0917 26357 27529 - transposase%2C Mutator family identified by match to protein family HMM PF00872 gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0917 MMSYN1_0918 MMSYN1_0918 his3 his3 27639 28301 - imidazoleglycerol-phosphate dehydratase identified by match to protein family HMM PF00475 gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0918 MMSYN1_0921 MMSYN1_0921 tnpA_1 tnpA_1 35234 35776 + IS1296 transposase protein A gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0921 MMSYN1_0922 MMSYN1_0922 tnpB_1 tnpB_1 35914 36645 + IS1296 transposase protein B identified by match to protein family HMM PF00665 gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0922 MMSYN1_0923 MMSYN1_0923 MMSYN1_0923 122730 123332 - lipofamily protein gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0923 MMSYN1_0924 MMSYN1_0924 MMSYN1_0924 565789 566184 + conserved domain protein gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0924 MMSYN1_0925 MMSYN1_0925 MMSYN1_0925 724657 725553 - conserved domain protein gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0925 MMSYN1_0926 MMSYN1_0926 MMSYN1_0926 725660 726226 - hypothetical protein identified by glimmer%3B putative gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0926 MMSYN1_0927 MMSYN1_0927 MMSYN1_0927 726177 726560 + hypothetical protein identified by glimmer%3B putative gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0927 MMSYN1_0928 MMSYN1_0928 MMSYN1_0928 958936 959442 - hypothetical protein identified by glimmer%3B putative gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0928 MMSYN1_0929 MMSYN1_0929 MMSYN1_0929 959417 959686 + conserved domain protein gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=MMSYN1_0929