LOCUS HQ157199 4487 bp DNA circular ENV 19-MAY-2011 DEFINITION Uncultured Microviridae clone SARssphi1, complete genome. ACCESSION HQ157199 VERSION HQ157199.1 KEYWORDS ENV. SOURCE uncultured Microviridae ORGANISM uncultured Microviridae Viruses; ssDNA viruses; Microviridae; environmental samples. REFERENCE 1 (bases 1 to 4487) AUTHORS Tucker,K.P., Parsons,R., Symonds,E.M. and Breitbart,M. TITLE Diversity and distribution of single-stranded DNA phages in the North Atlantic Ocean JOURNAL ISME J 5 (5), 822-830 (2011) PUBMED 21124487 REFERENCE 2 (bases 1 to 4487) AUTHORS Tucker,K.P., Parsons,R., Symonds,E.M. and Breitbart,M. TITLE Direct Submission JOURNAL Submitted (18-AUG-2010) Mathematics and Natural Sciences, College of Coastal Georgia, 3700 Altama Avenue, Brunswick, GA 31520, USA FEATURES Location/Qualifiers source 1..4487 /organism="uncultured Microviridae" /mol_type="genomic DNA" /isolation_source="ocean" /db_xref="taxon:926697" /clone="SARssphi1" /environmental_sample /country="Atlantic Ocean: North Atlantic Ocean" /collection_date="Jun-2005" CDS 2..1603 /note="similar to Chlamydia phage 4 VP1" /codon_start=1 /transl_table=11 /product="putative major coat protein" /protein_id="ADR80653.1" /translation="MLGGPMGTLPTTLSHEFSRVPQADIQRSTFSRVHGLKTTFNSGD LIPIYVDEVLPGDTFQMNATGFGRLATPLYPVMDNMYVETFFFYVPNRIIWDNWEKFN GAQDDPNDSTDFLVPQIQSATVAEGSLFDYMGLPTQIAGIDFNNLHGRAYNLIWNEWF RDENLQDSLGVPKDDGPDTYTGYTIQKRGKRHDYFTSALPWPQKGDAVSLPLGTSADI HTAAAAGTDIGIYSVGSSDFRLLTSDPVEVALSGGTPPETNKMFADLSNATAATINQL REAFQIQRLYEKDARGGTRYTEILQSHFGVTSPDARLQRPEYLGGQKTEVMMQTVPQT SSTDSTSPQGNLAALGTATSRGGFSKSFVEHGVLIGLACVFADLTYQQGMNRMWSRRD RWDFYWPSLAHLGEQAVLNQEIYTQGTSADTQTFGYQERFAEYRYKPSQITGKMRSNA TGTLDAWHLAQDFTALPALNASFIEENPPVDRVIAVPSEPEFIWDWYFDLKTTRPMPV YSVPGLIDHFLGETWIDSSGRLLLA" CDS 1737..2399 /note="similar to Chlamydia phage phiCPG1 capsid protein VP2-related protein" /codon_start=1 /transl_table=11 /product="putative minor capsid protein" /protein_id="ADR80655.1" /translation="MVWPAIVGGLVAGYGQYKANRETRASTGRQMAFQERMSNTAYQR SMADMRKAGLNPILAAKLGGASTPQGASYTAQNIGSAAVQGYQAVSSAQQAQAQTRNI DTKTAIEQRTLKMLERENISMPEIQYTVKNIFGSKVLRSLEAAMSGDLSQAPSGAYRT LAGALRTKLVKHNILHGQMRRLSREDVITLINDVMELTEDIIGGVVSEQAKQFLKKIG IQ" CDS 2396..2833 /note="similar to Bdellovibrio phage phiMH2K" /codon_start=1 /transl_table=11 /product="putative minor capsid protein" /protein_id="ADR80654.1" /translation="MSKVVKFRTPYGDRTRVGFETTGESLTQQSHAAAADVRNIIKQY DKTGLIANVNKGIAQYGDYSEINEYAEALNMVREANEAFAEIPSHIREQFNNNAGLFF EFATNPKNKEEMIKMGLAEAPETVREEPAKSESAPPTPPAEGE" CDS 2903..4111 /note="similar to Chlamydia phage CPAR39 putative replication initiation protein PHA00330" /codon_start=1 /transl_table=11 /product="putative replication initiation protein" /protein_id="ADR80656.1" /translation="MFDVNYKVVQAKRSGDRTNWINVGMAFKREDKFSMKLDTYPIPN EKGEVWLQLYERIEDGISEENAKKQEQKRCSQKELWRFSLVTLLNQCGAEYGYNMACY HPLLAYKCDGKVVFNKPFAYAKGFNLPCGQCWGCRLQHSREWAIRCMHEAQMHDHNCF ITLTINPETLERRPRPWSLEKKEFQEFVHRLRRKIGKKIKYFHCGEYGDENKRPHYHA IIFGYDFPDKQLWERKLGNELYISPELENLWPHGYHRIGACTYESAHYVARYVMKRAK GEGPPEQYINPETGEVEYDLDNQYATMSRGNKKQPQNGIGNQWYWKYGWTDAHCHDYI VHDGIKMKVPRYYDKELEKYDPEYFQELKAKRKEQSPETIIEYNKAMDDLWVSEEIKI KKLERLVRNL" misc_feature 4170..4487 /note="similar to hypothetical protein" ORIGIN 1 tatgctcggc ggacctatgg gtaccctacc cacaacccta tcacatgaat ttagccgtgt 61 accacaggca gatattcaac ggagtacctt tagccgtgtk cacggyttaa aaaccacatt 121 taacagcggt gatttgatac cgatttatgt ggatgaggtc ctgccaggcg atacgtttca 181 gatgaacgca accggatttg gcagacttgc cacgccactg tacccagtaa tggataatat 241 gtatgtagaa acattctttt tctacgttcc aaataggatt atttgggata actgggagaa 301 attcaatggc gctcaggatg atccgaacga tagtacagat tttctagtac cacagataca 361 aagcgcaaca gtagcggaag gktccctatt cgattatatg ggtcttccga cacaaatagc 421 cggtatagat ttcaataatt tacatggacg cgcctacaac ctyatttgga atgaatggtt 481 tcgtgacgaa aaccttcaag attcccttgg agttccaaaa gacgatggtc cagacactta 541 cacaggttat acaattcaaa aacgtggcaa acgccacgat tacttcactt cggccttacc 601 ttggcctcag aaaggtgacg cagtttcact acccttaggc acgtctgctg atattcatac 661 ggcagcggca gccggtacgg atatyggaat atattcagtg ggaagttcgg acttccgact 721 attaacaagt gatccggtgg aggtagcgtt aagcggtggc actccacctg aaacaaacaa 781 gatgtttgca gatctatcaa atgcaacagc tgcaacaata aatcagttac gcgaagcgtt 841 tcaaattcag agactgtatg aaaaagacgc tcgaggcggt acaagatata ccgaaattct 901 acaatcacat ttcggagtaa cgtcacccga cgcaagacta caacgcccag aatatttggg 961 cggacagaaa acagaagtaa tgatgcagac agtaccgcaa acaagcagca ctgactcgac 1021 atcaccgcag ggtaacctag cagctttagg taccgcaacc tcgaggggcg gtttctcaaa 1081 atcatttgtc gagcatggcg tattaattgg tttggcgtgt gtatttgcag acctaacata 1141 ccagcaaggt atgaaccgaa tgtggtcaag acgtgatcgg tgggatttct attggccttc 1201 actagcgcat ttaggcgaac aggccgtact taaccaagaa atctacacac aaggtacatc 1261 ygccgataca caaaccttcg gatatcagga raggtttgca gaatayagat ayaagccctc 1321 acaaataacc ggaaagatgc gttcaaacgc aactggaacc ttggatgcgt ggcatctggc 1381 gcaggatttc actgcgctgc ccgctcttaa cgcatcgtty atcgaggaaa acccaccagt 1441 agatcgagta atagcagtac cttcagaacc agaatttatc tgggattggt atttcgatct 1501 caaaacaacc agacctatgc ccgtgtattc tgtccctggt ctaatagatc attttttagg 1561 tgaaacatgg atcgattcaa gtggacgatt attattggca taggccgtaa gtatgctttg 1621 cctgccctac tcggtacggc ggttacttgg ctggttgctc acaaccatgg tccttgggcc 1681 gatgttgtgt gtgctgttag cgaagcactt ttactcgtaa caccggagtg tcaataatgg 1741 tatggcctgc aatcgtcggc ggcttggtag ccggatatgg acaatataaa gctaatcgtg 1801 aaacaagagc cagtactggt cgacaratgg cctttcagga acgtatgtct aatacggcct 1861 atcagagaag tatggccgat atgcgtaaag caggcttaaa ccccatatta gcagcaaaac 1921 taggtggagc ttcgaccccg caaggcgcga gctacaccgc tcaaaatata ggatcagctg 1981 cagttcaggg ttatcaggca gtgtcatcag cacaacaagc gcaagcgcaa accagaaata 2041 ttgatacaaa aaccgctatc gagcaaagga cgttaaaaat gctcgaaagg gaaaatattt 2101 cgatgccgga aattcaatat acagtcaaaa atatttttgg atctaaggtg ctgagatctt 2161 tggaagcagc gatgtctggc gatctaagcc aagcaccttc cggagcatat agaactctcg 2221 ctggagcatt gcgaactaaa ttggttaaac acaatatttt gcatggtcaa atgcggagat 2281 taagtaggga ggacgtcatc acccttataa acgacgtaat ggagctcacc gaagatataa 2341 tcggtggagt agttagtgaa caagctaaac aatttttaaa gaaaataggt atccaatgag 2401 caaagtagta aaattcagaa caccgtatgg agatcgaacc cgtgtcgggt tcgaaacaac 2461 aggcgaaagc cttacccagc aatcacacgc cgctgctgcg gacgtacgta atataattaa 2521 gcaatatgac aaracyggtc ttattgccaa tgtaaataaa ggaatagccc agtatggcga 2581 ttattcggaa atcaatgaat atgcagaggc tcttaacatg gttcgtgaag cgaacgaagc 2641 ctttgcggaa attccgtctc acattcggga acaattcaac aataatgctg gattattttt 2701 cgagtttgcg accaatccga aaaataagga agaaatgata aaaatggggc ttgcagaagc 2761 accggaaacg gttcgggagg aaccggcaaa aagcgaatcc gcacctccca ctcctcctgc 2821 agagggggag taaggattcg cgggcacagt tacatgcttg atgttaactg tgcccactcg 2881 gacatccaat ggaggtaaag gtatgtttga cgtaaactac aaagttgtcc aggcgaaaag 2941 atctggagac aggaccaact ggataaacgt cggtatggcg tttaaacgag aagataagtt 3001 cagcatgaag ctggacacct acccgatacc aaacgagaaa ggcgaagttt ggttacagct 3061 ttacgaaagg attgaggatg gcatatcgga agaaaatgcg aaaaagcaag agcaaaaaag 3121 atgttcacaa aaagagctat ggcggttcag cctcgtaact ttgctaaacc aatgcggggc 3181 ggaatacggc tataatatgg catgttacca cccgctcctc gcctataaat gcgatggcaa 3241 agtkgtattt aataaaccct ttgcgtacgc aaagggtttt aatttgcctt gcggacaatg 3301 ttggggctgc cgcctccaac ayagtcgtga atgggctata agatgtatgc atgaagccca 3361 gatgcacgat cacaattgct tcataacttt aactataaac ccagagactc tagaacggcg 3421 ccctcgccca tggtctctgg aaaaaaaaga attccaagaa ttcgttcacc gattgaggcg 3481 taaaattgga aaaaaaatca aatattttca ttgcggcgaa tacggtgatg agaacaaacg 3541 cccccactac catgcgataa tattcgggta tgactttcca gacaaacaac tatgggaaag 3601 aaaactaggt aacgaattat atatatcacc cgaattagaa aacttatggc ctcatggata 3661 tcataggatt ggggcgtgta cttacgaaag tgctcattat gtagcacgtt atgtaatgaa 3721 aagagcgaaa ggggagggcc cccctgagca atatataaac ccagagacag gagaggtcga 3781 atatgacctc gataatcaat acgcgacaat gtcgcgtgga aacaaaaaac aaccccaaaa 3841 tggaattggt aatcaatggt attggaaata tggttggaca gacgctcact gtcacgatta 3901 catcgttcac gatgggataa aaatgaaagt tcctaggtay tatgataagg aactggaaaa 3961 atacgatcct gaatactttc aggaattgaa agcgaagcgg aaagaacagt caccagagac 4021 gataatagaa tataataagg ctatggatga cttatgggtg tccgaggaaa taaaaataaa 4081 aaaactcgaa cgattagttc gaaacttgta aaatgtcatg aaatgaatca tttacacgtt 4141 aacaagagcg ataacaaasc tatacataaa ctattgactt atattgtata ttatgcgtaa 4201 aattcccgtg caatattatt tcacgggaga tggaaatgca gaaagtttat tacgcagtat 4261 atgacagaaa ggctgagatg tactcacaac cctttctaga gattaaagat ggaaccgcag 4321 taagagcggt tcaagacata gtgatcaaca ataaggatca cgcattcgca aagcacccta 4381 gcgatttttc gcttcacaga ttgggtagct ttgacgaaac gaccggaata attaccggtc 4441 aggaaaaacc aaagaaaatt atcgaaatgg aaacattagg agactaa //